RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	ZNF772	Q68DY9	489 aa	Predicted RBP	19.93	■□□□□ 0.78
NPC1-212	ENST00000591107	C8orf37	Q96NL8	207 aa		19.91	■□□□□ 0.78
NPC1-212	ENST00000591107	ORAI2	Q96SN7	254 aa		19.91	■□□□□ 0.78
NPC1-212	ENST00000591107	IFT172	Q9UG01	1749 aa		19.9	■□□□□ 0.78
NPC1-212	ENST00000591107	LAMC1	P11047	1609 aa		19.9	■□□□□ 0.78
NPC1-212	ENST00000591107	RGS12	O14924	1447 aa		19.88	■□□□□ 0.77
NPC1-212	ENST00000591107	PRAG1	Q86YV5	1406 aa		19.88	■□□□□ 0.77
NPC1-212	ENST00000591107	ADGRF5	Q8IZF2	1346 aa		19.88	■□□□□ 0.77
NPC1-212	ENST00000591107	VGF	O15240	615 aa	Predicted RBP	19.88	■□□□□ 0.77
NPC1-212	ENST00000591107	ADAMTS2	O95450	1211 aa		19.87	■□□□□ 0.77
NPC1-212	ENST00000591107	LRRC59	Q96AG4	307 aa	Known RBP	19.87	■□□□□ 0.77
NPC1-212	ENST00000591107	CDC42BPG	Q6DT37	1551 aa		19.87	■□□□□ 0.77
NPC1-212	ENST00000591107	RXRB	P28702	533 aa		19.86	■□□□□ 0.77
NPC1-212	ENST00000591107	UPF1	Q92900	1129 aa	Known RBP eCLIP	19.86	■□□□□ 0.77
NPC1-212	ENST00000591107	CCDC144A	A2RUR9	1427 aa		19.85	■□□□□ 0.77
NPC1-212	ENST00000591107	RGL3	Q3MIN7	710 aa		19.85	■□□□□ 0.77
NPC1-212	ENST00000591107	SPATA31E1	Q6ZUB1	1445 aa		19.85	■□□□□ 0.77
NPC1-212	ENST00000591107	RPGRIP1L	Q68CZ1	1315 aa		19.84	■□□□□ 0.77
NPC1-212	ENST00000591107	PLEKHH1	Q9ULM0	1364 aa		19.83	■□□□□ 0.77
NPC1-212	ENST00000591107	NUTM2F	A1L443	756 aa		19.83	■□□□□ 0.77
NPC1-212	ENST00000591107	STK26	Q9P289	416 aa		19.83	■□□□□ 0.77
NPC1-212	ENST00000591107	XPC	Q01831	940 aa	Predicted RBP	19.82	■□□□□ 0.76
NPC1-212	ENST00000591107	KNDC1	Q76NI1	1749 aa		19.82	■□□□□ 0.76
NPC1-212	ENST00000591107	SOS2	Q07890	1332 aa	Predicted RBP	19.81	■□□□□ 0.76
NPC1-212	ENST00000591107	CDK12	Q9NYV4	1490 aa	Predicted RBP	19.81	■□□□□ 0.76
NPC1-212	ENST00000591107	COL22A1	Q8NFW1	1626 aa	Predicted RBP	19.8	■□□□□ 0.76
NPC1-212	ENST00000591107	WAPL	Q7Z5K2	1190 aa		19.8	■□□□□ 0.76
NPC1-212	ENST00000591107	PXDN	Q92626	1479 aa		19.79	■□□□□ 0.76
NPC1-212	ENST00000591107	TMEM132E	Q6IEE7	984 aa		19.79	■□□□□ 0.76
NPC1-212	ENST00000591107	MPHOSPH9	Q99550	1183 aa		19.79	■□□□□ 0.76
NPC1-212	ENST00000591107	PIK3C2G	O75747	1445 aa		19.78	■□□□□ 0.76
NPC1-212	ENST00000591107	QTRT2	Q9H974	415 aa	Known RBP	19.78	■□□□□ 0.76
NPC1-212	ENST00000591107	FMN2	Q9NZ56	1722 aa		19.77	■□□□□ 0.76
NPC1-212	ENST00000591107	ESCO1	Q5FWF5	840 aa		19.77	■□□□□ 0.76
NPC1-212	ENST00000591107	NGLY1	Q96IV0	654 aa		19.77	■□□□□ 0.76
NPC1-212	ENST00000591107	TECPR2	O15040	1411 aa		19.76	■□□□□ 0.75
NPC1-212	ENST00000591107	MYOM2	P54296	1465 aa		19.76	■□□□□ 0.75
NPC1-212	ENST00000591107	LRPPRC	P42704	1394 aa	Known RBP	19.76	■□□□□ 0.75
NPC1-212	ENST00000591107	RBM6	P78332	1123 aa	Known RBP	19.74	■□□□□ 0.75
NPC1-212	ENST00000591107	MARF1	Q9Y4F3	1742 aa	Known RBP	19.73	■□□□□ 0.75
NPC1-212	ENST00000591107	ANKRD30B	Q9BXX2	1392 aa		19.73	■□□□□ 0.75
NPC1-212	ENST00000591107		U3KPZ7	1027 aa	Predicted RBP	19.73	■□□□□ 0.75
NPC1-212	ENST00000591107	YTHDC2	Q9H6S0	1430 aa	Known RBP	19.73	■□□□□ 0.75
NPC1-212	ENST00000591107	FOXO3	O43524	673 aa		19.72	■□□□□ 0.75
NPC1-212	ENST00000591107	USP21	Q9UK80	565 aa		19.72	■□□□□ 0.75
NPC1-212	ENST00000591107	RGPD8	O14715	1765 aa	Predicted RBP	19.72	■□□□□ 0.75
NPC1-212	ENST00000591107	NPHP3	Q7Z494	1330 aa		19.71	■□□□□ 0.75
NPC1-212	ENST00000591107	ATRN	O75882	1429 aa		19.69	■□□□□ 0.74
NPC1-212	ENST00000591107	KIF1A	Q12756	1690 aa		19.69	■□□□□ 0.74
NPC1-212	ENST00000591107	ABCC11	Q96J66	1382 aa		19.69	■□□□□ 0.74
NPC1-212	ENST00000591107	PLEKHG5	O94827	1062 aa		19.68	■□□□□ 0.74
NPC1-212	ENST00000591107	NRXN1	Q9ULB1	1477 aa		19.67	■□□□□ 0.74
NPC1-212	ENST00000591107	SAFB2	Q14151	953 aa	Known RBP eCLIP	19.67	■□□□□ 0.74
NPC1-212	ENST00000591107	BCL9L	Q86UU0	1499 aa		19.67	■□□□□ 0.74
NPC1-212	ENST00000591107	CFAP70	Q5T0N1	1121 aa		19.66	■□□□□ 0.74
NPC1-212	ENST00000591107	SAMD1	Q6SPF0	538 aa	Predicted RBP	19.66	■□□□□ 0.74
NPC1-212	ENST00000591107	TRPC5	Q9UL62	973 aa	Predicted RBP	19.65	■□□□□ 0.74
NPC1-212	ENST00000591107	RAB3GAP2	Q9H2M9	1393 aa		19.65	■□□□□ 0.74
NPC1-212	ENST00000591107	USP32	Q8NFA0	1604 aa		19.65	■□□□□ 0.74
NPC1-212	ENST00000591107	FNBP4	Q8N3X1	1017 aa	Predicted RBP	19.64	■□□□□ 0.73
NPC1-212	ENST00000591107	ABCA3	Q99758	1704 aa		19.64	■□□□□ 0.73
NPC1-212	ENST00000591107	GLI3	P10071	1580 aa		19.62	■□□□□ 0.73
NPC1-212	ENST00000591107	ATAD2	Q6PL18	1390 aa		19.62	■□□□□ 0.73
NPC1-212	ENST00000591107	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	19.62	■□□□□ 0.73
NPC1-212	ENST00000591107	C14orf93	Q9H972	538 aa	Known RBP	19.61	■□□□□ 0.73
NPC1-212	ENST00000591107	EP400	Q96L91	3159 aa		19.6	■□□□□ 0.73
NPC1-212	ENST00000591107	SPATA31A3	Q5VYP0	1347 aa		19.6	■□□□□ 0.73
NPC1-212	ENST00000591107	PLCH1	Q4KWH8	1693 aa		19.6	■□□□□ 0.73
NPC1-212	ENST00000591107	PRAM1	Q96QH2	718 aa		19.6	■□□□□ 0.73
NPC1-212	ENST00000591107	ADGRB1	O14514	1584 aa		19.6	■□□□□ 0.73
NPC1-212	ENST00000591107	TNS3	Q68CZ2	1445 aa		19.59	■□□□□ 0.73
NPC1-212	ENST00000591107	CABLES1	Q8TDN4	633 aa		19.59	■□□□□ 0.73
NPC1-212	ENST00000591107	KRT28	Q7Z3Y7	464 aa		19.58	■□□□□ 0.72
NPC1-212	ENST00000591107	RALGAPB	Q86X10	1494 aa		19.58	■□□□□ 0.72
NPC1-212	ENST00000591107	SLIT2	O94813	1529 aa		19.57	■□□□□ 0.72
NPC1-212	ENST00000591107	PHF8	Q9UPP1	1060 aa		19.57	■□□□□ 0.72
NPC1-212	ENST00000591107	ADGRB2	O60241	1585 aa		19.57	■□□□□ 0.72
NPC1-212	ENST00000591107	DHX57	Q6P158	1386 aa	Known RBP	19.57	■□□□□ 0.72
NPC1-212	ENST00000591107	DLC1	Q96QB1	1528 aa		19.56	■□□□□ 0.72
NPC1-212	ENST00000591107	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.56	■□□□□ 0.72
NPC1-212	ENST00000591107	BRWD3	Q6RI45	1802 aa		19.55	■□□□□ 0.72
NPC1-212	ENST00000591107	LMOD2	Q6P5Q4	547 aa		19.54	■□□□□ 0.72
NPC1-212	ENST00000591107	PMFBP1	Q8TBY8	1022 aa		19.54	■□□□□ 0.72
NPC1-212	ENST00000591107	GJD4	Q96KN9	370 aa	Predicted RBP	19.54	■□□□□ 0.72
NPC1-212	ENST00000591107	TRPM3	Q9HCF6	1732 aa	Predicted RBP	19.54	■□□□□ 0.72
NPC1-212	ENST00000591107	HAP1	P54257	671 aa	Predicted RBP	19.52	■□□□□ 0.72
NPC1-212	ENST00000591107	POGK	Q9P215	609 aa		19.52	■□□□□ 0.72
NPC1-212	ENST00000591107	TRAK1	Q9UPV9	953 aa		19.52	■□□□□ 0.72
NPC1-212	ENST00000591107	KDM2A	Q9Y2K7	1162 aa		19.52	■□□□□ 0.72
NPC1-212	ENST00000591107	MINK1	Q8N4C8	1332 aa	Predicted RBP	19.51	■□□□□ 0.71
NPC1-212	ENST00000591107	UNC5CL	Q8IV45	518 aa		19.51	■□□□□ 0.71
NPC1-212	ENST00000591107	ATF5	Q9Y2D1	282 aa	Predicted RBP	19.51	■□□□□ 0.71
NPC1-212	ENST00000591107	PRR36	Q9H6K5	1346 aa		19.51	■□□□□ 0.71
NPC1-212	ENST00000591107	SIRT1	Q96EB6	747 aa		19.5	■□□□□ 0.71
NPC1-212	ENST00000591107	NRAP	Q86VF7	1730 aa		19.5	■□□□□ 0.71
NPC1-212	ENST00000591107	ARHGEF28	Q8N1W1	1705 aa	Known RBP	19.5	■□□□□ 0.71
NPC1-212	ENST00000591107	ANKAR	Q7Z5J8	1434 aa		19.49	■□□□□ 0.71
NPC1-212	ENST00000591107	NWD2	Q9ULI1	1742 aa		19.48	■□□□□ 0.71
NPC1-212	ENST00000591107	SBNO1	A3KN83	1393 aa		19.48	■□□□□ 0.71
NPC1-212	ENST00000591107	TULP4	Q9NRJ4	1543 aa		19.48	■□□□□ 0.71

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