RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
PRKCSH-218ENST00000593053 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-218ENST00000593053 YTHDC2Q9H6S0 1430 aaKnown RBP19.23■□□□□ 0.67
PRKCSH-218ENST00000593053 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
PRKCSH-218ENST00000593053 NHSL1Q5SYE7 1610 aa19.22■□□□□ 0.67
PRKCSH-218ENST00000593053 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
PRKCSH-218ENST00000593053 SHPRHQ149N8 1683 aa19.21■□□□□ 0.67
PRKCSH-218ENST00000593053 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
PRKCSH-218ENST00000593053 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-218ENST00000593053 NUTM2FA1L443 756 aa19.18■□□□□ 0.66
PRKCSH-218ENST00000593053 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
PRKCSH-218ENST00000593053 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
PRKCSH-218ENST00000593053 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
PRKCSH-218ENST00000593053 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
PRKCSH-218ENST00000593053 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
PRKCSH-218ENST00000593053 SOS2Q07890 1332 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-218ENST00000593053 KNDC1Q76NI1 1749 aa19.15■□□□□ 0.66
PRKCSH-218ENST00000593053 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
PRKCSH-218ENST00000593053 LAMC1P11047 1609 aa19.14■□□□□ 0.65
PRKCSH-218ENST00000593053 SAFB2Q14151 953 aaKnown RBP eCLIP19.13■□□□□ 0.65
PRKCSH-218ENST00000593053 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
PRKCSH-218ENST00000593053 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
PRKCSH-218ENST00000593053 FOXO3O43524 673 aa19.12■□□□□ 0.65
PRKCSH-218ENST00000593053 AFF2P51816 1311 aa19.11■□□□□ 0.65
PRKCSH-218ENST00000593053 XPCQ01831 940 aaPredicted RBP19.11■□□□□ 0.65
PRKCSH-218ENST00000593053 STAC3Q96MF2 364 aa19.1■□□□□ 0.65
PRKCSH-218ENST00000593053 C8orf37Q96NL8 207 aa19.1■□□□□ 0.65
PRKCSH-218ENST00000593053 POGKQ9P215 609 aa19.1■□□□□ 0.65
PRKCSH-218ENST00000593053 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
PRKCSH-218ENST00000593053 ADAMTS2O95450 1211 aa19.09■□□□□ 0.65
PRKCSH-218ENST00000593053 ADGRB1O14514 1584 aa19.09■□□□□ 0.65
PRKCSH-218ENST00000593053 DLC1Q96QB1 1528 aa19.07■□□□□ 0.64
PRKCSH-218ENST00000593053 PXDNQ92626 1479 aa19.07■□□□□ 0.64
PRKCSH-218ENST00000593053 FMN2Q9NZ56 1722 aa19.05■□□□□ 0.64
PRKCSH-218ENST00000593053 RXRBP28702 533 aa19.05■□□□□ 0.64
PRKCSH-218ENST00000593053 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
PRKCSH-218ENST00000593053 HIRIP3Q9BW71 556 aaPredicted RBP19.04■□□□□ 0.64
PRKCSH-218ENST00000593053 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
PRKCSH-218ENST00000593053 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
PRKCSH-218ENST00000593053 KRT28Q7Z3Y7 464 aa19.02■□□□□ 0.64
PRKCSH-218ENST00000593053 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-218ENST00000593053 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
PRKCSH-218ENST00000593053 KIF1AQ12756 1690 aa19■□□□□ 0.63
PRKCSH-218ENST00000593053 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
PRKCSH-218ENST00000593053 ANKARQ7Z5J8 1434 aa18.99■□□□□ 0.63
PRKCSH-218ENST00000593053 PMFBP1Q8TBY8 1022 aa18.98■□□□□ 0.63
PRKCSH-218ENST00000593053 USP21Q9UK80 565 aa18.98■□□□□ 0.63
PRKCSH-218ENST00000593053 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PRKCSH-218ENST00000593053 PSME1Q06323 249 aa18.97■□□□□ 0.63
PRKCSH-218ENST00000593053 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
PRKCSH-218ENST00000593053 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
PRKCSH-218ENST00000593053 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
PRKCSH-218ENST00000593053 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
PRKCSH-218ENST00000593053 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
PRKCSH-218ENST00000593053 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
PRKCSH-218ENST00000593053 TNS3Q68CZ2 1445 aa18.94■□□□□ 0.62
PRKCSH-218ENST00000593053 USP32Q8NFA0 1604 aa18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 LMOD2Q6P5Q4 547 aa18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
PRKCSH-218ENST00000593053 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-218ENST00000593053 TULP4Q9NRJ4 1543 aa18.92■□□□□ 0.62
PRKCSH-218ENST00000593053 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
PRKCSH-218ENST00000593053 RGS12O14924 1447 aa18.91■□□□□ 0.62
PRKCSH-218ENST00000593053 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
PRKCSH-218ENST00000593053 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
PRKCSH-218ENST00000593053 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
PRKCSH-218ENST00000593053 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
PRKCSH-218ENST00000593053 ARHGEF28Q8N1W1 1705 aaKnown RBP18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 GPRASP1Q5JY77 1395 aa18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 ATRNO75882 1429 aa18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 BCL9LQ86UU0 1499 aa18.89■□□□□ 0.61
PRKCSH-218ENST00000593053 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-218ENST00000593053 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-218ENST00000593053 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
PRKCSH-218ENST00000593053 KIAA1210Q9ULL0 1709 aa18.87■□□□□ 0.61
PRKCSH-218ENST00000593053 ATP7BP35670 1465 aa18.85■□□□□ 0.61
PRKCSH-218ENST00000593053 SLIT2O94813 1529 aa18.84■□□□□ 0.61
PRKCSH-218ENST00000593053 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
PRKCSH-218ENST00000593053 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-218ENST00000593053 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.6
PRKCSH-218ENST00000593053 GJD4Q96KN9 370 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-218ENST00000593053 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-218ENST00000593053 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
PRKCSH-218ENST00000593053 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-218ENST00000593053 FAM83GA6ND36 823 aa18.79■□□□□ 0.6
PRKCSH-218ENST00000593053 SRPK2P78362 688 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-218ENST00000593053 ACEP12821 1306 aa18.78■□□□□ 0.6
PRKCSH-218ENST00000593053 ATAD2Q6PL18 1390 aa18.78■□□□□ 0.6
PRKCSH-218ENST00000593053 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-218ENST00000593053 ALS2Q96Q42 1657 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms