RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.61
FARP1-208ENST00000593548 PRDM9Q9NQV7 894 aa11.21□□□□□ -0.61
FARP1-208ENST00000593548 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
FARP1-208ENST00000593548 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
FARP1-208ENST00000593548 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
FARP1-208ENST00000593548 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
FARP1-208ENST00000593548 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
FARP1-208ENST00000593548 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
FARP1-208ENST00000593548 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
FARP1-208ENST00000593548 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
FARP1-208ENST00000593548 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
FARP1-208ENST00000593548 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
FARP1-208ENST00000593548 IL27Q8NEV9 243 aa11.17□□□□□ -0.62
FARP1-208ENST00000593548 SPTLC1O15269 473 aa11.16□□□□□ -0.62
FARP1-208ENST00000593548 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
FARP1-208ENST00000593548 PCDHB15Q9Y5E8 787 aa11.16□□□□□ -0.62
FARP1-208ENST00000593548 CLK2P49760 499 aaKnown RBP11.15□□□□□ -0.62
FARP1-208ENST00000593548 MTMR2Q13614 643 aa11.15□□□□□ -0.62
FARP1-208ENST00000593548 RETREG3Q86VR2 466 aa11.15□□□□□ -0.62
FARP1-208ENST00000593548 LIMD1Q9UGP4 676 aa11.15□□□□□ -0.62
FARP1-208ENST00000593548 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
FARP1-208ENST00000593548 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
FARP1-208ENST00000593548 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
FARP1-208ENST00000593548 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
FARP1-208ENST00000593548 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
FARP1-208ENST00000593548 FCF1Q9Y324 198 aaKnown RBP11.14□□□□□ -0.63
FARP1-208ENST00000593548 PLEKHG3A1L390 1219 aa11.13□□□□□ -0.63
FARP1-208ENST00000593548 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
FARP1-208ENST00000593548 GJA5P36382 358 aa11.12□□□□□ -0.63
FARP1-208ENST00000593548 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
FARP1-208ENST00000593548 TSC1Q92574 1164 aa11.12□□□□□ -0.63
FARP1-208ENST00000593548 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
FARP1-208ENST00000593548 RGS20O76081 388 aa11.11□□□□□ -0.63
FARP1-208ENST00000593548 HRCP23327 699 aa11.11□□□□□ -0.63
FARP1-208ENST00000593548 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
FARP1-208ENST00000593548 PRR7Q8TB68 274 aa11.11□□□□□ -0.63
FARP1-208ENST00000593548 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
FARP1-208ENST00000593548 JUNDP17535 347 aa11.09□□□□□ -0.63
FARP1-208ENST00000593548 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
FARP1-208ENST00000593548 QPCTQ16769 361 aa11.09□□□□□ -0.63
FARP1-208ENST00000593548 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
FARP1-208ENST00000593548 SLC19A1P41440 591 aa11.08□□□□□ -0.64
FARP1-208ENST00000593548 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
FARP1-208ENST00000593548 MMP16P51512 607 aa11.07□□□□□ -0.64
FARP1-208ENST00000593548 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
FARP1-208ENST00000593548 PRPF38BQ5VTL8 546 aaKnown RBP11.07□□□□□ -0.64
FARP1-208ENST00000593548 PROCA1Q8NCQ7 364 aaPredicted RBP11.07□□□□□ -0.64
FARP1-208ENST00000593548 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
FARP1-208ENST00000593548 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
FARP1-208ENST00000593548 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
FARP1-208ENST00000593548 LILRB3O75022 631 aa11.04□□□□□ -0.64
FARP1-208ENST00000593548 LIAT1Q6ZQX7 453 aa11.04□□□□□ -0.64
FARP1-208ENST00000593548 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
FARP1-208ENST00000593548 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
FARP1-208ENST00000593548 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
FARP1-208ENST00000593548 RTL5Q5HYW3 569 aaPredicted RBP11.03□□□□□ -0.64
FARP1-208ENST00000593548 HELBQ8NG08 1087 aaPredicted RBP11.01□□□□□ -0.65
FARP1-208ENST00000593548 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
FARP1-208ENST00000593548 CCNYL3P0C7X3 344 aa11□□□□□ -0.65
FARP1-208ENST00000593548 CTHP32929 405 aa10.99□□□□□ -0.65
FARP1-208ENST00000593548 PTPRNQ16849 979 aa10.99□□□□□ -0.65
FARP1-208ENST00000593548 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
FARP1-208ENST00000593548 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
FARP1-208ENST00000593548 ZNF697Q5TEC3 545 aa10.98□□□□□ -0.65
FARP1-208ENST00000593548 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
FARP1-208ENST00000593548 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
FARP1-208ENST00000593548 RPIAP49247 311 aa10.97□□□□□ -0.65
FARP1-208ENST00000593548 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
FARP1-208ENST00000593548 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
FARP1-208ENST00000593548 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
FARP1-208ENST00000593548 PER1O15534 1290 aaPredicted RBP10.95□□□□□ -0.66
FARP1-208ENST00000593548 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
FARP1-208ENST00000593548 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
FARP1-208ENST00000593548 AP1G2O75843 785 aa10.94□□□□□ -0.66
FARP1-208ENST00000593548 FOXC1Q12948 553 aa10.94□□□□□ -0.66
FARP1-208ENST00000593548 TRIM32Q13049 653 aa10.94□□□□□ -0.66
FARP1-208ENST00000593548 PTCRAQ6ISU1 281 aaPredicted RBP10.94□□□□□ -0.66
FARP1-208ENST00000593548 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
FARP1-208ENST00000593548 EVA1BQ9NVM1 165 aa10.93□□□□□ -0.66
FARP1-208ENST00000593548 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
FARP1-208ENST00000593548 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
FARP1-208ENST00000593548 MAP10Q9P2G4 905 aa10.92□□□□□ -0.66
FARP1-208ENST00000593548 PDZRN3Q9UPQ7 1066 aa10.92□□□□□ -0.66
FARP1-208ENST00000593548 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
FARP1-208ENST00000593548 GFRA3O60609 400 aa10.91□□□□□ -0.66
FARP1-208ENST00000593548 RFC5P40937 340 aa10.91□□□□□ -0.66
FARP1-208ENST00000593548 PPP2R2DQ66LE6 453 aa10.91□□□□□ -0.66
FARP1-208ENST00000593548 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
FARP1-208ENST00000593548 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
FARP1-208ENST00000593548 BAP1Q92560 729 aa10.87□□□□□ -0.67
FARP1-208ENST00000593548 F12P00748 615 aaPredicted RBP10.86□□□□□ -0.67
FARP1-208ENST00000593548 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
FARP1-208ENST00000593548 SKOR1P84550 965 aa10.84□□□□□ -0.67
FARP1-208ENST00000593548 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
FARP1-208ENST00000593548 GDF9O60383 454 aa10.83□□□□□ -0.68
FARP1-208ENST00000593548 WNT7BP56706 349 aa10.83□□□□□ -0.68
FARP1-208ENST00000593548 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
FARP1-208ENST00000593548 AGERQ15109 404 aa10.83□□□□□ -0.68
FARP1-208ENST00000593548 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
FARP1-208ENST00000593548 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms