RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
TPM4-216ENST00000592822 POGKQ9P215 609 aa14.18□□□□□ -0.14
TPM4-216ENST00000592822 DCCP43146 1447 aa14.17□□□□□ -0.14
TPM4-216ENST00000592822 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
TPM4-216ENST00000592822 ATF3P18847 181 aa14.16□□□□□ -0.14
TPM4-216ENST00000592822 CARD11Q9BXL7 1154 aa14.16□□□□□ -0.14
TPM4-216ENST00000592822 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
TPM4-216ENST00000592822 CADPS2Q86UW7 1296 aa14.15□□□□□ -0.14
TPM4-216ENST00000592822 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
TPM4-216ENST00000592822 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
TPM4-216ENST00000592822 MST1RQ04912 1400 aa14.14□□□□□ -0.15
TPM4-216ENST00000592822 ADGRB2O60241 1585 aa14.13□□□□□ -0.15
TPM4-216ENST00000592822 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
TPM4-216ENST00000592822 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
TPM4-216ENST00000592822 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
TPM4-216ENST00000592822 FMN2Q9NZ56 1722 aa14.12□□□□□ -0.15
TPM4-216ENST00000592822 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
TPM4-216ENST00000592822 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
TPM4-216ENST00000592822 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
TPM4-216ENST00000592822 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
TPM4-216ENST00000592822 EIF3AQ14152 1382 aaKnown RBP14.1□□□□□ -0.15
TPM4-216ENST00000592822 C1orf167Q5SNV9 1468 aa14.09□□□□□ -0.15
TPM4-216ENST00000592822 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
TPM4-216ENST00000592822 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
TPM4-216ENST00000592822 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
TPM4-216ENST00000592822 USP32Q8NFA0 1604 aa14.08□□□□□ -0.16
TPM4-216ENST00000592822 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
TPM4-216ENST00000592822 USP47Q96K76 1375 aa14.07□□□□□ -0.16
TPM4-216ENST00000592822 TULP4Q9NRJ4 1543 aa14.06□□□□□ -0.16
TPM4-216ENST00000592822 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
TPM4-216ENST00000592822 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
TPM4-216ENST00000592822 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
TPM4-216ENST00000592822 PRR36Q9H6K5 1346 aa14.05□□□□□ -0.16
TPM4-216ENST00000592822 SBNO2Q9Y2G9 1366 aa14.05□□□□□ -0.16
TPM4-216ENST00000592822 ANKARQ7Z5J8 1434 aa14.05□□□□□ -0.16
TPM4-216ENST00000592822 HSPA1LP34931 641 aa14.04□□□□□ -0.16
TPM4-216ENST00000592822 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
TPM4-216ENST00000592822 TESK2Q96S53 571 aa14.03□□□□□ -0.16
TPM4-216ENST00000592822 NHSL1Q5SYE7 1610 aa14.03□□□□□ -0.16
TPM4-216ENST00000592822 AHDC1Q5TGY3 1603 aaPredicted RBP14.02□□□□□ -0.16
TPM4-216ENST00000592822 ATP7BP35670 1465 aa14.02□□□□□ -0.16
TPM4-216ENST00000592822 EVC2Q86UK5 1308 aa14.02□□□□□ -0.17
TPM4-216ENST00000592822 NUDT16Q96DE0 195 aaKnown RBP14.02□□□□□ -0.17
TPM4-216ENST00000592822 CABP2Q9NPB3 220 aa14.02□□□□□ -0.17
TPM4-216ENST00000592822 PHLPP1O60346 1717 aa14.01□□□□□ -0.17
TPM4-216ENST00000592822 DDX17Q92841 729 aaKnown RBP14.01□□□□□ -0.17
TPM4-216ENST00000592822 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
TPM4-216ENST00000592822 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
TPM4-216ENST00000592822 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
TPM4-216ENST00000592822 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
TPM4-216ENST00000592822 PHF8Q9UPP1 1060 aa14□□□□□ -0.17
TPM4-216ENST00000592822 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM4-216ENST00000592822 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
TPM4-216ENST00000592822 FOXO3O43524 673 aa13.98□□□□□ -0.17
TPM4-216ENST00000592822 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
TPM4-216ENST00000592822 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
TPM4-216ENST00000592822 PMFBP1Q8TBY8 1022 aa13.97□□□□□ -0.17
TPM4-216ENST00000592822 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
TPM4-216ENST00000592822 SOS2Q07890 1332 aaPredicted RBP13.96□□□□□ -0.17
TPM4-216ENST00000592822 NPHP3Q7Z494 1330 aa13.96□□□□□ -0.17
TPM4-216ENST00000592822 PXDNQ92626 1479 aa13.96□□□□□ -0.17
TPM4-216ENST00000592822 PPIP5K1Q6PFW1 1433 aa13.96□□□□□ -0.18
TPM4-216ENST00000592822 PLEKHG3A1L390 1219 aa13.95□□□□□ -0.18
TPM4-216ENST00000592822 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
TPM4-216ENST00000592822 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
TPM4-216ENST00000592822 TMF1P82094 1093 aa13.94□□□□□ -0.18
TPM4-216ENST00000592822 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
TPM4-216ENST00000592822 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
TPM4-216ENST00000592822 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
TPM4-216ENST00000592822 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
TPM4-216ENST00000592822 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
TPM4-216ENST00000592822 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
TPM4-216ENST00000592822 ACEP12821 1306 aa13.92□□□□□ -0.18
TPM4-216ENST00000592822 PSME1Q06323 249 aa13.92□□□□□ -0.18
TPM4-216ENST00000592822 TRPM3Q9HCF6 1732 aaPredicted RBP13.92□□□□□ -0.18
TPM4-216ENST00000592822 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
TPM4-216ENST00000592822 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
TPM4-216ENST00000592822 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
TPM4-216ENST00000592822 JCADQ9P266 1359 aa13.9□□□□□ -0.18
TPM4-216ENST00000592822 AKAP12Q02952 1782 aa13.9□□□□□ -0.18
TPM4-216ENST00000592822 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
TPM4-216ENST00000592822 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
TPM4-216ENST00000592822 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
TPM4-216ENST00000592822 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
TPM4-216ENST00000592822 CD163L1Q9NR16 1453 aa13.88□□□□□ -0.19
TPM4-216ENST00000592822 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
TPM4-216ENST00000592822 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
TPM4-216ENST00000592822 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
TPM4-216ENST00000592822 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
TPM4-216ENST00000592822 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
TPM4-216ENST00000592822 MYOM1P52179 1685 aa13.87□□□□□ -0.19
TPM4-216ENST00000592822 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
TPM4-216ENST00000592822 COL22A1Q8NFW1 1626 aaPredicted RBP13.86□□□□□ -0.19
TPM4-216ENST00000592822 USP6P35125 1406 aa13.86□□□□□ -0.19
TPM4-216ENST00000592822 MON2Q7Z3U7 1717 aa13.86□□□□□ -0.19
TPM4-216ENST00000592822 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
TPM4-216ENST00000592822 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
TPM4-216ENST00000592822 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
TPM4-216ENST00000592822 NRKQ7Z2Y5 1582 aa13.84□□□□□ -0.19
TPM4-216ENST00000592822 PAK3O75914 559 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms