RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 RALGAPBQ86X10 1494 aa13.92□□□□□ -0.18
TPM4-215ENST00000592138 STK26Q9P289 416 aa13.91□□□□□ -0.18
TPM4-215ENST00000592138 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
TPM4-215ENST00000592138 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
TPM4-215ENST00000592138 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
TPM4-215ENST00000592138 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
TPM4-215ENST00000592138 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
TPM4-215ENST00000592138 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
TPM4-215ENST00000592138 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
TPM4-215ENST00000592138 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
TPM4-215ENST00000592138 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
TPM4-215ENST00000592138 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.88□□□□□ -0.19
TPM4-215ENST00000592138 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
TPM4-215ENST00000592138 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
TPM4-215ENST00000592138 ATF3P18847 181 aa13.87□□□□□ -0.19
TPM4-215ENST00000592138 WAPLQ7Z5K2 1190 aa13.87□□□□□ -0.19
TPM4-215ENST00000592138 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
TPM4-215ENST00000592138 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
TPM4-215ENST00000592138 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
TPM4-215ENST00000592138 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
TPM4-215ENST00000592138 EIF3AQ14152 1382 aaKnown RBP13.85□□□□□ -0.19
TPM4-215ENST00000592138 POGKQ9P215 609 aa13.85□□□□□ -0.19
TPM4-215ENST00000592138 MST1RQ04912 1400 aa13.84□□□□□ -0.19
TPM4-215ENST00000592138 SRCAPQ6ZRS2 3230 aa13.84□□□□□ -0.19
TPM4-215ENST00000592138 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
TPM4-215ENST00000592138 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
TPM4-215ENST00000592138 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
TPM4-215ENST00000592138 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
TPM4-215ENST00000592138 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
TPM4-215ENST00000592138 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
TPM4-215ENST00000592138 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM4-215ENST00000592138 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
TPM4-215ENST00000592138 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
TPM4-215ENST00000592138 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
TPM4-215ENST00000592138 BRINP3Q76B58 766 aa13.77□□□□□ -0.21
TPM4-215ENST00000592138 MINK1Q8N4C8 1332 aaPredicted RBP13.77□□□□□ -0.21
TPM4-215ENST00000592138 TULP4Q9NRJ4 1543 aa13.77□□□□□ -0.21
TPM4-215ENST00000592138 QRICH2Q9H0J4 1663 aa13.76□□□□□ -0.21
TPM4-215ENST00000592138 AHDC1Q5TGY3 1603 aaPredicted RBP13.76□□□□□ -0.21
TPM4-215ENST00000592138 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
TPM4-215ENST00000592138 USP47Q96K76 1375 aa13.74□□□□□ -0.21
TPM4-215ENST00000592138 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
TPM4-215ENST00000592138 ATP7BP35670 1465 aa13.74□□□□□ -0.21
TPM4-215ENST00000592138 EVC2Q86UK5 1308 aa13.73□□□□□ -0.21
TPM4-215ENST00000592138 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
TPM4-215ENST00000592138 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
TPM4-215ENST00000592138 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
TPM4-215ENST00000592138 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
TPM4-215ENST00000592138 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
TPM4-215ENST00000592138 ESCO1Q5FWF5 840 aa13.71□□□□□ -0.21
TPM4-215ENST00000592138 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
TPM4-215ENST00000592138 TESK2Q96S53 571 aa13.71□□□□□ -0.21
TPM4-215ENST00000592138 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
TPM4-215ENST00000592138 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
TPM4-215ENST00000592138 PRR36Q9H6K5 1346 aa13.7□□□□□ -0.22
TPM4-215ENST00000592138 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
TPM4-215ENST00000592138 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
TPM4-215ENST00000592138 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
TPM4-215ENST00000592138 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
TPM4-215ENST00000592138 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
TPM4-215ENST00000592138 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
TPM4-215ENST00000592138 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
TPM4-215ENST00000592138 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
TPM4-215ENST00000592138 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
TPM4-215ENST00000592138 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
TPM4-215ENST00000592138 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
TPM4-215ENST00000592138 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
TPM4-215ENST00000592138 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
TPM4-215ENST00000592138 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPM4-215ENST00000592138 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
TPM4-215ENST00000592138 PXDNQ92626 1479 aa13.67□□□□□ -0.22
TPM4-215ENST00000592138 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
TPM4-215ENST00000592138 FOXO3O43524 673 aa13.65□□□□□ -0.22
TPM4-215ENST00000592138 TMF1P82094 1093 aa13.65□□□□□ -0.22
TPM4-215ENST00000592138 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
TPM4-215ENST00000592138 JCADQ9P266 1359 aa13.65□□□□□ -0.22
TPM4-215ENST00000592138 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
TPM4-215ENST00000592138 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
TPM4-215ENST00000592138 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
TPM4-215ENST00000592138 SBNO1A3KN83 1393 aa13.63□□□□□ -0.23
TPM4-215ENST00000592138 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
TPM4-215ENST00000592138 PSME1Q06323 249 aa13.63□□□□□ -0.23
TPM4-215ENST00000592138 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
TPM4-215ENST00000592138 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
TPM4-215ENST00000592138 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
TPM4-215ENST00000592138 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
TPM4-215ENST00000592138 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
TPM4-215ENST00000592138 SHPRHQ149N8 1683 aa13.61□□□□□ -0.23
TPM4-215ENST00000592138 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
TPM4-215ENST00000592138 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
TPM4-215ENST00000592138 ACEP12821 1306 aa13.61□□□□□ -0.23
TPM4-215ENST00000592138 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
TPM4-215ENST00000592138 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
TPM4-215ENST00000592138 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
TPM4-215ENST00000592138 CABP1Q9NZU7 370 aa13.6□□□□□ -0.23
TPM4-215ENST00000592138 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
TPM4-215ENST00000592138 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
TPM4-215ENST00000592138 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
TPM4-215ENST00000592138 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
TPM4-215ENST00000592138 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms