RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
NPC1-209ENST00000590723 HLA-CQ95604 372 aa13.91□□□□□ -0.18
NPC1-209ENST00000590723 PRKD2Q9BZL6 878 aa13.91□□□□□ -0.18
NPC1-209ENST00000590723 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
NPC1-209ENST00000590723 MOXD2PA6NHM9 499 aa13.9□□□□□ -0.18
NPC1-209ENST00000590723 GUCA2AQ02747 115 aa13.89□□□□□ -0.19
NPC1-209ENST00000590723 FAM160A2Q8N612 972 aaPredicted RBP13.89□□□□□ -0.19
NPC1-209ENST00000590723 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
NPC1-209ENST00000590723 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
NPC1-209ENST00000590723 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
NPC1-209ENST00000590723 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
NPC1-209ENST00000590723 RETREG3Q86VR2 466 aa13.88□□□□□ -0.19
NPC1-209ENST00000590723 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
NPC1-209ENST00000590723 NDUFV2P19404 249 aa13.87□□□□□ -0.19
NPC1-209ENST00000590723 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
NPC1-209ENST00000590723 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
NPC1-209ENST00000590723 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
NPC1-209ENST00000590723 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
NPC1-209ENST00000590723 SPTLC1O15269 473 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 SLC19A1P41440 591 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 MMP16P51512 607 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 MTMR2Q13614 643 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 PCDHGC3Q9UN70 934 aa13.84□□□□□ -0.19
NPC1-209ENST00000590723 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
NPC1-209ENST00000590723 PRDM9Q9NQV7 894 aa13.82□□□□□ -0.2
NPC1-209ENST00000590723 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
NPC1-209ENST00000590723 NEUROD2Q15784 382 aa13.81□□□□□ -0.2
NPC1-209ENST00000590723 PRPF38BQ5VTL8 546 aaKnown RBP13.81□□□□□ -0.2
NPC1-209ENST00000590723 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
NPC1-209ENST00000590723 ZBTB24O43167 697 aaPredicted RBP13.8□□□□□ -0.2
NPC1-209ENST00000590723 TUSC1Q2TAM9 212 aa13.8□□□□□ -0.2
NPC1-209ENST00000590723 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
NPC1-209ENST00000590723 IRX2Q9BZI1 471 aaPredicted RBP13.8□□□□□ -0.2
NPC1-209ENST00000590723 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
NPC1-209ENST00000590723 JUNDP17535 347 aa13.79□□□□□ -0.2
NPC1-209ENST00000590723 RPIAP49247 311 aa13.78□□□□□ -0.2
NPC1-209ENST00000590723 CLK2P49760 499 aaKnown RBP13.77□□□□□ -0.21
NPC1-209ENST00000590723 LAPTM4AQ15012 233 aa13.76□□□□□ -0.21
NPC1-209ENST00000590723 FAM117AQ9C073 453 aa13.76□□□□□ -0.21
NPC1-209ENST00000590723 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
NPC1-209ENST00000590723 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
NPC1-209ENST00000590723 DESI1Q6ICB0 168 aa13.75□□□□□ -0.21
NPC1-209ENST00000590723 PRR7Q8TB68 274 aa13.75□□□□□ -0.21
NPC1-209ENST00000590723 ZNF598Q86UK7 904 aaKnown RBP13.74□□□□□ -0.21
NPC1-209ENST00000590723 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
NPC1-209ENST00000590723 NUTM2BA6NNL0 878 aaPredicted RBP13.73□□□□□ -0.21
NPC1-209ENST00000590723 NUTM2EB1AL46 878 aaPredicted RBP13.73□□□□□ -0.21
NPC1-209ENST00000590723 HRCP23327 699 aa13.73□□□□□ -0.21
NPC1-209ENST00000590723 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
NPC1-209ENST00000590723 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
NPC1-209ENST00000590723 LIAT1Q6ZQX7 453 aa13.73□□□□□ -0.21
NPC1-209ENST00000590723 NUTM2AQ8IVF1 878 aaPredicted RBP13.73□□□□□ -0.21
NPC1-209ENST00000590723 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
NPC1-209ENST00000590723 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
NPC1-209ENST00000590723 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
NPC1-209ENST00000590723 PLA2G2CQ5R387 149 aa13.72□□□□□ -0.21
NPC1-209ENST00000590723 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
NPC1-209ENST00000590723 LIMD1Q9UGP4 676 aa13.72□□□□□ -0.21
NPC1-209ENST00000590723 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
NPC1-209ENST00000590723 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
NPC1-209ENST00000590723 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
NPC1-209ENST00000590723 PTPRNQ16849 979 aa13.7□□□□□ -0.22
NPC1-209ENST00000590723 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
NPC1-209ENST00000590723 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
NPC1-209ENST00000590723 EMID1Q96A84 441 aaPredicted RBP13.69□□□□□ -0.22
NPC1-209ENST00000590723 LILRB3O75022 631 aa13.67□□□□□ -0.22
NPC1-209ENST00000590723 CCNYL3P0C7X3 344 aa13.67□□□□□ -0.22
NPC1-209ENST00000590723 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
NPC1-209ENST00000590723 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
NPC1-209ENST00000590723 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
NPC1-209ENST00000590723 GFRA3O60609 400 aa13.65□□□□□ -0.22
NPC1-209ENST00000590723 GOPCQ9HD26 462 aa13.65□□□□□ -0.22
NPC1-209ENST00000590723 PDZRN3Q9UPQ7 1066 aa13.65□□□□□ -0.22
NPC1-209ENST00000590723 TRIM32Q13049 653 aa13.64□□□□□ -0.23
NPC1-209ENST00000590723 QPCTQ16769 361 aa13.64□□□□□ -0.23
NPC1-209ENST00000590723 CFAP99D6REC4 459 aa13.63□□□□□ -0.23
NPC1-209ENST00000590723 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
NPC1-209ENST00000590723 TSC1Q92574 1164 aa13.63□□□□□ -0.23
NPC1-209ENST00000590723 PRR20EP86478 221 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 PRR20CP86479 221 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 PRR20DP86480 221 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 PRR20BP86481 221 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 PRR20AP86496 221 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 LYPD8Q6UX82 237 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 EVA1BQ9NVM1 165 aa13.62□□□□□ -0.23
NPC1-209ENST00000590723 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
NPC1-209ENST00000590723 PCMTD1Q96MG8 357 aaPredicted RBP13.6□□□□□ -0.23
NPC1-209ENST00000590723 KCNH2Q12809 1159 aa13.59□□□□□ -0.23
NPC1-209ENST00000590723 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
NPC1-209ENST00000590723 WNT7BP56706 349 aa13.58□□□□□ -0.24
NPC1-209ENST00000590723 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.58□□□□□ -0.24
NPC1-209ENST00000590723 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
NPC1-209ENST00000590723 CTHP32929 405 aa13.57□□□□□ -0.24
NPC1-209ENST00000590723 FOXC1Q12948 553 aa13.56□□□□□ -0.24
NPC1-209ENST00000590723 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
NPC1-209ENST00000590723 GDF9O60383 454 aa13.55□□□□□ -0.24
NPC1-209ENST00000590723 PPP2R2DQ66LE6 453 aa13.55□□□□□ -0.24
NPC1-209ENST00000590723 Q6ZNB5 142 aa13.55□□□□□ -0.24
NPC1-209ENST00000590723 PROCA1Q8NCQ7 364 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms