RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
APOC1-206ENST00000590334 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
APOC1-206ENST00000590334 POGKQ9P215 609 aa17.04■□□□□ 0.32
APOC1-206ENST00000590334 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
APOC1-206ENST00000590334 DCCP43146 1447 aa17.03■□□□□ 0.32
APOC1-206ENST00000590334 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
APOC1-206ENST00000590334 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
APOC1-206ENST00000590334 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
APOC1-206ENST00000590334 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
APOC1-206ENST00000590334 RGPD8O14715 1765 aaPredicted RBP17■□□□□ 0.31
APOC1-206ENST00000590334 TESK2Q96S53 571 aa16.99■□□□□ 0.31
APOC1-206ENST00000590334 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
APOC1-206ENST00000590334 MSH6P52701 1360 aa16.99■□□□□ 0.31
APOC1-206ENST00000590334 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
APOC1-206ENST00000590334 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
APOC1-206ENST00000590334 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
APOC1-206ENST00000590334 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
APOC1-206ENST00000590334 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
APOC1-206ENST00000590334 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
APOC1-206ENST00000590334 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
APOC1-206ENST00000590334 TOPAZ1Q8N9V7 1692 aa16.96■□□□□ 0.31
APOC1-206ENST00000590334 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
APOC1-206ENST00000590334 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
APOC1-206ENST00000590334 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
APOC1-206ENST00000590334 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
APOC1-206ENST00000590334 MST1RQ04912 1400 aa16.93■□□□□ 0.3
APOC1-206ENST00000590334 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
APOC1-206ENST00000590334 ATF3P18847 181 aa16.92■□□□□ 0.3
APOC1-206ENST00000590334 ANKARQ7Z5J8 1434 aa16.92■□□□□ 0.3
APOC1-206ENST00000590334 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
APOC1-206ENST00000590334 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
APOC1-206ENST00000590334 ATP7BP35670 1465 aa16.91■□□□□ 0.3
APOC1-206ENST00000590334 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
APOC1-206ENST00000590334 TMF1P82094 1093 aa16.9■□□□□ 0.3
APOC1-206ENST00000590334 MYOM1P52179 1685 aa16.9■□□□□ 0.3
APOC1-206ENST00000590334 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
APOC1-206ENST00000590334 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
APOC1-206ENST00000590334 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
APOC1-206ENST00000590334 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
APOC1-206ENST00000590334 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
APOC1-206ENST00000590334 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
APOC1-206ENST00000590334 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
APOC1-206ENST00000590334 ATAD2Q6PL18 1390 aa16.86■□□□□ 0.29
APOC1-206ENST00000590334 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
APOC1-206ENST00000590334 TOM1O60784 492 aa16.85■□□□□ 0.29
APOC1-206ENST00000590334 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
APOC1-206ENST00000590334 NUDT16Q96DE0 195 aaKnown RBP16.85■□□□□ 0.29
APOC1-206ENST00000590334 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
APOC1-206ENST00000590334 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
APOC1-206ENST00000590334 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
APOC1-206ENST00000590334 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
APOC1-206ENST00000590334 UBAP1LF5GYI3 381 aa16.82■□□□□ 0.28
APOC1-206ENST00000590334 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
APOC1-206ENST00000590334 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
APOC1-206ENST00000590334 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
APOC1-206ENST00000590334 KIF7Q2M1P5 1343 aa16.8■□□□□ 0.28
APOC1-206ENST00000590334 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
APOC1-206ENST00000590334 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
APOC1-206ENST00000590334 AHDC1Q5TGY3 1603 aaPredicted RBP16.8■□□□□ 0.28
APOC1-206ENST00000590334 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
APOC1-206ENST00000590334 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
APOC1-206ENST00000590334 BRINP3Q76B58 766 aa16.79■□□□□ 0.28
APOC1-206ENST00000590334 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
APOC1-206ENST00000590334 NRKQ7Z2Y5 1582 aa16.78■□□□□ 0.28
APOC1-206ENST00000590334 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
APOC1-206ENST00000590334 PHF8Q9UPP1 1060 aa16.78■□□□□ 0.28
APOC1-206ENST00000590334 TRPM3Q9HCF6 1732 aaPredicted RBP16.78■□□□□ 0.28
APOC1-206ENST00000590334 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
APOC1-206ENST00000590334 PHLPP1O60346 1717 aa16.77■□□□□ 0.28
APOC1-206ENST00000590334 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
APOC1-206ENST00000590334 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
APOC1-206ENST00000590334 PXDNQ92626 1479 aa16.75■□□□□ 0.27
APOC1-206ENST00000590334 ACEP12821 1306 aa16.74■□□□□ 0.27
APOC1-206ENST00000590334 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
APOC1-206ENST00000590334 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
APOC1-206ENST00000590334 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
APOC1-206ENST00000590334 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
APOC1-206ENST00000590334 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
APOC1-206ENST00000590334 ANKRD36BQ8N2N9 1353 aa16.73■□□□□ 0.27
APOC1-206ENST00000590334 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
APOC1-206ENST00000590334 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
APOC1-206ENST00000590334 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
APOC1-206ENST00000590334 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
APOC1-206ENST00000590334 USP6P35125 1406 aa16.71■□□□□ 0.27
APOC1-206ENST00000590334 FOXO3O43524 673 aa16.71■□□□□ 0.27
APOC1-206ENST00000590334 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
APOC1-206ENST00000590334 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
APOC1-206ENST00000590334 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
APOC1-206ENST00000590334 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
APOC1-206ENST00000590334 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
APOC1-206ENST00000590334 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
APOC1-206ENST00000590334 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
APOC1-206ENST00000590334 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
APOC1-206ENST00000590334 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
APOC1-206ENST00000590334 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
APOC1-206ENST00000590334 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
APOC1-206ENST00000590334 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
APOC1-206ENST00000590334 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
APOC1-206ENST00000590334 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
APOC1-206ENST00000590334 PSME1Q06323 249 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms