RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, humanhuman

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-223ENST00000592594 COL16A1Q07092 1604 aaPredicted RBP23.67■■□□□ 1.38
TMC6-223ENST00000592594 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
TMC6-223ENST00000592594 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
TMC6-223ENST00000592594 SLAIN2Q9P270 581 aa23.66■■□□□ 1.38
TMC6-223ENST00000592594 AHDC1Q5TGY3 1603 aaPredicted RBP23.66■■□□□ 1.38
TMC6-223ENST00000592594 ADGRB2O60241 1585 aa23.65■■□□□ 1.38
TMC6-223ENST00000592594 CADPS2Q86UW7 1296 aa23.64■■□□□ 1.37
TMC6-223ENST00000592594 ATF3P18847 181 aa23.62■■□□□ 1.37
TMC6-223ENST00000592594 USP32Q8NFA0 1604 aa23.62■■□□□ 1.37
TMC6-223ENST00000592594 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
TMC6-223ENST00000592594 C1orf167Q5SNV9 1468 aa23.61■■□□□ 1.37
TMC6-223ENST00000592594 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
TMC6-223ENST00000592594 BRINP3Q76B58 766 aa23.58■■□□□ 1.37
TMC6-223ENST00000592594 SOCS7O14512 581 aa23.57■■□□□ 1.36
TMC6-223ENST00000592594 PRAM1Q96QH2 718 aa23.57■■□□□ 1.36
TMC6-223ENST00000592594 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
TMC6-223ENST00000592594 TRAK1Q9UPV9 953 aa23.56■■□□□ 1.36
TMC6-223ENST00000592594 QRICH2Q9H0J4 1663 aa23.55■■□□□ 1.36
TMC6-223ENST00000592594 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
TMC6-223ENST00000592594 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
TMC6-223ENST00000592594 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
TMC6-223ENST00000592594 SAFB2Q14151 953 aaKnown RBP eCLIP23.52■■□□□ 1.36
TMC6-223ENST00000592594 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
TMC6-223ENST00000592594 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
TMC6-223ENST00000592594 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
TMC6-223ENST00000592594 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
TMC6-223ENST00000592594 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
TMC6-223ENST00000592594 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
TMC6-223ENST00000592594 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
TMC6-223ENST00000592594 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
TMC6-223ENST00000592594 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
TMC6-223ENST00000592594 MINK1Q8N4C8 1332 aaPredicted RBP23.45■■□□□ 1.34
TMC6-223ENST00000592594 POGKQ9P215 609 aa23.45■■□□□ 1.34
TMC6-223ENST00000592594 PXDNQ92626 1479 aa23.44■■□□□ 1.34
TMC6-223ENST00000592594 NUTM2FA1L443 756 aa23.44■■□□□ 1.34
TMC6-223ENST00000592594 HIRIP3Q9BW71 556 aaPredicted RBP23.43■■□□□ 1.34
TMC6-223ENST00000592594 ROCK2O75116 1388 aaKnown RBP23.42■■□□□ 1.34
TMC6-223ENST00000592594 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
TMC6-223ENST00000592594 ATP7BP35670 1465 aa23.42■■□□□ 1.34
TMC6-223ENST00000592594 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
TMC6-223ENST00000592594 PRR36Q9H6K5 1346 aa23.41■■□□□ 1.34
TMC6-223ENST00000592594 LRP6O75581 1613 aa23.4■■□□□ 1.34
TMC6-223ENST00000592594 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.34
TMC6-223ENST00000592594 COL22A1Q8NFW1 1626 aaPredicted RBP23.39■■□□□ 1.33
TMC6-223ENST00000592594 JCADQ9P266 1359 aa23.39■■□□□ 1.33
TMC6-223ENST00000592594 SOS2Q07890 1332 aaPredicted RBP23.37■■□□□ 1.33
TMC6-223ENST00000592594 ESCO1Q5FWF5 840 aa23.37■■□□□ 1.33
TMC6-223ENST00000592594 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
TMC6-223ENST00000592594 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
TMC6-223ENST00000592594 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
TMC6-223ENST00000592594 ABCA3Q99758 1704 aa23.33■■□□□ 1.32
TMC6-223ENST00000592594 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
TMC6-223ENST00000592594 FOXO3O43524 673 aa23.31■■□□□ 1.32
TMC6-223ENST00000592594 MARF1Q9Y4F3 1742 aaKnown RBP23.3■■□□□ 1.32
TMC6-223ENST00000592594 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
TMC6-223ENST00000592594 XPCQ01831 940 aaPredicted RBP23.3■■□□□ 1.32
TMC6-223ENST00000592594 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
TMC6-223ENST00000592594 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
TMC6-223ENST00000592594 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
TMC6-223ENST00000592594 CRYBG1Q9Y4K1 1723 aa23.29■■□□□ 1.32
TMC6-223ENST00000592594 CDK19Q9BWU1 502 aa23.28■■□□□ 1.32
TMC6-223ENST00000592594 LRRC59Q96AG4 307 aaKnown RBP23.26■■□□□ 1.31
TMC6-223ENST00000592594 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
TMC6-223ENST00000592594 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
TMC6-223ENST00000592594 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
TMC6-223ENST00000592594 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
TMC6-223ENST00000592594 AKAP12Q02952 1782 aa23.24■■□□□ 1.31
TMC6-223ENST00000592594 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
TMC6-223ENST00000592594 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
TMC6-223ENST00000592594 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
TMC6-223ENST00000592594 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
TMC6-223ENST00000592594 POLR3AO14802 1390 aaPredicted RBP23.2■■□□□ 1.3
TMC6-223ENST00000592594 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
TMC6-223ENST00000592594 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
TMC6-223ENST00000592594 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
TMC6-223ENST00000592594 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
TMC6-223ENST00000592594 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
TMC6-223ENST00000592594 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
TMC6-223ENST00000592594 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
TMC6-223ENST00000592594 USP47Q96K76 1375 aa23.15■■□□□ 1.3
TMC6-223ENST00000592594 PHRF1Q9P1Y6 1649 aaKnown RBP23.15■■□□□ 1.3
TMC6-223ENST00000592594 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
TMC6-223ENST00000592594 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
TMC6-223ENST00000592594 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
TMC6-223ENST00000592594 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
TMC6-223ENST00000592594 TESK2Q96S53 571 aa23.15■■□□□ 1.3
TMC6-223ENST00000592594 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
TMC6-223ENST00000592594 EVC2Q86UK5 1308 aa23.14■■□□□ 1.3
TMC6-223ENST00000592594 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
TMC6-223ENST00000592594 ACEP12821 1306 aa23.12■■□□□ 1.29
TMC6-223ENST00000592594 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
TMC6-223ENST00000592594 PSME1Q06323 249 aa23.11■■□□□ 1.29
TMC6-223ENST00000592594 PIK3C2AO00443 1686 aa23.11■■□□□ 1.29
TMC6-223ENST00000592594 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
TMC6-223ENST00000592594 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
TMC6-223ENST00000592594 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
TMC6-223ENST00000592594 CD163L1Q9NR16 1453 aa23.1■■□□□ 1.29
TMC6-223ENST00000592594 MYOM1P52179 1685 aa23.09■■□□□ 1.29
TMC6-223ENST00000592594 SSH2Q76I76 1423 aa23.08■■□□□ 1.29
TMC6-223ENST00000592594 ARHGEF10O15013 1369 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms