RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 POGKQ9P215 609 aa17.42■□□□□ 0.38
CACNA1A-212ENST00000593160 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-212ENST00000593160 RALBP1Q15311 655 aa17.42■□□□□ 0.38
CACNA1A-212ENST00000593160 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
CACNA1A-212ENST00000593160 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
CACNA1A-212ENST00000593160 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-212ENST00000593160 BCANQ96GW7 911 aa17.41■□□□□ 0.38
CACNA1A-212ENST00000593160 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
CACNA1A-212ENST00000593160 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-212ENST00000593160 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 SLC26A8Q96RN1 970 aa17.39■□□□□ 0.37
CACNA1A-212ENST00000593160 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
CACNA1A-212ENST00000593160 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
CACNA1A-212ENST00000593160 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
CACNA1A-212ENST00000593160 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
CACNA1A-212ENST00000593160 CARD14Q9BXL6 1004 aa17.37■□□□□ 0.37
CACNA1A-212ENST00000593160 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
CACNA1A-212ENST00000593160 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-212ENST00000593160 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
CACNA1A-212ENST00000593160 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-212ENST00000593160 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
CACNA1A-212ENST00000593160 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
CACNA1A-212ENST00000593160 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
CACNA1A-212ENST00000593160 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
CACNA1A-212ENST00000593160 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-212ENST00000593160 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-212ENST00000593160 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
CACNA1A-212ENST00000593160 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.37
CACNA1A-212ENST00000593160 CDK19Q9BWU1 502 aa17.33■□□□□ 0.37
CACNA1A-212ENST00000593160 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
CACNA1A-212ENST00000593160 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
CACNA1A-212ENST00000593160 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
CACNA1A-212ENST00000593160 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-212ENST00000593160 ATP7BP35670 1465 aa17.3■□□□□ 0.36
CACNA1A-212ENST00000593160 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-212ENST00000593160 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
CACNA1A-212ENST00000593160 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
CACNA1A-212ENST00000593160 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CACNA1A-212ENST00000593160 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
CACNA1A-212ENST00000593160 KIF20BQ96Q89 1820 aa17.27■□□□□ 0.36
CACNA1A-212ENST00000593160 AKAP12Q02952 1782 aa17.27■□□□□ 0.36
CACNA1A-212ENST00000593160 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
CACNA1A-212ENST00000593160 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
CACNA1A-212ENST00000593160 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
CACNA1A-212ENST00000593160 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-212ENST00000593160 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
CACNA1A-212ENST00000593160 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
CACNA1A-212ENST00000593160 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
CACNA1A-212ENST00000593160 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
CACNA1A-212ENST00000593160 NSD2O96028 1365 aa17.25■□□□□ 0.35
CACNA1A-212ENST00000593160 KCNA6P17658 529 aa17.24■□□□□ 0.35
CACNA1A-212ENST00000593160 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-212ENST00000593160 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
CACNA1A-212ENST00000593160 PRR36Q9H6K5 1346 aa17.24■□□□□ 0.35
CACNA1A-212ENST00000593160 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
CACNA1A-212ENST00000593160 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
CACNA1A-212ENST00000593160 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
CACNA1A-212ENST00000593160 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
CACNA1A-212ENST00000593160 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
CACNA1A-212ENST00000593160 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
CACNA1A-212ENST00000593160 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
CACNA1A-212ENST00000593160 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-212ENST00000593160 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.34
CACNA1A-212ENST00000593160 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-212ENST00000593160 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-212ENST00000593160 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
CACNA1A-212ENST00000593160 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-212ENST00000593160 INSRP06213 1382 aa17.18■□□□□ 0.34
CACNA1A-212ENST00000593160 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
CACNA1A-212ENST00000593160 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-212ENST00000593160 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
CACNA1A-212ENST00000593160 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
CACNA1A-212ENST00000593160 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
CACNA1A-212ENST00000593160 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
CACNA1A-212ENST00000593160 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
CACNA1A-212ENST00000593160 STRCP1A6NGW2 1772 aa17.15■□□□□ 0.34
CACNA1A-212ENST00000593160 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.34
CACNA1A-212ENST00000593160 FYB1O15117 783 aa17.14■□□□□ 0.33
CACNA1A-212ENST00000593160 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
CACNA1A-212ENST00000593160 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
CACNA1A-212ENST00000593160 HSPA2P54652 639 aa17.11■□□□□ 0.33
CACNA1A-212ENST00000593160 USP6P35125 1406 aa17.11■□□□□ 0.33
CACNA1A-212ENST00000593160 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
CACNA1A-212ENST00000593160 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
CACNA1A-212ENST00000593160 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-212ENST00000593160 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-212ENST00000593160 ACEP12821 1306 aa17.09■□□□□ 0.33
CACNA1A-212ENST00000593160 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-212ENST00000593160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNA1A-212ENST00000593160 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-212ENST00000593160 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-212ENST00000593160 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
CACNA1A-212ENST00000593160 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
CACNA1A-212ENST00000593160 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms