RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TMEM132EQ6IEE7 984 aa30.39■■■□□ 2.46
TRIM47-207ENST00000593089 LRPPRCP42704 1394 aaKnown RBP30.39■■■□□ 2.45
TRIM47-207ENST00000593089 PIK3C2GO75747 1445 aa30.39■■■□□ 2.45
TRIM47-207ENST00000593089 WAPLQ7Z5K2 1190 aa30.38■■■□□ 2.45
TRIM47-207ENST00000593089 TECPR2O15040 1411 aa30.38■■■□□ 2.45
TRIM47-207ENST00000593089 KNDC1Q76NI1 1749 aa30.37■■■□□ 2.45
TRIM47-207ENST00000593089 ACIN1Q9UKV3 1341 aaKnown RBP30.37■■■□□ 2.45
TRIM47-207ENST00000593089 ESCO1Q5FWF5 840 aa30.36■■■□□ 2.45
TRIM47-207ENST00000593089 ADAMTS2O95450 1211 aa30.35■■■□□ 2.45
TRIM47-207ENST00000593089 ABCC11Q96J66 1382 aa30.33■■■□□ 2.45
TRIM47-207ENST00000593089 PLEKHH1Q9ULM0 1364 aa30.33■■■□□ 2.45
TRIM47-207ENST00000593089 NUTM2FA1L443 756 aa30.32■■■□□ 2.44
TRIM47-207ENST00000593089 YTHDC2Q9H6S0 1430 aaKnown RBP30.31■■■□□ 2.44
TRIM47-207ENST00000593089 RAB3GAP2Q9H2M9 1393 aa30.31■■■□□ 2.44
TRIM47-207ENST00000593089 NGLY1Q96IV0 654 aa30.31■■■□□ 2.44
TRIM47-207ENST00000593089 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
TRIM47-207ENST00000593089 NPHP3Q7Z494 1330 aa30.29■■■□□ 2.44
TRIM47-207ENST00000593089 QTRT2Q9H974 415 aaKnown RBP30.29■■■□□ 2.44
TRIM47-207ENST00000593089 COL22A1Q8NFW1 1626 aaPredicted RBP30.28■■■□□ 2.44
TRIM47-207ENST00000593089 UPF1Q92900 1129 aaKnown RBP eCLIP30.27■■■□□ 2.44
TRIM47-207ENST00000593089 PXDNQ92626 1479 aa30.26■■■□□ 2.44
TRIM47-207ENST00000593089 FOXO3O43524 673 aa30.26■■■□□ 2.43
TRIM47-207ENST00000593089 XPCQ01831 940 aaPredicted RBP30.26■■■□□ 2.43
TRIM47-207ENST00000593089 C14orf93Q9H972 538 aaKnown RBP30.26■■■□□ 2.43
TRIM47-207ENST00000593089 FMN2Q9NZ56 1722 aa30.26■■■□□ 2.43
TRIM47-207ENST00000593089 MYOM2P54296 1465 aa30.25■■■□□ 2.43
TRIM47-207ENST00000593089 NRXN1Q9ULB1 1477 aa30.25■■■□□ 2.43
TRIM47-207ENST00000593089 RBM6P78332 1123 aaKnown RBP30.24■■■□□ 2.43
TRIM47-207ENST00000593089 CFAP70Q5T0N1 1121 aa30.24■■■□□ 2.43
TRIM47-207ENST00000593089 RGS12O14924 1447 aa30.22■■■□□ 2.43
TRIM47-207ENST00000593089 DHX57Q6P158 1386 aaKnown RBP30.2■■■□□ 2.43
TRIM47-207ENST00000593089 USP21Q9UK80 565 aa30.2■■■□□ 2.43
TRIM47-207ENST00000593089 SIRT1Q96EB6 747 aa30.19■■■□□ 2.42
TRIM47-207ENST00000593089 KIF1AQ12756 1690 aa30.17■■■□□ 2.42
TRIM47-207ENST00000593089 RGPD8O14715 1765 aaPredicted RBP30.16■■■□□ 2.42
TRIM47-207ENST00000593089 SAFB2Q14151 953 aaKnown RBP eCLIP30.15■■■□□ 2.42
TRIM47-207ENST00000593089 MARF1Q9Y4F3 1742 aaKnown RBP30.15■■■□□ 2.42
TRIM47-207ENST00000593089 FNBP4Q8N3X1 1017 aaPredicted RBP30.14■■■□□ 2.42
TRIM47-207ENST00000593089 PRAM1Q96QH2 718 aa30.13■■■□□ 2.41
TRIM47-207ENST00000593089 TRPC5Q9UL62 973 aaPredicted RBP30.13■■■□□ 2.41
TRIM47-207ENST00000593089 SPATA31A3Q5VYP0 1347 aa30.09■■■□□ 2.41
TRIM47-207ENST00000593089 KRT28Q7Z3Y7 464 aa30.09■■■□□ 2.41
TRIM47-207ENST00000593089 DLC1Q96QB1 1528 aa30.08■■■□□ 2.41
TRIM47-207ENST00000593089 ATRNO75882 1429 aa30.08■■■□□ 2.41
TRIM47-207ENST00000593089 POGKQ9P215 609 aa30.08■■■□□ 2.41
TRIM47-207ENST00000593089 KDM2AQ9Y2K7 1162 aa30.08■■■□□ 2.41
TRIM47-207ENST00000593089 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
TRIM47-207ENST00000593089 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
TRIM47-207ENST00000593089 DCAF11Q8TEB1 546 aa30.05■■■□□ 2.4
TRIM47-207ENST00000593089 BCL9LQ86UU0 1499 aa30.05■■■□□ 2.4
TRIM47-207ENST00000593089 TRAK1Q9UPV9 953 aa30.03■■■□□ 2.4
TRIM47-207ENST00000593089 USP32Q8NFA0 1604 aa30.01■■■□□ 2.39
TRIM47-207ENST00000593089 PSME1Q06323 249 aa30.01■■■□□ 2.39
TRIM47-207ENST00000593089 ADGRB2O60241 1585 aa30■■■□□ 2.39
TRIM47-207ENST00000593089 TNS3Q68CZ2 1445 aa30■■■□□ 2.39
TRIM47-207ENST00000593089 HRCP23327 699 aa30■■■□□ 2.39
TRIM47-207ENST00000593089 PLEKHG5O94827 1062 aa29.98■■■□□ 2.39
TRIM47-207ENST00000593089 PMFBP1Q8TBY8 1022 aa29.98■■■□□ 2.39
TRIM47-207ENST00000593089 HIRIP3Q9BW71 556 aaPredicted RBP29.98■■■□□ 2.39
TRIM47-207ENST00000593089 ATAD2Q6PL18 1390 aa29.98■■■□□ 2.39
TRIM47-207ENST00000593089 ANKARQ7Z5J8 1434 aa29.97■■■□□ 2.39
TRIM47-207ENST00000593089 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.97■■■□□ 2.39
TRIM47-207ENST00000593089 HAP1P54257 671 aaPredicted RBP29.97■■■□□ 2.39
TRIM47-207ENST00000593089 MINK1Q8N4C8 1332 aaPredicted RBP29.96■■■□□ 2.39
TRIM47-207ENST00000593089 LMOD2Q6P5Q4 547 aa29.96■■■□□ 2.39
TRIM47-207ENST00000593089 CABLES1Q8TDN4 633 aa29.95■■■□□ 2.39
TRIM47-207ENST00000593089 GJD4Q96KN9 370 aaPredicted RBP29.95■■■□□ 2.39
TRIM47-207ENST00000593089 SBNO1A3KN83 1393 aa29.94■■■□□ 2.38
TRIM47-207ENST00000593089 SLIT2O94813 1529 aa29.94■■■□□ 2.38
TRIM47-207ENST00000593089 UNC5CLQ8IV45 518 aa29.93■■■□□ 2.38
TRIM47-207ENST00000593089 STAC3Q96MF2 364 aa29.93■■■□□ 2.38
TRIM47-207ENST00000593089 ABCA3Q99758 1704 aa29.91■■■□□ 2.38
TRIM47-207ENST00000593089 ARHGEF10O15013 1369 aa29.9■■■□□ 2.38
TRIM47-207ENST00000593089 GLI3P10071 1580 aa29.89■■■□□ 2.38
TRIM47-207ENST00000593089 EIF3AQ14152 1382 aaKnown RBP29.89■■■□□ 2.37
TRIM47-207ENST00000593089 TULP4Q9NRJ4 1543 aa29.88■■■□□ 2.37
TRIM47-207ENST00000593089 PRR36Q9H6K5 1346 aa29.88■■■□□ 2.37
TRIM47-207ENST00000593089 ARHGEF28Q8N1W1 1705 aaKnown RBP29.88■■■□□ 2.37
TRIM47-207ENST00000593089 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
TRIM47-207ENST00000593089 PLCH1Q4KWH8 1693 aa29.87■■■□□ 2.37
TRIM47-207ENST00000593089 TRPM3Q9HCF6 1732 aaPredicted RBP29.87■■■□□ 2.37
TRIM47-207ENST00000593089 WASLO00401 505 aaPredicted RBP29.86■■■□□ 2.37
TRIM47-207ENST00000593089 GPRASP1Q5JY77 1395 aa29.84■■■□□ 2.37
TRIM47-207ENST00000593089 NWD2Q9ULI1 1742 aa29.82■■■□□ 2.36
TRIM47-207ENST00000593089 ALS2Q96Q42 1657 aa29.81■■■□□ 2.36
TRIM47-207ENST00000593089 NGDNQ8NEJ9 315 aaKnown RBP29.79■■■□□ 2.36
TRIM47-207ENST00000593089 CCDC9Q9Y3X0 531 aaKnown RBP29.79■■■□□ 2.36
TRIM47-207ENST00000593089 VPS72Q15906 364 aa29.78■■■□□ 2.36
TRIM47-207ENST00000593089 BRWD3Q6RI45 1802 aa29.78■■■□□ 2.36
TRIM47-207ENST00000593089 ITSN1Q15811 1721 aa29.77■■■□□ 2.36
TRIM47-207ENST00000593089 FAM83GA6ND36 823 aa29.77■■■□□ 2.36
TRIM47-207ENST00000593089 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
TRIM47-207ENST00000593089 ATP7BP35670 1465 aa29.74■■■□□ 2.35
TRIM47-207ENST00000593089 EP400Q96L91 3159 aa29.74■■■□□ 2.35
TRIM47-207ENST00000593089 PAK3O75914 559 aaPredicted RBP29.74■■■□□ 2.35
TRIM47-207ENST00000593089 CCDC125Q86Z20 511 aa29.73■■■□□ 2.35
TRIM47-207ENST00000593089 SEPT12Q8IYM1 358 aa29.73■■■□□ 2.35
TRIM47-207ENST00000593089 NUDT16Q96DE0 195 aaKnown RBP29.73■■■□□ 2.35
TRIM47-207ENST00000593089 NRAPQ86VF7 1730 aa29.71■■■□□ 2.35
TRIM47-207ENST00000593089 CRYBG1Q9Y4K1 1723 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms