RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
PTPN2-210ENST00000591115 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
PTPN2-210ENST00000591115 CPS1P31327 1500 aa13.62□□□□□ -0.23
PTPN2-210ENST00000591115 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
PTPN2-210ENST00000591115 PTPRUQ92729 1446 aa13.61□□□□□ -0.23
PTPN2-210ENST00000591115 NWD1Q149M9 1564 aa13.61□□□□□ -0.23
PTPN2-210ENST00000591115 SBNO2Q9Y2G9 1366 aa13.59□□□□□ -0.23
PTPN2-210ENST00000591115 RALBP1Q15311 655 aa13.59□□□□□ -0.23
PTPN2-210ENST00000591115 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
PTPN2-210ENST00000591115 MRS2Q9HD23 443 aa13.58□□□□□ -0.24
PTPN2-210ENST00000591115 STK26Q9P289 416 aa13.58□□□□□ -0.24
PTPN2-210ENST00000591115 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
PTPN2-210ENST00000591115 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
PTPN2-210ENST00000591115 TECPR2O15040 1411 aa13.58□□□□□ -0.24
PTPN2-210ENST00000591115 PER1O15534 1290 aaPredicted RBP13.57□□□□□ -0.24
PTPN2-210ENST00000591115 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
PTPN2-210ENST00000591115 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
PTPN2-210ENST00000591115 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
PTPN2-210ENST00000591115 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
PTPN2-210ENST00000591115 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
PTPN2-210ENST00000591115 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
PTPN2-210ENST00000591115 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
PTPN2-210ENST00000591115 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
PTPN2-210ENST00000591115 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
PTPN2-210ENST00000591115 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
PTPN2-210ENST00000591115 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
PTPN2-210ENST00000591115 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
PTPN2-210ENST00000591115 PARD3Q8TEW0 1356 aa13.53□□□□□ -0.24
PTPN2-210ENST00000591115 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
PTPN2-210ENST00000591115 KCNA6P17658 529 aa13.53□□□□□ -0.24
PTPN2-210ENST00000591115 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
PTPN2-210ENST00000591115 PANK3Q9H999 370 aa13.52□□□□□ -0.25
PTPN2-210ENST00000591115 CENPJQ9HC77 1338 aaPredicted RBP13.51□□□□□ -0.25
PTPN2-210ENST00000591115 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
PTPN2-210ENST00000591115 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN2-210ENST00000591115 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN2-210ENST00000591115 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
PTPN2-210ENST00000591115 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
PTPN2-210ENST00000591115 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
PTPN2-210ENST00000591115 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
PTPN2-210ENST00000591115 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
PTPN2-210ENST00000591115 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
PTPN2-210ENST00000591115 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
PTPN2-210ENST00000591115 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
PTPN2-210ENST00000591115 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
PTPN2-210ENST00000591115 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
PTPN2-210ENST00000591115 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
PTPN2-210ENST00000591115 MYOM1P52179 1685 aa13.47□□□□□ -0.25
PTPN2-210ENST00000591115 PNISRQ8TF01 805 aaKnown RBP13.47□□□□□ -0.25
PTPN2-210ENST00000591115 POGKQ9P215 609 aa13.47□□□□□ -0.25
PTPN2-210ENST00000591115 ZBED9Q6R2W3 1325 aa13.47□□□□□ -0.25
PTPN2-210ENST00000591115 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
PTPN2-210ENST00000591115 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
PTPN2-210ENST00000591115 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
PTPN2-210ENST00000591115 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.26
PTPN2-210ENST00000591115 LRRC7Q96NW7 1537 aa13.45□□□□□ -0.26
PTPN2-210ENST00000591115 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
PTPN2-210ENST00000591115 INSRP06213 1382 aa13.45□□□□□ -0.26
PTPN2-210ENST00000591115 ADGRL3Q9HAR2 1447 aa13.44□□□□□ -0.26
PTPN2-210ENST00000591115 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
PTPN2-210ENST00000591115 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
PTPN2-210ENST00000591115 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
PTPN2-210ENST00000591115 SIRT1Q96EB6 747 aa13.43□□□□□ -0.26
PTPN2-210ENST00000591115 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
PTPN2-210ENST00000591115 TOPAZ1Q8N9V7 1692 aa13.43□□□□□ -0.26
PTPN2-210ENST00000591115 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
PTPN2-210ENST00000591115 PROSER2Q86WR7 435 aaPredicted RBP13.42□□□□□ -0.26
PTPN2-210ENST00000591115 CC2D1BQ5T0F9 858 aaKnown RBP13.41□□□□□ -0.26
PTPN2-210ENST00000591115 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
PTPN2-210ENST00000591115 ITSN1Q15811 1721 aa13.41□□□□□ -0.26
PTPN2-210ENST00000591115 ATP7BP35670 1465 aa13.4□□□□□ -0.27
PTPN2-210ENST00000591115 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
PTPN2-210ENST00000591115 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
PTPN2-210ENST00000591115 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
PTPN2-210ENST00000591115 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
PTPN2-210ENST00000591115 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
PTPN2-210ENST00000591115 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
PTPN2-210ENST00000591115 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
PTPN2-210ENST00000591115 NEFLP07196 543 aa13.36□□□□□ -0.27
PTPN2-210ENST00000591115 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
PTPN2-210ENST00000591115 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
PTPN2-210ENST00000591115 DCCP43146 1447 aa13.36□□□□□ -0.27
PTPN2-210ENST00000591115 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
PTPN2-210ENST00000591115 NUTM2FA1L443 756 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 MSH6P52701 1360 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 PRR36Q9H6K5 1346 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
PTPN2-210ENST00000591115 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
PTPN2-210ENST00000591115 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
PTPN2-210ENST00000591115 MST1RQ04912 1400 aa13.33□□□□□ -0.28
PTPN2-210ENST00000591115 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
PTPN2-210ENST00000591115 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
PTPN2-210ENST00000591115 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
PTPN2-210ENST00000591115 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
PTPN2-210ENST00000591115 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
PTPN2-210ENST00000591115 C19orf44Q9H6X5 657 aa13.32□□□□□ -0.28
PTPN2-210ENST00000591115 NSD2O96028 1365 aa13.32□□□□□ -0.28
PTPN2-210ENST00000591115 MON2Q7Z3U7 1717 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms