RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 Q3C1V9 767 aa10.2□□□□□ -0.78
CCDC58P3-201ENST00000590792 SH3D19Q5HYK7 790 aa10.2□□□□□ -0.78
CCDC58P3-201ENST00000590792 THAP11Q96EK4 314 aa10.2□□□□□ -0.78
CCDC58P3-201ENST00000590792 CECR2Q9BXF3 1484 aa10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 A0A0G2JS52 829 aa10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 SPSB2Q99619 263 aa10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
CCDC58P3-201ENST00000590792 C6orf229H3BNL8 230 aa10.18□□□□□ -0.78
CCDC58P3-201ENST00000590792 ADH1BP00325 375 aa10.18□□□□□ -0.78
CCDC58P3-201ENST00000590792 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
CCDC58P3-201ENST00000590792 SKIV2LQ15477 1246 aaKnown RBP10.17□□□□□ -0.78
CCDC58P3-201ENST00000590792 GJA5P36382 358 aa10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 QPCTQ16769 361 aa10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 PROCA1Q8NCQ7 364 aaPredicted RBP10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 CABLES1Q8TDN4 633 aa10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 SALL2Q9Y467 1007 aaPredicted RBP10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 CUX2O14529 1486 aa10.16□□□□□ -0.78
CCDC58P3-201ENST00000590792 MTMR2Q13614 643 aa10.15□□□□□ -0.78
CCDC58P3-201ENST00000590792 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
CCDC58P3-201ENST00000590792 S1PR4O95977 384 aa10.14□□□□□ -0.79
CCDC58P3-201ENST00000590792 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
CCDC58P3-201ENST00000590792 USB1Q9BQ65 265 aaKnown RBP10.14□□□□□ -0.79
CCDC58P3-201ENST00000590792 HRCP23327 699 aa10.13□□□□□ -0.79
CCDC58P3-201ENST00000590792 SLC6A16Q9GZN6 736 aa10.13□□□□□ -0.79
CCDC58P3-201ENST00000590792 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
CCDC58P3-201ENST00000590792 NUTM2BA6NNL0 878 aaPredicted RBP10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 NUTM2EB1AL46 878 aaPredicted RBP10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 NUTM2DQ5VT03 806 aaPredicted RBP10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 RETREG3Q86VR2 466 aa10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 NUTM2AQ8IVF1 878 aaPredicted RBP10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
CCDC58P3-201ENST00000590792 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
CCDC58P3-201ENST00000590792 PPP1R18Q6NYC8 613 aa10.11□□□□□ -0.79
CCDC58P3-201ENST00000590792 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC58P3-201ENST00000590792 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
CCDC58P3-201ENST00000590792 LILRB3O75022 631 aa10.1□□□□□ -0.79
CCDC58P3-201ENST00000590792 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
CCDC58P3-201ENST00000590792 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
CCDC58P3-201ENST00000590792 FBXO31Q5XUX0 539 aaPredicted RBP10.1□□□□□ -0.79
CCDC58P3-201ENST00000590792 RTL5Q5HYW3 569 aaPredicted RBP10.09□□□□□ -0.79
CCDC58P3-201ENST00000590792 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
CCDC58P3-201ENST00000590792 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
CCDC58P3-201ENST00000590792 CFAP99D6REC4 459 aa10.08□□□□□ -0.8
CCDC58P3-201ENST00000590792 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
CCDC58P3-201ENST00000590792 TSC1Q92574 1164 aa10.08□□□□□ -0.8
CCDC58P3-201ENST00000590792 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
CCDC58P3-201ENST00000590792 GGCXP38435 758 aa10.07□□□□□ -0.8
CCDC58P3-201ENST00000590792 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
CCDC58P3-201ENST00000590792 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
CCDC58P3-201ENST00000590792 JUNDP17535 347 aa10.05□□□□□ -0.8
CCDC58P3-201ENST00000590792 MMP16P51512 607 aa10.05□□□□□ -0.8
CCDC58P3-201ENST00000590792 FCF1Q9Y324 198 aaKnown RBP10.04□□□□□ -0.8
CCDC58P3-201ENST00000590792 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
CCDC58P3-201ENST00000590792 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
CCDC58P3-201ENST00000590792 RFC5P40937 340 aa10.02□□□□□ -0.81
CCDC58P3-201ENST00000590792 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
CCDC58P3-201ENST00000590792 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
CCDC58P3-201ENST00000590792 HELBQ8NG08 1087 aaPredicted RBP10.01□□□□□ -0.81
CCDC58P3-201ENST00000590792 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
CCDC58P3-201ENST00000590792 DESI1Q6ICB0 168 aa10□□□□□ -0.81
CCDC58P3-201ENST00000590792 CCDC24Q8N4L8 307 aa10□□□□□ -0.81
CCDC58P3-201ENST00000590792 NUDT12Q9BQG2 462 aa10□□□□□ -0.81
CCDC58P3-201ENST00000590792 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
CCDC58P3-201ENST00000590792 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
CCDC58P3-201ENST00000590792 AP1G2O75843 785 aa9.99□□□□□ -0.81
CCDC58P3-201ENST00000590792 CTDSPL2Q05D32 466 aa9.98□□□□□ -0.81
CCDC58P3-201ENST00000590792 PTPRNQ16849 979 aa9.98□□□□□ -0.81
CCDC58P3-201ENST00000590792 CCNYL3P0C7X3 344 aa9.97□□□□□ -0.81
CCDC58P3-201ENST00000590792 LYPD8Q6UX82 237 aa9.96□□□□□ -0.82
CCDC58P3-201ENST00000590792 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
CCDC58P3-201ENST00000590792 USP17L8P0C7I0 530 aa9.94□□□□□ -0.82
CCDC58P3-201ENST00000590792 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
CCDC58P3-201ENST00000590792 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
CCDC58P3-201ENST00000590792 MAP10Q9P2G4 905 aa9.94□□□□□ -0.82
CCDC58P3-201ENST00000590792 CTHP32929 405 aa9.93□□□□□ -0.82
CCDC58P3-201ENST00000590792 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
CCDC58P3-201ENST00000590792 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
CCDC58P3-201ENST00000590792 PTCRAQ6ISU1 281 aaPredicted RBP9.92□□□□□ -0.82
CCDC58P3-201ENST00000590792 F12P00748 615 aaPredicted RBP9.91□□□□□ -0.82
CCDC58P3-201ENST00000590792 SLC19A1P41440 591 aa9.91□□□□□ -0.82
CCDC58P3-201ENST00000590792 HMX1Q9NP08 348 aaPredicted RBP9.91□□□□□ -0.82
CCDC58P3-201ENST00000590792 EVA1BQ9NVM1 165 aa9.91□□□□□ -0.82
CCDC58P3-201ENST00000590792 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
CCDC58P3-201ENST00000590792 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
CCDC58P3-201ENST00000590792 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
CCDC58P3-201ENST00000590792 UNC13AQ9UPW8 1703 aa9.88□□□□□ -0.83
CCDC58P3-201ENST00000590792 TRIM32Q13049 653 aa9.88□□□□□ -0.83
CCDC58P3-201ENST00000590792 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
CCDC58P3-201ENST00000590792 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
CCDC58P3-201ENST00000590792 RPIAP49247 311 aa9.86□□□□□ -0.83
CCDC58P3-201ENST00000590792 NR6A1Q15406 480 aa9.86□□□□□ -0.83
CCDC58P3-201ENST00000590792 SPRYD7Q5W111 196 aa9.86□□□□□ -0.83
CCDC58P3-201ENST00000590792 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
CCDC58P3-201ENST00000590792 SNRKQ9NRH2 765 aa9.86□□□□□ -0.83
CCDC58P3-201ENST00000590792 LAPTM4AQ15012 233 aa9.85□□□□□ -0.83
CCDC58P3-201ENST00000590792 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms