RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	NBPF1	Q3BBV0	1214 aa		33.58	■■■□□ 2.97
CIRBP-231	ENST00000591097	TRPM1	Q7Z4N2	1603 aa		33.57	■■■□□ 2.97
CIRBP-231	ENST00000591097	TRAK1	Q9UPV9	953 aa		33.56	■■■□□ 2.96
CIRBP-231	ENST00000591097	HSPA1L	P34931	641 aa		33.55	■■■□□ 2.96
CIRBP-231	ENST00000591097	PRAM1	Q96QH2	718 aa		33.55	■■■□□ 2.96
CIRBP-231	ENST00000591097	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.54	■■■□□ 2.96
CIRBP-231	ENST00000591097	NBPF8	Q3BBV2	869 aa		33.51	■■■□□ 2.95
CIRBP-231	ENST00000591097	C1orf167	Q5SNV9	1468 aa		33.48	■■■□□ 2.95
CIRBP-231	ENST00000591097	POGK	Q9P215	609 aa		33.47	■■■□□ 2.95
CIRBP-231	ENST00000591097	ADGRB2	O60241	1585 aa		33.46	■■■□□ 2.95
CIRBP-231	ENST00000591097	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.46	■■■□□ 2.95
CIRBP-231	ENST00000591097	BRINP3	Q76B58	766 aa		33.46	■■■□□ 2.95
CIRBP-231	ENST00000591097	CCER1	Q8TC90	406 aa	Predicted RBP	33.45	■■■□□ 2.95
CIRBP-231	ENST00000591097	FMN2	Q9NZ56	1722 aa		33.43	■■■□□ 2.94
CIRBP-231	ENST00000591097	GPRASP1	Q5JY77	1395 aa		33.42	■■■□□ 2.94
CIRBP-231	ENST00000591097	ROCK2	O75116	1388 aa	Known RBP	33.41	■■■□□ 2.94
CIRBP-231	ENST00000591097	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.41	■■■□□ 2.94
CIRBP-231	ENST00000591097	RALGAPB	Q86X10	1494 aa		33.4	■■■□□ 2.94
CIRBP-231	ENST00000591097	TIMELESS	Q9UNS1	1208 aa		33.38	■■■□□ 2.93
CIRBP-231	ENST00000591097	PHLPP1	O60346	1717 aa		33.36	■■■□□ 2.93
CIRBP-231	ENST00000591097	COL16A1	Q07092	1604 aa	Predicted RBP	33.35	■■■□□ 2.93
CIRBP-231	ENST00000591097	NHSL1	Q5SYE7	1610 aa		33.35	■■■□□ 2.93
CIRBP-231	ENST00000591097	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.35	■■■□□ 2.93
CIRBP-231	ENST00000591097	ORAI2	Q96SN7	254 aa		33.34	■■■□□ 2.93
CIRBP-231	ENST00000591097	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.33	■■■□□ 2.93
CIRBP-231	ENST00000591097	NUTM2F	A1L443	756 aa		33.3	■■■□□ 2.92
CIRBP-231	ENST00000591097	USP32	Q8NFA0	1604 aa		33.29	■■■□□ 2.92
CIRBP-231	ENST00000591097	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.28	■■■□□ 2.92
CIRBP-231	ENST00000591097	ANKAR	Q7Z5J8	1434 aa		33.27	■■■□□ 2.92
CIRBP-231	ENST00000591097	WASL	O00401	505 aa	Predicted RBP	33.27	■■■□□ 2.92
CIRBP-231	ENST00000591097	QRICH2	Q9H0J4	1663 aa		33.27	■■■□□ 2.92
CIRBP-231	ENST00000591097	RGPD8	O14715	1765 aa	Predicted RBP	33.26	■■■□□ 2.92
CIRBP-231	ENST00000591097	ESCO1	Q5FWF5	840 aa		33.26	■■■□□ 2.91
CIRBP-231	ENST00000591097	TULP4	Q9NRJ4	1543 aa		33.25	■■■□□ 2.91
CIRBP-231	ENST00000591097	DDX17	Q92841	729 aa	Known RBP	33.25	■■■□□ 2.91
CIRBP-231	ENST00000591097	CARD11	Q9BXL7	1154 aa		33.25	■■■□□ 2.91
CIRBP-231	ENST00000591097	EIF3A	Q14152	1382 aa	Known RBP	33.22	■■■□□ 2.91
CIRBP-231	ENST00000591097	PRR36	Q9H6K5	1346 aa		33.21	■■■□□ 2.91
CIRBP-231	ENST00000591097	KIF1A	Q12756	1690 aa		33.21	■■■□□ 2.91
CIRBP-231	ENST00000591097	ATP7B	P35670	1465 aa		33.19	■■■□□ 2.9
CIRBP-231	ENST00000591097	SOS2	Q07890	1332 aa	Predicted RBP	33.18	■■■□□ 2.9
CIRBP-231	ENST00000591097	JCAD	Q9P266	1359 aa		33.17	■■■□□ 2.9
CIRBP-231	ENST00000591097	CDK19	Q9BWU1	502 aa		33.16	■■■□□ 2.9
CIRBP-231	ENST00000591097	PXDN	Q92626	1479 aa		33.16	■■■□□ 2.9
CIRBP-231	ENST00000591097	NPHP3	Q7Z494	1330 aa		33.15	■■■□□ 2.9
CIRBP-231	ENST00000591097	FOXO3	O43524	673 aa		33.14	■■■□□ 2.9
CIRBP-231	ENST00000591097	PHF8	Q9UPP1	1060 aa		33.14	■■■□□ 2.9
CIRBP-231	ENST00000591097	SHPRH	Q149N8	1683 aa		33.14	■■■□□ 2.9
CIRBP-231	ENST00000591097	SBNO2	Q9Y2G9	1366 aa		33.13	■■■□□ 2.89
CIRBP-231	ENST00000591097	MED1	Q15648	1581 aa	Predicted RBP	33.11	■■■□□ 2.89
CIRBP-231	ENST00000591097	TOPAZ1	Q8N9V7	1692 aa		33.11	■■■□□ 2.89
CIRBP-231	ENST00000591097	LRRC59	Q96AG4	307 aa	Known RBP	33.1	■■■□□ 2.89
CIRBP-231	ENST00000591097	NUDT16	Q96DE0	195 aa	Known RBP	33.1	■■■□□ 2.89
CIRBP-231	ENST00000591097	ITSN1	Q15811	1721 aa		33.1	■■■□□ 2.89
CIRBP-231	ENST00000591097	XPC	Q01831	940 aa	Predicted RBP	33.06	■■■□□ 2.88
CIRBP-231	ENST00000591097	PMFBP1	Q8TBY8	1022 aa		33.06	■■■□□ 2.88
CIRBP-231	ENST00000591097	PNPLA6	Q8IY17	1366 aa		33.05	■■■□□ 2.88
CIRBP-231	ENST00000591097	EVC2	Q86UK5	1308 aa		33.03	■■■□□ 2.88
CIRBP-231	ENST00000591097	CABP2	Q9NPB3	220 aa		33.03	■■■□□ 2.88
CIRBP-231	ENST00000591097	SRPK2	P78362	688 aa	Known RBP	33.02	■■■□□ 2.88
CIRBP-231	ENST00000591097	CCDC61	Q9Y6R9	512 aa		33.02	■■■□□ 2.88
CIRBP-231	ENST00000591097	USP47	Q96K76	1375 aa		33.02	■■■□□ 2.88
CIRBP-231	ENST00000591097	SPATA31A6	Q5VVP1	1343 aa		33.02	■■■□□ 2.88
CIRBP-231	ENST00000591097	ST20-MTHFS	A0A0A6YYL1	179 aa		32.99	■■■□□ 2.87
CIRBP-231	ENST00000591097	KRT28	Q7Z3Y7	464 aa		32.99	■■■□□ 2.87
CIRBP-231	ENST00000591097	TESK2	Q96S53	571 aa		32.99	■■■□□ 2.87
CIRBP-231	ENST00000591097	LRP6	O75581	1613 aa		32.99	■■■□□ 2.87
CIRBP-231	ENST00000591097	POLR3A	O14802	1390 aa	Predicted RBP	32.97	■■■□□ 2.87
CIRBP-231	ENST00000591097	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.97	■■■□□ 2.87
CIRBP-231	ENST00000591097	PLEKHG3	A1L390	1219 aa		32.97	■■■□□ 2.87
CIRBP-231	ENST00000591097	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.96	■■■□□ 2.87
CIRBP-231	ENST00000591097	SPATA31A3	Q5VYP0	1347 aa		32.95	■■■□□ 2.87
CIRBP-231	ENST00000591097	PPIP5K1	Q6PFW1	1433 aa		32.95	■■■□□ 2.87
CIRBP-231	ENST00000591097	PSME1	Q06323	249 aa		32.95	■■■□□ 2.87
CIRBP-231	ENST00000591097	SBNO1	A3KN83	1393 aa		32.95	■■■□□ 2.87
CIRBP-231	ENST00000591097	NGDN	Q8NEJ9	315 aa	Known RBP	32.93	■■■□□ 2.86
CIRBP-231	ENST00000591097	TNS3	Q68CZ2	1445 aa		32.93	■■■□□ 2.86
CIRBP-231	ENST00000591097	DISP3	Q9P2K9	1392 aa		32.93	■■■□□ 2.86
CIRBP-231	ENST00000591097	ACE	P12821	1306 aa		32.9	■■■□□ 2.86
CIRBP-231	ENST00000591097	ATAD2	Q6PL18	1390 aa		32.89	■■■□□ 2.86
CIRBP-231	ENST00000591097	CABP1	Q9NZU7	370 aa		32.87	■■■□□ 2.85
CIRBP-231	ENST00000591097	ALS2	Q96Q42	1657 aa		32.87	■■■□□ 2.85
CIRBP-231	ENST00000591097	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.84	■■■□□ 2.85
CIRBP-231	ENST00000591097	NUTM2E	B1AL46	878 aa	Predicted RBP	32.84	■■■□□ 2.85
CIRBP-231	ENST00000591097	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.84	■■■□□ 2.85
CIRBP-231	ENST00000591097	ARHGEF10	O15013	1369 aa		32.83	■■■□□ 2.85
CIRBP-231	ENST00000591097	SLC24A1	O60721	1099 aa		32.83	■■■□□ 2.85
CIRBP-231	ENST00000591097	PUS7	Q96PZ0	661 aa	Known RBP	32.83	■■■□□ 2.85
CIRBP-231	ENST00000591097	RGS17	Q9UGC6	210 aa	Predicted RBP	32.78	■■■□□ 2.84
CIRBP-231	ENST00000591097	USP6	P35125	1406 aa		32.78	■■■□□ 2.84
CIRBP-231	ENST00000591097	PHF23	Q9BUL5	403 aa	Predicted RBP	32.77	■■■□□ 2.84
CIRBP-231	ENST00000591097	CPSF1	Q10570	1443 aa	Known RBP	32.77	■■■□□ 2.84
CIRBP-231	ENST00000591097	ABCA3	Q99758	1704 aa		32.76	■■■□□ 2.84
CIRBP-231	ENST00000591097	AKAP12	Q02952	1782 aa		32.76	■■■□□ 2.83
CIRBP-231	ENST00000591097	SSH2	Q76I76	1423 aa		32.76	■■■□□ 2.83
CIRBP-231	ENST00000591097	TMF1	P82094	1093 aa		32.75	■■■□□ 2.83
CIRBP-231	ENST00000591097	MEX3C	Q5U5Q3	659 aa	Known RBP	32.75	■■■□□ 2.83
CIRBP-231	ENST00000591097	LMOD2	Q6P5Q4	547 aa		32.75	■■■□□ 2.83
CIRBP-231	ENST00000591097	BRD4	O60885	1362 aa	Predicted RBP	32.75	■■■□□ 2.83
CIRBP-231	ENST00000591097	CD163L1	Q9NR16	1453 aa		32.75	■■■□□ 2.83

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