RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
CACNA1A-211ENST00000592864 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
CACNA1A-211ENST00000592864 HSPA5P11021 654 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-211ENST00000592864 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
CACNA1A-211ENST00000592864 QRICH2Q9H0J4 1663 aa19.54■□□□□ 0.72
CACNA1A-211ENST00000592864 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
CACNA1A-211ENST00000592864 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
CACNA1A-211ENST00000592864 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
CACNA1A-211ENST00000592864 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
CACNA1A-211ENST00000592864 XIRP1Q702N8 1843 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-211ENST00000592864 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
CACNA1A-211ENST00000592864 SBNO2Q9Y2G9 1366 aa19.51■□□□□ 0.71
CACNA1A-211ENST00000592864 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-211ENST00000592864 MINK1Q8N4C8 1332 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-211ENST00000592864 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-211ENST00000592864 ADGRL3Q9HAR2 1447 aa19.5■□□□□ 0.71
CACNA1A-211ENST00000592864 MSH6P52701 1360 aa19.49■□□□□ 0.71
CACNA1A-211ENST00000592864 NALCNQ8IZF0 1738 aa19.48■□□□□ 0.71
CACNA1A-211ENST00000592864 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
CACNA1A-211ENST00000592864 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-211ENST00000592864 TMF1P82094 1093 aa19.47■□□□□ 0.71
CACNA1A-211ENST00000592864 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
CACNA1A-211ENST00000592864 TESK2Q96S53 571 aa19.47■□□□□ 0.71
CACNA1A-211ENST00000592864 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
CACNA1A-211ENST00000592864 ATF3P18847 181 aa19.46■□□□□ 0.71
CACNA1A-211ENST00000592864 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
CACNA1A-211ENST00000592864 HIRIP3Q9BW71 556 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-211ENST00000592864 DCCP43146 1447 aa19.45■□□□□ 0.7
CACNA1A-211ENST00000592864 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-211ENST00000592864 PIP4K2BP78356 416 aa19.45■□□□□ 0.7
CACNA1A-211ENST00000592864 CADPS2Q86UW7 1296 aa19.45■□□□□ 0.7
CACNA1A-211ENST00000592864 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
CACNA1A-211ENST00000592864 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-211ENST00000592864 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
CACNA1A-211ENST00000592864 SRPK2P78362 688 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-211ENST00000592864 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
CACNA1A-211ENST00000592864 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.69
CACNA1A-211ENST00000592864 TOM1O60784 492 aa19.38■□□□□ 0.69
CACNA1A-211ENST00000592864 HSPA1LP34931 641 aa19.37■□□□□ 0.69
CACNA1A-211ENST00000592864 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
CACNA1A-211ENST00000592864 SOCS7O14512 581 aa19.36■□□□□ 0.69
CACNA1A-211ENST00000592864 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-211ENST00000592864 CABP2Q9NPB3 220 aa19.36■□□□□ 0.69
CACNA1A-211ENST00000592864 SLAIN2Q9P270 581 aa19.36■□□□□ 0.69
CACNA1A-211ENST00000592864 ATAD2Q6PL18 1390 aa19.35■□□□□ 0.69
CACNA1A-211ENST00000592864 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
CACNA1A-211ENST00000592864 CCDC61Q9Y6R9 512 aa19.34■□□□□ 0.69
CACNA1A-211ENST00000592864 RGPD8O14715 1765 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-211ENST00000592864 NUTM2FA1L443 756 aa19.33■□□□□ 0.69
CACNA1A-211ENST00000592864 MST1RQ04912 1400 aa19.33■□□□□ 0.68
CACNA1A-211ENST00000592864 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
CACNA1A-211ENST00000592864 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-211ENST00000592864 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-211ENST00000592864 USP32Q8NFA0 1604 aa19.31■□□□□ 0.68
CACNA1A-211ENST00000592864 ATP7BP35670 1465 aa19.3■□□□□ 0.68
CACNA1A-211ENST00000592864 NINLQ9Y2I6 1382 aa19.3■□□□□ 0.68
CACNA1A-211ENST00000592864 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
CACNA1A-211ENST00000592864 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
CACNA1A-211ENST00000592864 PRR36Q9H6K5 1346 aa19.3■□□□□ 0.68
CACNA1A-211ENST00000592864 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
CACNA1A-211ENST00000592864 CCDC7Q96M83 1385 aa19.29■□□□□ 0.68
CACNA1A-211ENST00000592864 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-211ENST00000592864 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
CACNA1A-211ENST00000592864 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.68
CACNA1A-211ENST00000592864 KIF1AQ12756 1690 aa19.27■□□□□ 0.67
CACNA1A-211ENST00000592864 ORAI2Q96SN7 254 aa19.26■□□□□ 0.67
CACNA1A-211ENST00000592864 NGDNQ8NEJ9 315 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-211ENST00000592864 ZNF692Q9BU19 519 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-211ENST00000592864 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
CACNA1A-211ENST00000592864 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
CACNA1A-211ENST00000592864 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
CACNA1A-211ENST00000592864 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-211ENST00000592864 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
CACNA1A-211ENST00000592864 ACEP12821 1306 aa19.22■□□□□ 0.67
CACNA1A-211ENST00000592864 MYOM1P52179 1685 aa19.21■□□□□ 0.67
CACNA1A-211ENST00000592864 ROBO1Q9Y6N7 1651 aa19.21■□□□□ 0.67
CACNA1A-211ENST00000592864 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-211ENST00000592864 PSME1Q06323 249 aa19.21■□□□□ 0.67
CACNA1A-211ENST00000592864 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
CACNA1A-211ENST00000592864 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
CACNA1A-211ENST00000592864 FOXO3O43524 673 aa19.19■□□□□ 0.66
CACNA1A-211ENST00000592864 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-211ENST00000592864 ANKRD36BQ8N2N9 1353 aa19.19■□□□□ 0.66
CACNA1A-211ENST00000592864 CPSF1Q10570 1443 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-211ENST00000592864 KTN1Q86UP2 1357 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-211ENST00000592864 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
CACNA1A-211ENST00000592864 PANK3Q9H999 370 aa19.16■□□□□ 0.66
CACNA1A-211ENST00000592864 NHSL1Q5SYE7 1610 aa19.16■□□□□ 0.66
CACNA1A-211ENST00000592864 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
CACNA1A-211ENST00000592864 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.66
CACNA1A-211ENST00000592864 A0A1W2PP64 1363 aa19.14■□□□□ 0.65
CACNA1A-211ENST00000592864 AHDC1Q5TGY3 1603 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-211ENST00000592864 USP6P35125 1406 aa19.13■□□□□ 0.65
CACNA1A-211ENST00000592864 DDX10Q13206 875 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-211ENST00000592864 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms