RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 NUDCQ9Y266 331 aa15.16■□□□□ 0.02
TPM4-213ENST00000591226 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
TPM4-213ENST00000591226 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
TPM4-213ENST00000591226 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
TPM4-213ENST00000591226 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
TPM4-213ENST00000591226 PTPRMP28827 1452 aa15.15■□□□□ 0.02
TPM4-213ENST00000591226 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
TPM4-213ENST00000591226 YTHDC2Q9H6S0 1430 aaKnown RBP15.15■□□□□ 0.02
TPM4-213ENST00000591226 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
TPM4-213ENST00000591226 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
TPM4-213ENST00000591226 INSRP06213 1382 aa15.14■□□□□ 0.01
TPM4-213ENST00000591226 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
TPM4-213ENST00000591226 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
TPM4-213ENST00000591226 PRAM1Q96QH2 718 aa15.11■□□□□ 0.01
TPM4-213ENST00000591226 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
TPM4-213ENST00000591226 ADAMTS8Q9UP79 889 aa15.1■□□□□ 0.01
TPM4-213ENST00000591226 TNRQ92752 1358 aa15.1■□□□□ 0.01
TPM4-213ENST00000591226 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
TPM4-213ENST00000591226 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
TPM4-213ENST00000591226 POGKQ9P215 609 aa15.09■□□□□ 0.01
TPM4-213ENST00000591226 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
TPM4-213ENST00000591226 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
TPM4-213ENST00000591226 NRXN3Q9Y4C0 1643 aa15.08■□□□□ 0
TPM4-213ENST00000591226 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
TPM4-213ENST00000591226 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
TPM4-213ENST00000591226 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
TPM4-213ENST00000591226 MORC1Q86VD1 984 aa15.05■□□□□ 0
TPM4-213ENST00000591226 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.05■□□□□ 0
TPM4-213ENST00000591226 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
TPM4-213ENST00000591226 PDE3BQ13370 1112 aa15.05■□□□□ -0
TPM4-213ENST00000591226 DLC1Q96QB1 1528 aa15.05■□□□□ -0
TPM4-213ENST00000591226 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
TPM4-213ENST00000591226 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
TPM4-213ENST00000591226 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
TPM4-213ENST00000591226 HOMEZQ8IX15 550 aa15.04■□□□□ -0
TPM4-213ENST00000591226 TNNT2P45379 298 aaPredicted RBP15.03■□□□□ -0
TPM4-213ENST00000591226 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
TPM4-213ENST00000591226 A0A1W2PP64 1363 aa15.03■□□□□ -0
TPM4-213ENST00000591226 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
TPM4-213ENST00000591226 NINLQ9Y2I6 1382 aa15.03■□□□□ -0
TPM4-213ENST00000591226 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
TPM4-213ENST00000591226 WAPLQ7Z5K2 1190 aa15.02■□□□□ -0
TPM4-213ENST00000591226 CEBPAP49715 358 aaPredicted RBP15.02□□□□□ -0.01
TPM4-213ENST00000591226 METP08581 1390 aa15.02□□□□□ -0.01
TPM4-213ENST00000591226 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
TPM4-213ENST00000591226 ABCC11Q96J66 1382 aa15.01□□□□□ -0.01
TPM4-213ENST00000591226 TMEM2Q9UHN6 1383 aa15.01□□□□□ -0.01
TPM4-213ENST00000591226 POLR3AO14802 1390 aaPredicted RBP15.01□□□□□ -0.01
TPM4-213ENST00000591226 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
TPM4-213ENST00000591226 NSD2O96028 1365 aa15□□□□□ -0.01
TPM4-213ENST00000591226 CCDC146Q8IYE0 955 aa15□□□□□ -0.01
TPM4-213ENST00000591226 CD163L1Q9NR16 1453 aa15□□□□□ -0.01
TPM4-213ENST00000591226 C3P01024 1663 aa15□□□□□ -0.01
TPM4-213ENST00000591226 HDGFP51858 240 aaKnown RBP15□□□□□ -0.01
TPM4-213ENST00000591226 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
TPM4-213ENST00000591226 FER1L4A9Z1Z3 1794 aa14.99□□□□□ -0.01
TPM4-213ENST00000591226 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
TPM4-213ENST00000591226 SHPRHQ149N8 1683 aa14.98□□□□□ -0.01
TPM4-213ENST00000591226 RCAN3Q9UKA8 241 aa14.98□□□□□ -0.01
TPM4-213ENST00000591226 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
TPM4-213ENST00000591226 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
TPM4-213ENST00000591226 TXNDC2Q86VQ3 553 aa14.96□□□□□ -0.01
TPM4-213ENST00000591226 MTHFSP49914 203 aa14.96□□□□□ -0.02
TPM4-213ENST00000591226 CABP1Q9NZU7 370 aa14.96□□□□□ -0.02
TPM4-213ENST00000591226 ZNF521Q96K83 1311 aa14.96□□□□□ -0.02
TPM4-213ENST00000591226 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 TECPR2O15040 1411 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 ADAMTS13Q76LX8 1427 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 APAF1O14727 1248 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 LTKP29376 864 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
TPM4-213ENST00000591226 B4GALNT3Q6L9W6 998 aa14.95□□□□□ -0.02
TPM4-213ENST00000591226 CPS1P31327 1500 aa14.94□□□□□ -0.02
TPM4-213ENST00000591226 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
TPM4-213ENST00000591226 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
TPM4-213ENST00000591226 FAM135BQ49AJ0 1406 aa14.93□□□□□ -0.02
TPM4-213ENST00000591226 ANKRD26Q9UPS8 1709 aa14.93□□□□□ -0.02
TPM4-213ENST00000591226 PLEKHG1Q9ULL1 1385 aa14.93□□□□□ -0.02
TPM4-213ENST00000591226 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
TPM4-213ENST00000591226 FYB1O15117 783 aa14.92□□□□□ -0.02
TPM4-213ENST00000591226 ATP7BP35670 1465 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 CFAP53Q96M91 514 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 MED14O60244 1454 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 KIF20BQ96Q89 1820 aa14.91□□□□□ -0.02
TPM4-213ENST00000591226 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
TPM4-213ENST00000591226 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
TPM4-213ENST00000591226 SLIT1O75093 1534 aa14.9□□□□□ -0.02
TPM4-213ENST00000591226 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
TPM4-213ENST00000591226 PPIP5K1Q6PFW1 1433 aa14.89□□□□□ -0.03
TPM4-213ENST00000591226 EID1Q9Y6B2 187 aa14.89□□□□□ -0.03
TPM4-213ENST00000591226 SLFN5Q08AF3 891 aa14.88□□□□□ -0.03
TPM4-213ENST00000591226 SLC26A8Q96RN1 970 aa14.88□□□□□ -0.03
TPM4-213ENST00000591226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.87□□□□□ -0.03
TPM4-213ENST00000591226 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
TPM4-213ENST00000591226 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
TPM4-213ENST00000591226 NUDT16Q96DE0 195 aaKnown RBP14.87□□□□□ -0.03
TPM4-213ENST00000591226 NCKAP5LQ9HCH0 1330 aa14.86□□□□□ -0.03
TPM4-213ENST00000591226 PTPRUQ92729 1446 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms