RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
SEH1L-208ENST00000590843 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
SEH1L-208ENST00000590843 SLC4A10Q6U841 1118 aa14.29□□□□□ -0.12
SEH1L-208ENST00000590843 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
SEH1L-208ENST00000590843 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
SEH1L-208ENST00000590843 KCNA6P17658 529 aa14.28□□□□□ -0.12
SEH1L-208ENST00000590843 RXRBP28702 533 aa14.28□□□□□ -0.12
SEH1L-208ENST00000590843 CFAP70Q5T0N1 1121 aa14.28□□□□□ -0.12
SEH1L-208ENST00000590843 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
SEH1L-208ENST00000590843 NUP160Q12769 1436 aa14.28□□□□□ -0.12
SEH1L-208ENST00000590843 ZMYM3Q14202 1370 aa14.28□□□□□ -0.12
SEH1L-208ENST00000590843 ZNF530Q6P9A1 599 aaPredicted RBP14.28□□□□□ -0.12
SEH1L-208ENST00000590843 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.12
SEH1L-208ENST00000590843 TEX13AQ9BXU3 409 aaPredicted RBP14.27□□□□□ -0.13
SEH1L-208ENST00000590843 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
SEH1L-208ENST00000590843 MTHFSP49914 203 aa14.27□□□□□ -0.13
SEH1L-208ENST00000590843 TOMM22Q9NS69 142 aa14.26□□□□□ -0.13
SEH1L-208ENST00000590843 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
SEH1L-208ENST00000590843 RPRD2Q5VT52 1461 aaKnown RBP14.26□□□□□ -0.13
SEH1L-208ENST00000590843 IDI1Q13907 227 aa14.26□□□□□ -0.13
SEH1L-208ENST00000590843 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
SEH1L-208ENST00000590843 MARCH6O60337 910 aa14.25□□□□□ -0.13
SEH1L-208ENST00000590843 DDB1Q16531 1140 aa14.25□□□□□ -0.13
SEH1L-208ENST00000590843 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
SEH1L-208ENST00000590843 CCDC34Q96HJ3 373 aa14.25□□□□□ -0.13
SEH1L-208ENST00000590843 TRPC5Q9UL62 973 aaPredicted RBP14.24□□□□□ -0.13
SEH1L-208ENST00000590843 SUPT6HQ7KZ85 1726 aaKnown RBP14.24□□□□□ -0.13
SEH1L-208ENST00000590843 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
SEH1L-208ENST00000590843 VPS53Q5VIR6 699 aa14.24□□□□□ -0.13
SEH1L-208ENST00000590843 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
SEH1L-208ENST00000590843 USP21Q9UK80 565 aa14.23□□□□□ -0.13
SEH1L-208ENST00000590843 PANK3Q9H999 370 aa14.23□□□□□ -0.13
SEH1L-208ENST00000590843 GNAI1P63096 354 aa14.22□□□□□ -0.13
SEH1L-208ENST00000590843 RFC4P35249 363 aa14.22□□□□□ -0.13
SEH1L-208ENST00000590843 TTLL12Q14166 644 aaPredicted RBP14.21□□□□□ -0.13
SEH1L-208ENST00000590843 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
SEH1L-208ENST00000590843 CDK13Q14004 1512 aaKnown RBP14.21□□□□□ -0.13
SEH1L-208ENST00000590843 KIAA1107Q9UPP5 1409 aa14.21□□□□□ -0.13
SEH1L-208ENST00000590843 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
SEH1L-208ENST00000590843 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
SEH1L-208ENST00000590843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.14
SEH1L-208ENST00000590843 ST5P78524 1137 aa14.21□□□□□ -0.14
SEH1L-208ENST00000590843 CERKQ8TCT0 537 aa14.21□□□□□ -0.14
SEH1L-208ENST00000590843 KDM5BQ9UGL1 1544 aa14.2□□□□□ -0.14
SEH1L-208ENST00000590843 CFAP74Q9C0B2 1584 aa14.2□□□□□ -0.14
SEH1L-208ENST00000590843 RAD21O60216 631 aa14.2□□□□□ -0.14
SEH1L-208ENST00000590843 NF2P35240 595 aa14.2□□□□□ -0.14
SEH1L-208ENST00000590843 RPGRQ92834 1020 aaKnown RBP14.2□□□□□ -0.14
SEH1L-208ENST00000590843 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
SEH1L-208ENST00000590843 BECN1Q14457 450 aa14.2□□□□□ -0.14
SEH1L-208ENST00000590843 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 FKBP8Q14318 412 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 SYNE3Q6ZMZ3 975 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
SEH1L-208ENST00000590843 PARP3Q9Y6F1 533 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 ZFYVE16Q7Z3T8 1539 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 G3BP1Q13283 466 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEH1L-208ENST00000590843 TFCP2L1Q9NZI6 479 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 ATP10BO94823 1461 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
SEH1L-208ENST00000590843 LMOD1P29536 600 aaPredicted RBP14.18□□□□□ -0.14
SEH1L-208ENST00000590843 GPR162Q16538 588 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 FLAD1Q8NFF5 587 aa14.18□□□□□ -0.14
SEH1L-208ENST00000590843 SLAIN2Q9P270 581 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 USP47Q96K76 1375 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 RBM5P52756 815 aaKnown RBP eCLIP14.17□□□□□ -0.14
SEH1L-208ENST00000590843 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
SEH1L-208ENST00000590843 ITPRIPQ8IWB1 547 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 CAMSAP2Q08AD1 1489 aa14.17□□□□□ -0.14
SEH1L-208ENST00000590843 API5Q9BZZ5 524 aaKnown RBP14.17□□□□□ -0.14
SEH1L-208ENST00000590843 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
SEH1L-208ENST00000590843 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 MAGI2Q86UL8 1455 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 ARHGEF10O15013 1369 aa14.16□□□□□ -0.14
SEH1L-208ENST00000590843 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
SEH1L-208ENST00000590843 CCDC30Q5VVM6 783 aa14.15□□□□□ -0.14
SEH1L-208ENST00000590843 MPHOSPH8Q99549 860 aa14.15□□□□□ -0.14
SEH1L-208ENST00000590843 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
SEH1L-208ENST00000590843 FKBP5Q13451 457 aaPredicted RBP14.14□□□□□ -0.15
SEH1L-208ENST00000590843 TBC1D2BQ9UPU7 963 aa14.14□□□□□ -0.15
SEH1L-208ENST00000590843 KDM6BO15054 1643 aa14.14□□□□□ -0.15
SEH1L-208ENST00000590843 IGHMBP2P38935 993 aaKnown RBP14.14□□□□□ -0.15
SEH1L-208ENST00000590843 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
SEH1L-208ENST00000590843 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
SEH1L-208ENST00000590843 AIMP1Q12904 312 aaKnown RBP14.13□□□□□ -0.15
SEH1L-208ENST00000590843 BICDL1Q6ZP65 573 aa14.13□□□□□ -0.15
SEH1L-208ENST00000590843 WWC2Q6AWC2 1192 aa14.13□□□□□ -0.15
SEH1L-208ENST00000590843 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
SEH1L-208ENST00000590843 RIPK4P57078 832 aa14.12□□□□□ -0.15
SEH1L-208ENST00000590843 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
SEH1L-208ENST00000590843 RWDD1Q9H446 243 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms