RNA–Protein interactions for RNA: ENST00000590104.1

LAMA3-211, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-211ENST00000590104 CLIP1P30622 1438 aa10.48□□□□□ -0.73
LAMA3-211ENST00000590104 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
LAMA3-211ENST00000590104 POLR1AO95602 1720 aaPredicted RBP10.47□□□□□ -0.73
LAMA3-211ENST00000590104 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
LAMA3-211ENST00000590104 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
LAMA3-211ENST00000590104 ARHGAP35Q9NRY4 1499 aa10.47□□□□□ -0.73
LAMA3-211ENST00000590104 LRRC7Q96NW7 1537 aa10.47□□□□□ -0.73
LAMA3-211ENST00000590104 VWDEQ8N2E2 1590 aa10.47□□□□□ -0.73
LAMA3-211ENST00000590104 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
LAMA3-211ENST00000590104 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
LAMA3-211ENST00000590104 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.73
LAMA3-211ENST00000590104 ZMYM3Q14202 1370 aa10.46□□□□□ -0.74
LAMA3-211ENST00000590104 DIP2CQ9Y2E4 1556 aa10.46□□□□□ -0.74
LAMA3-211ENST00000590104 NEURL4Q96JN8 1562 aa10.45□□□□□ -0.74
LAMA3-211ENST00000590104 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
LAMA3-211ENST00000590104 FOSBP53539 338 aa10.45□□□□□ -0.74
LAMA3-211ENST00000590104 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
LAMA3-211ENST00000590104 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
LAMA3-211ENST00000590104 STRCP1A6NGW2 1772 aa10.44□□□□□ -0.74
LAMA3-211ENST00000590104 AGLP35573 1532 aa10.44□□□□□ -0.74
LAMA3-211ENST00000590104 PTPREP23469 700 aa10.44□□□□□ -0.74
LAMA3-211ENST00000590104 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
LAMA3-211ENST00000590104 CASKIN1Q8WXD9 1431 aa10.43□□□□□ -0.74
LAMA3-211ENST00000590104 EVI5O60447 810 aa10.43□□□□□ -0.74
LAMA3-211ENST00000590104 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
LAMA3-211ENST00000590104 CCDC18Q5T9S5 1454 aa10.42□□□□□ -0.74
LAMA3-211ENST00000590104 RXRBP28702 533 aa10.42□□□□□ -0.74
LAMA3-211ENST00000590104 ABCA6Q8N139 1617 aa10.42□□□□□ -0.74
LAMA3-211ENST00000590104 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
LAMA3-211ENST00000590104 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
LAMA3-211ENST00000590104 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
LAMA3-211ENST00000590104 REREQ9P2R6 1566 aa10.4□□□□□ -0.74
LAMA3-211ENST00000590104 CDK13Q14004 1512 aaKnown RBP10.4□□□□□ -0.74
LAMA3-211ENST00000590104 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
LAMA3-211ENST00000590104 ZNF772Q68DY9 489 aaPredicted RBP10.4□□□□□ -0.74
LAMA3-211ENST00000590104 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
LAMA3-211ENST00000590104 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
LAMA3-211ENST00000590104 PTPN5P54829 565 aa10.39□□□□□ -0.75
LAMA3-211ENST00000590104 MEX3CQ5U5Q3 659 aaKnown RBP10.39□□□□□ -0.75
LAMA3-211ENST00000590104 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
LAMA3-211ENST00000590104 GOLGA8CPA6NN73 597 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 KDM5CP41229 1560 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 MFSD10Q14728 455 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 ANKLE2Q86XL3 938 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
LAMA3-211ENST00000590104 KIF14Q15058 1648 aa10.36□□□□□ -0.75
LAMA3-211ENST00000590104 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
LAMA3-211ENST00000590104 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
LAMA3-211ENST00000590104 FAM135BQ49AJ0 1406 aa10.36□□□□□ -0.75
LAMA3-211ENST00000590104 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
LAMA3-211ENST00000590104 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
LAMA3-211ENST00000590104 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
LAMA3-211ENST00000590104 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
LAMA3-211ENST00000590104 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
LAMA3-211ENST00000590104 SYNMO15061 1565 aa10.35□□□□□ -0.75
LAMA3-211ENST00000590104 NPHP4O75161 1426 aaPredicted RBP10.35□□□□□ -0.75
LAMA3-211ENST00000590104 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
LAMA3-211ENST00000590104 BHMG1C9JSJ3 638 aaPredicted RBP10.35□□□□□ -0.75
LAMA3-211ENST00000590104 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
LAMA3-211ENST00000590104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.35□□□□□ -0.75
LAMA3-211ENST00000590104 ROBO1Q9Y6N7 1651 aa10.34□□□□□ -0.75
LAMA3-211ENST00000590104 RSPH4AQ5TD94 716 aa10.34□□□□□ -0.75
LAMA3-211ENST00000590104 XIRP1Q702N8 1843 aaKnown RBP10.34□□□□□ -0.75
LAMA3-211ENST00000590104 MLH3Q9UHC1 1453 aa10.34□□□□□ -0.75
LAMA3-211ENST00000590104 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
LAMA3-211ENST00000590104 CFDP1Q9UEE9 299 aaPredicted RBP10.33□□□□□ -0.76
LAMA3-211ENST00000590104 LRP6O75581 1613 aa10.33□□□□□ -0.76
LAMA3-211ENST00000590104 IQGAP1P46940 1657 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 PLEKHH2Q8IVE3 1493 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
LAMA3-211ENST00000590104 JCADQ9P266 1359 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 WNT2BQ93097 391 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 NBPF3Q9H094 633 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 KIAA1107Q9UPP5 1409 aa10.32□□□□□ -0.76
LAMA3-211ENST00000590104 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
LAMA3-211ENST00000590104 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
LAMA3-211ENST00000590104 CCNB3Q8WWL7 1395 aa10.31□□□□□ -0.76
LAMA3-211ENST00000590104 YY1P25490 414 aa10.31□□□□□ -0.76
LAMA3-211ENST00000590104 RGS12O14924 1447 aa10.3□□□□□ -0.76
LAMA3-211ENST00000590104 SPAG9O60271 1321 aaKnown RBP10.3□□□□□ -0.76
LAMA3-211ENST00000590104 ABCC1P33527 1531 aa10.29□□□□□ -0.76
LAMA3-211ENST00000590104 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
LAMA3-211ENST00000590104 ZNF777Q9ULD5 760 aaPredicted RBP10.29□□□□□ -0.76
LAMA3-211ENST00000590104 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
LAMA3-211ENST00000590104 MED14O60244 1454 aa10.29□□□□□ -0.76
LAMA3-211ENST00000590104 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
LAMA3-211ENST00000590104 GGT6Q6P531 493 aa10.28□□□□□ -0.76
LAMA3-211ENST00000590104 KIDINS220Q9ULH0 1771 aa10.28□□□□□ -0.76
LAMA3-211ENST00000590104 GPATCH8Q9UKJ3 1502 aaKnown RBP10.28□□□□□ -0.76
LAMA3-211ENST00000590104 DEPDC5O75140 1603 aa10.27□□□□□ -0.77
LAMA3-211ENST00000590104 HNRNPMP52272 730 aaKnown RBP eCLIP10.27□□□□□ -0.77
LAMA3-211ENST00000590104 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
LAMA3-211ENST00000590104 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
LAMA3-211ENST00000590104 FBXO31Q5XUX0 539 aaPredicted RBP10.26□□□□□ -0.77
LAMA3-211ENST00000590104 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
LAMA3-211ENST00000590104 LRP5O75197 1615 aa10.25□□□□□ -0.77
LAMA3-211ENST00000590104 PHF14O94880 888 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms