RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
GCDH-212ENST00000590530 KNDC1Q76NI1 1749 aa23.37■■□□□ 1.33
GCDH-212ENST00000590530 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
GCDH-212ENST00000590530 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
GCDH-212ENST00000590530 PANK3Q9H999 370 aa23.36■■□□□ 1.33
GCDH-212ENST00000590530 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
GCDH-212ENST00000590530 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
GCDH-212ENST00000590530 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
GCDH-212ENST00000590530 CDK19Q9BWU1 502 aa23.34■■□□□ 1.33
GCDH-212ENST00000590530 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
GCDH-212ENST00000590530 XRN1Q8IZH2 1706 aaKnown RBP23.32■■□□□ 1.32
GCDH-212ENST00000590530 MYOM1P52179 1685 aa23.32■■□□□ 1.32
GCDH-212ENST00000590530 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
GCDH-212ENST00000590530 PER1O15534 1290 aaPredicted RBP23.32■■□□□ 1.32
GCDH-212ENST00000590530 SLC12A5Q9H2X9 1139 aa23.32■■□□□ 1.32
GCDH-212ENST00000590530 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
GCDH-212ENST00000590530 TMC1Q8TDI8 760 aa23.3■■□□□ 1.32
GCDH-212ENST00000590530 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
GCDH-212ENST00000590530 WASLO00401 505 aaPredicted RBP23.28■■□□□ 1.32
GCDH-212ENST00000590530 CENPBP07199 599 aaPredicted RBP23.28■■□□□ 1.32
GCDH-212ENST00000590530 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
GCDH-212ENST00000590530 STRCQ7RTU9 1775 aa23.26■■□□□ 1.31
GCDH-212ENST00000590530 CARD14Q9BXL6 1004 aa23.26■■□□□ 1.31
GCDH-212ENST00000590530 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
GCDH-212ENST00000590530 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
GCDH-212ENST00000590530 PUS7Q96PZ0 661 aaKnown RBP23.24■■□□□ 1.31
GCDH-212ENST00000590530 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
GCDH-212ENST00000590530 PRR36Q9H6K5 1346 aa23.22■■□□□ 1.31
GCDH-212ENST00000590530 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
GCDH-212ENST00000590530 ATAD2Q6PL18 1390 aa23.19■■□□□ 1.3
GCDH-212ENST00000590530 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
GCDH-212ENST00000590530 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
GCDH-212ENST00000590530 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
GCDH-212ENST00000590530 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
GCDH-212ENST00000590530 CCDC184Q52MB2 194 aa23.17■■□□□ 1.3
GCDH-212ENST00000590530 NWD1Q149M9 1564 aa23.17■■□□□ 1.3
GCDH-212ENST00000590530 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
GCDH-212ENST00000590530 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
GCDH-212ENST00000590530 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
GCDH-212ENST00000590530 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
GCDH-212ENST00000590530 A0A1W2PP64 1363 aa23.15■■□□□ 1.3
GCDH-212ENST00000590530 PROSER2Q86WR7 435 aaPredicted RBP23.15■■□□□ 1.3
GCDH-212ENST00000590530 ATP7BP35670 1465 aa23.14■■□□□ 1.3
GCDH-212ENST00000590530 ANKRD36BQ8N2N9 1353 aa23.13■■□□□ 1.29
GCDH-212ENST00000590530 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
GCDH-212ENST00000590530 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
GCDH-212ENST00000590530 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
GCDH-212ENST00000590530 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
GCDH-212ENST00000590530 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
GCDH-212ENST00000590530 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
GCDH-212ENST00000590530 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
GCDH-212ENST00000590530 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
GCDH-212ENST00000590530 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.29
GCDH-212ENST00000590530 PARD3Q8TEW0 1356 aa23.08■■□□□ 1.28
GCDH-212ENST00000590530 RALBP1Q15311 655 aa23.07■■□□□ 1.28
GCDH-212ENST00000590530 TMEM94Q12767 1356 aa23.07■■□□□ 1.28
GCDH-212ENST00000590530 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
GCDH-212ENST00000590530 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
GCDH-212ENST00000590530 PMFBP1Q8TBY8 1022 aa23.05■■□□□ 1.28
GCDH-212ENST00000590530 CPSF1Q10570 1443 aaKnown RBP23.04■■□□□ 1.28
GCDH-212ENST00000590530 HDGFL2Q7Z4V5 671 aaPredicted RBP23.04■■□□□ 1.28
GCDH-212ENST00000590530 CDC42BPGQ6DT37 1551 aa23.02■■□□□ 1.28
GCDH-212ENST00000590530 ACEP12821 1306 aa23.02■■□□□ 1.28
GCDH-212ENST00000590530 TOPAZ1Q8N9V7 1692 aa23.02■■□□□ 1.28
GCDH-212ENST00000590530 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
GCDH-212ENST00000590530 RGPD8O14715 1765 aaPredicted RBP23.02■■□□□ 1.28
GCDH-212ENST00000590530 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
GCDH-212ENST00000590530 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
GCDH-212ENST00000590530 MRS2Q9HD23 443 aa23.01■■□□□ 1.27
GCDH-212ENST00000590530 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
GCDH-212ENST00000590530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
GCDH-212ENST00000590530 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
GCDH-212ENST00000590530 GGNBP2Q9H3C7 697 aa22.99■■□□□ 1.27
GCDH-212ENST00000590530 C19orf44Q9H6X5 657 aa22.99■■□□□ 1.27
GCDH-212ENST00000590530 FYB1O15117 783 aa22.98■■□□□ 1.27
GCDH-212ENST00000590530 ANKARQ7Z5J8 1434 aa22.98■■□□□ 1.27
GCDH-212ENST00000590530 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
GCDH-212ENST00000590530 BRD4O60885 1362 aaPredicted RBP22.98■■□□□ 1.27
GCDH-212ENST00000590530 LRRC7Q96NW7 1537 aa22.97■■□□□ 1.27
GCDH-212ENST00000590530 TNNT2P45379 298 aaPredicted RBP22.97■■□□□ 1.27
GCDH-212ENST00000590530 ORAI2Q96SN7 254 aa22.96■■□□□ 1.27
GCDH-212ENST00000590530 ZRANB1Q9UGI0 708 aa22.96■■□□□ 1.27
GCDH-212ENST00000590530 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
GCDH-212ENST00000590530 NME9Q86XW9 330 aa22.95■■□□□ 1.26
GCDH-212ENST00000590530 ESCO1Q5FWF5 840 aa22.94■■□□□ 1.26
GCDH-212ENST00000590530 MORC1Q86VD1 984 aa22.94■■□□□ 1.26
GCDH-212ENST00000590530 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
GCDH-212ENST00000590530 XIRP1Q702N8 1843 aaKnown RBP22.93■■□□□ 1.26
GCDH-212ENST00000590530 POLR3AO14802 1390 aaPredicted RBP22.93■■□□□ 1.26
GCDH-212ENST00000590530 EDC4Q6P2E9 1401 aaKnown RBP22.93■■□□□ 1.26
GCDH-212ENST00000590530 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
GCDH-212ENST00000590530 PHF8Q9UPP1 1060 aa22.92■■□□□ 1.26
GCDH-212ENST00000590530 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
GCDH-212ENST00000590530 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
GCDH-212ENST00000590530 USP6P35125 1406 aa22.91■■□□□ 1.26
GCDH-212ENST00000590530 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
GCDH-212ENST00000590530 FBLN1P23142 703 aa22.9■■□□□ 1.26
GCDH-212ENST00000590530 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
GCDH-212ENST00000590530 ATF3P18847 181 aa22.9■■□□□ 1.26
GCDH-212ENST00000590530 TTC21BQ7Z4L5 1316 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms