RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
NPC1-213ENST00000591955 WDR62O43379 1518 aa8.83□□□□□ -1
NPC1-213ENST00000591955 CYP4X1Q8N118 509 aa8.82□□□□□ -1
NPC1-213ENST00000591955 CFAP44Q96MT7 982 aa8.82□□□□□ -1
NPC1-213ENST00000591955 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
NPC1-213ENST00000591955 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
NPC1-213ENST00000591955 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
NPC1-213ENST00000591955 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
NPC1-213ENST00000591955 CD2BP2O95400 341 aaKnown RBP8.81□□□□□ -1
NPC1-213ENST00000591955 NEUROD1Q13562 356 aa8.81□□□□□ -1
NPC1-213ENST00000591955 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
NPC1-213ENST00000591955 THAP11Q96EK4 314 aa8.8□□□□□ -1
NPC1-213ENST00000591955 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
NPC1-213ENST00000591955 NUTM2FA1L443 756 aa8.79□□□□□ -1
NPC1-213ENST00000591955 FCHSD2O94868 740 aa8.78□□□□□ -1
NPC1-213ENST00000591955 OATP04181 439 aa8.78□□□□□ -1
NPC1-213ENST00000591955 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
NPC1-213ENST00000591955 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
NPC1-213ENST00000591955 PEG3Q9GZU2 1588 aa8.78□□□□□ -1
NPC1-213ENST00000591955 MORN1Q5T089 497 aa8.77□□□□□ -1.01
NPC1-213ENST00000591955 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
NPC1-213ENST00000591955 FAM160A2Q8N612 972 aaPredicted RBP8.77□□□□□ -1.01
NPC1-213ENST00000591955 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
NPC1-213ENST00000591955 KCNV2Q8TDN2 545 aa8.76□□□□□ -1.01
NPC1-213ENST00000591955 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
NPC1-213ENST00000591955 METTL3Q86U44 580 aaKnown RBP8.75□□□□□ -1.01
NPC1-213ENST00000591955 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
NPC1-213ENST00000591955 TTC24A2A3L6 582 aaPredicted RBP8.73□□□□□ -1.01
NPC1-213ENST00000591955 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
NPC1-213ENST00000591955 SMPD1P17405 629 aa8.73□□□□□ -1.01
NPC1-213ENST00000591955 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
NPC1-213ENST00000591955 ARHGEF11O15085 1522 aa8.72□□□□□ -1.01
NPC1-213ENST00000591955 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
NPC1-213ENST00000591955 SNRPBP14678 240 aaKnown RBP8.72□□□□□ -1.01
NPC1-213ENST00000591955 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
NPC1-213ENST00000591955 FUT2Q10981 343 aa8.72□□□□□ -1.01
NPC1-213ENST00000591955 PRDM9Q9NQV7 894 aa8.72□□□□□ -1.01
NPC1-213ENST00000591955 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
NPC1-213ENST00000591955 WNT7AO00755 349 aa8.71□□□□□ -1.02
NPC1-213ENST00000591955 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
NPC1-213ENST00000591955 ANP32EQ9BTT0 268 aa8.71□□□□□ -1.02
NPC1-213ENST00000591955 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
NPC1-213ENST00000591955 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
NPC1-213ENST00000591955 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
NPC1-213ENST00000591955 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
NPC1-213ENST00000591955 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
NPC1-213ENST00000591955 ZBTB24O43167 697 aaPredicted RBP8.69□□□□□ -1.02
NPC1-213ENST00000591955 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
NPC1-213ENST00000591955 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
NPC1-213ENST00000591955 BCL11AQ9H165 835 aa8.69□□□□□ -1.02
NPC1-213ENST00000591955 HIC1Q14526 733 aa8.68□□□□□ -1.02
NPC1-213ENST00000591955 SENP2Q9HC62 589 aa8.68□□□□□ -1.02
NPC1-213ENST00000591955 CADPSQ9ULU8 1353 aa8.68□□□□□ -1.02
NPC1-213ENST00000591955 GCGRP47871 477 aa8.67□□□□□ -1.02
NPC1-213ENST00000591955 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
NPC1-213ENST00000591955 J3QL48 77 aa8.66□□□□□ -1.02
NPC1-213ENST00000591955 TRIM32Q13049 653 aa8.66□□□□□ -1.02
NPC1-213ENST00000591955 MRGPRX2Q96LB1 330 aa8.66□□□□□ -1.02
NPC1-213ENST00000591955 WIZO95785 1651 aa8.65□□□□□ -1.02
NPC1-213ENST00000591955 FANCD2Q9BXW9 1451 aa8.65□□□□□ -1.02
NPC1-213ENST00000591955 DDX11L8A8MPP1 907 aa8.65□□□□□ -1.02
NPC1-213ENST00000591955 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
NPC1-213ENST00000591955 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
NPC1-213ENST00000591955 HPS1Q92902 700 aa8.63□□□□□ -1.03
NPC1-213ENST00000591955 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
NPC1-213ENST00000591955 ZNF608Q9ULD9 1512 aaPredicted RBP8.63□□□□□ -1.03
NPC1-213ENST00000591955 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
NPC1-213ENST00000591955 CHD1O14646 1710 aa8.63□□□□□ -1.03
NPC1-213ENST00000591955 SEMA3EO15041 775 aa8.62□□□□□ -1.03
NPC1-213ENST00000591955 FECHP22830 423 aa8.62□□□□□ -1.03
NPC1-213ENST00000591955 MMP16P51512 607 aa8.62□□□□□ -1.03
NPC1-213ENST00000591955 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
NPC1-213ENST00000591955 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
NPC1-213ENST00000591955 GNPATO15228 680 aa8.6□□□□□ -1.03
NPC1-213ENST00000591955 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
NPC1-213ENST00000591955 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
NPC1-213ENST00000591955 TSHZ2Q9NRE2 1034 aa8.6□□□□□ -1.03
NPC1-213ENST00000591955 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
NPC1-213ENST00000591955 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
NPC1-213ENST00000591955 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
NPC1-213ENST00000591955 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
NPC1-213ENST00000591955 FAM181BA6NEQ2 426 aa8.58□□□□□ -1.04
NPC1-213ENST00000591955 GPR37O15354 613 aa8.58□□□□□ -1.04
NPC1-213ENST00000591955 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
NPC1-213ENST00000591955 CYB5RLQ6IPT4 315 aa8.58□□□□□ -1.04
NPC1-213ENST00000591955 DXOO77932 396 aaKnown RBP8.57□□□□□ -1.04
NPC1-213ENST00000591955 Q3C1V9 767 aa8.57□□□□□ -1.04
NPC1-213ENST00000591955 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
NPC1-213ENST00000591955 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
NPC1-213ENST00000591955 WRNQ14191 1432 aaPredicted RBP eCLIP8.56□□□□□ -1.04
NPC1-213ENST00000591955 RBM26Q5T8P6 1007 aaKnown RBP8.56□□□□□ -1.04
NPC1-213ENST00000591955 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
NPC1-213ENST00000591955 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
NPC1-213ENST00000591955 PRDM2Q13029 1718 aa8.55□□□□□ -1.04
NPC1-213ENST00000591955 GMPRP36959 345 aa8.55□□□□□ -1.04
NPC1-213ENST00000591955 SKOR1P84550 965 aa8.55□□□□□ -1.04
NPC1-213ENST00000591955 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
NPC1-213ENST00000591955 CFTRP13569 1480 aa8.54□□□□□ -1.04
NPC1-213ENST00000591955 WNT7BP56706 349 aa8.54□□□□□ -1.04
NPC1-213ENST00000591955 NPAS3Q8IXF0 933 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms