RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	FAM135A	Q9P2D6	1515 aa		11.64	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	RANGAP1	P46060	587 aa	Predicted RBP	11.63	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	VARS2	Q5ST30	1063 aa	Known RBP	11.63	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	5e-9	■□□□□ 9.4
ATP6V0A1-222	ENST00000589727	RTN4	Q9NQC3	1192 aa	Known RBP	11.63	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	ATAD2	Q6PL18	1390 aa		11.63	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	PRX	Q9BXM0	1461 aa		11.63	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	IQGAP1	P46940	1657 aa		11.62	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	ROBO1	Q9Y6N7	1651 aa		11.62	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	SLC34A2	O95436	690 aa		11.62	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	KIDINS220	Q9ULH0	1771 aa		11.62	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	RGS12	O14924	1447 aa		11.61	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	KDM5D	Q9BY66	1539 aa		11.61	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	FOXK1	P85037	733 aa		11.61	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.61	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	PLPP6	Q8IY26	295 aa		11.6	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	PCDHGA4	Q9Y5G9	962 aa		11.6	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	SPAG9	O60271	1321 aa	Known RBP	11.6	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	UGGT1	Q9NYU2	1555 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	LRRC9	Q6ZRR7	1453 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	TMEM94	Q12767	1356 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	YY1	P25490	414 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	RBM6	P78332	1123 aa	Known RBP	11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	DSG2	Q14126	1118 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	AFF2	P51816	1311 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	ITSN2	Q9NZM3	1697 aa		11.59	□□□□□ -0.55
ATP6V0A1-222	ENST00000589727	KRTAP3-3	Q9BYR6	98 aa		11.58	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	KRTAP3-2	Q9BYR7	98 aa		11.58	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	NLRP1	Q9C000	1473 aa		11.57	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	NUDT7	P0C024	238 aa		11.57	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	FGD6	Q6ZV73	1430 aa		11.57	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	MIA2	Q96PC5	1412 aa		11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	QTRT2	Q9H974	415 aa	Known RBP	11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	SLAIN2	Q9P270	581 aa		11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	A2M	P01023	1474 aa		11.56	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PHLPP1	O60346	1717 aa		11.55	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	CCDC125	Q86Z20	511 aa		11.55	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	CRISPLD2	Q9H0B8	497 aa		11.55	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	KIF14	Q15058	1648 aa		11.54	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	SPNS2	Q8IVW8	549 aa		11.54	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	ATP7A	Q04656	1500 aa		11.54	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PZP	P20742	1482 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PDE4A	P27815	886 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PROSER2	Q86WR7	435 aa	Predicted RBP	11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	ZNF687	Q8N1G0	1237 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PTCD2	Q8WV60	388 aa	Known RBP	11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	BBX	Q8WY36	941 aa	Predicted RBP	11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	NGLY1	Q96IV0	654 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	PLXNC1	O60486	1568 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	SAMD9L	Q8IVG5	1584 aa		11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	XIRP1	Q702N8	1843 aa	Known RBP	11.53	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	CLIP1	P30622	1438 aa		11.52	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	TRO	Q12816	1431 aa	Predicted RBP	11.52	□□□□□ -0.56
ATP6V0A1-222	ENST00000589727	LRP5	O75197	1615 aa		11.52	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	COL16A1	Q07092	1604 aa	Predicted RBP	11.5	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	SENP3-EIF4A1	A0A087X0R7	540 aa		11.5	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	LHX6	Q9UPM6	363 aa		11.5	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	MSH6	P52701	1360 aa		11.5	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	PPP1R15B	Q5SWA1	713 aa		11.49	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	TXNDC2	Q86VQ3	553 aa		11.49	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.49	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	SCAF11	Q99590	1463 aa	Known RBP	11.49	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	ZC3H13	Q5T200	1668 aa	Known RBP	11.49	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	TBC1D12	O60347	775 aa		11.48	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	KCNA6	P17658	529 aa		11.48	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	5e-9	■■■■□ 19.3
ATP6V0A1-222	ENST00000589727	C8orf37	Q96NL8	207 aa		11.48	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	WASHC2C	Q9Y4E1	1318 aa		11.48	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	EP400	Q96L91	3159 aa		11.48	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	CDC42BPB	Q9Y5S2	1711 aa		11.47	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	MAP3K1	Q13233	1512 aa		11.47	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	LTK	P29376	864 aa		11.47	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	MMRN1	Q13201	1228 aa		11.47	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	LARP6	Q9BRS8	491 aa	Known RBP	11.47	□□□□□ -0.57
ATP6V0A1-222	ENST00000589727	EID1	Q9Y6B2	187 aa		11.45	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	DDX27	Q96GQ7	796 aa	Known RBP	11.44	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.44	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	PREX2	Q70Z35	1606 aa		11.44	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	KIF3B	O15066	747 aa		11.43	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	HRC	P23327	699 aa		11.43	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	CADPS2	Q86UW7	1296 aa		11.43	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	SHPRH	Q149N8	1683 aa		11.43	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	NWD1	Q149M9	1564 aa		11.42	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	PRDM15	P57071	1507 aa	Predicted RBP	11.42	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	SYCP2	Q9BX26	1530 aa		11.42	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	OXER1	Q8TDS5	423 aa		11.42	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	PSD	A5PKW4	1024 aa	Predicted RBP	11.41	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	SPRYD3	Q8NCJ5	442 aa		11.41	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	INO80	Q9ULG1	1556 aa	Predicted RBP	11.41	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	MFSD10	Q14728	455 aa		11.4	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	DEFB132	Q7Z7B7	95 aa		11.4	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	TIAM1	Q13009	1591 aa		11.4	□□□□□ -0.58
ATP6V0A1-222	ENST00000589727	DHX29	Q7Z478	1369 aa	Known RBP	11.4	□□□□□ -0.59
ATP6V0A1-222	ENST00000589727	ABCC3	O15438	1527 aa		11.4	□□□□□ -0.59
ATP6V0A1-222	ENST00000589727	NHSL1	Q5SYE7	1610 aa		11.39	□□□□□ -0.59
ATP6V0A1-222	ENST00000589727	TRPC5	Q9UL62	973 aa	Predicted RBP	11.39	□□□□□ -0.59
ATP6V0A1-222	ENST00000589727	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.38	□□□□□ -0.59
ATP6V0A1-222	ENST00000589727	NCOA2	Q15596	1464 aa		11.38	□□□□□ -0.59

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