RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 MARF1Q9Y4F3 1742 aaKnown RBP10.21□□□□□ -0.77
BECN1-209ENST00000589492 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
BECN1-209ENST00000589492 COL22A1Q8NFW1 1626 aaPredicted RBP10.21□□□□□ -0.78
BECN1-209ENST00000589492 GLI3P10071 1580 aa10.2□□□□□ -0.78
BECN1-209ENST00000589492 HRCP23327 699 aa10.2□□□□□ -0.78
BECN1-209ENST00000589492 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
BECN1-209ENST00000589492 C1orf167Q5SNV9 1468 aa10.2□□□□□ -0.78
BECN1-209ENST00000589492 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
BECN1-209ENST00000589492 ANKRD30AQ9BXX3 1397 aa10.19□□□□□ -0.78
BECN1-209ENST00000589492 MYOM2P54296 1465 aa10.18□□□□□ -0.78
BECN1-209ENST00000589492 SF3B2Q13435 895 aaKnown RBP10.18□□□□□ -0.78
BECN1-209ENST00000589492 ORAI2Q96SN7 254 aa10.18□□□□□ -0.78
BECN1-209ENST00000589492 SPHKAPQ2M3C7 1700 aa10.18□□□□□ -0.78
BECN1-209ENST00000589492 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.18□□□□□ -0.78
BECN1-209ENST00000589492 E9PCH4 1651 aa10.18□□□□□ -0.78
BECN1-209ENST00000589492 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
BECN1-209ENST00000589492 METP08581 1390 aa10.17□□□□□ -0.78
BECN1-209ENST00000589492 YY1P25490 414 aa10.16□□□□□ -0.78
BECN1-209ENST00000589492 CNKSR2Q8WXI2 1034 aa10.16□□□□□ -0.78
BECN1-209ENST00000589492 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
BECN1-209ENST00000589492 ADGRL2O95490 1459 aa10.13□□□□□ -0.79
BECN1-209ENST00000589492 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
BECN1-209ENST00000589492 IQGAP3Q86VI3 1631 aa10.13□□□□□ -0.79
BECN1-209ENST00000589492 ANKRD50Q9ULJ7 1429 aa10.13□□□□□ -0.79
BECN1-209ENST00000589492 SLIT2O94813 1529 aa10.12□□□□□ -0.79
BECN1-209ENST00000589492 R3HDM1Q15032 1099 aaKnown RBP10.12□□□□□ -0.79
BECN1-209ENST00000589492 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
BECN1-209ENST00000589492 PXDNQ92626 1479 aa10.11□□□□□ -0.79
BECN1-209ENST00000589492 BAG6P46379 1132 aa10.11□□□□□ -0.79
BECN1-209ENST00000589492 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
BECN1-209ENST00000589492 USP32Q8NFA0 1604 aa10.09□□□□□ -0.79
BECN1-209ENST00000589492 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
BECN1-209ENST00000589492 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
BECN1-209ENST00000589492 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
BECN1-209ENST00000589492 ROBO2Q9HCK4 1378 aa10.09□□□□□ -0.79
BECN1-209ENST00000589492 NPHP3Q7Z494 1330 aa10.08□□□□□ -0.8
BECN1-209ENST00000589492 ZNF326Q5BKZ1 582 aaKnown RBP10.08□□□□□ -0.8
BECN1-209ENST00000589492 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
BECN1-209ENST00000589492 PLCH1Q4KWH8 1693 aa10.08□□□□□ -0.8
BECN1-209ENST00000589492 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
BECN1-209ENST00000589492 FOXO3O43524 673 aa10.07□□□□□ -0.8
BECN1-209ENST00000589492 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
BECN1-209ENST00000589492 NEXMIFQ5QGS0 1516 aa10.07□□□□□ -0.8
BECN1-209ENST00000589492 VPS72Q15906 364 aa10.06□□□□□ -0.8
BECN1-209ENST00000589492 TNS1Q9HBL0 1735 aaKnown RBP10.05□□□□□ -0.8
BECN1-209ENST00000589492 NWD2Q9ULI1 1742 aa10.05□□□□□ -0.8
BECN1-209ENST00000589492 A0A0G2JS52 829 aa10.05□□□□□ -0.8
BECN1-209ENST00000589492 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
BECN1-209ENST00000589492 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
BECN1-209ENST00000589492 MYT1Q01538 1121 aa10.05□□□□□ -0.8
BECN1-209ENST00000589492 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
BECN1-209ENST00000589492 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
BECN1-209ENST00000589492 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
BECN1-209ENST00000589492 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
BECN1-209ENST00000589492 CDC42BPGQ6DT37 1551 aa10.04□□□□□ -0.8
BECN1-209ENST00000589492 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
BECN1-209ENST00000589492 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
BECN1-209ENST00000589492 ABCA3Q99758 1704 aa10.02□□□□□ -0.8
BECN1-209ENST00000589492 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
BECN1-209ENST00000589492 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
BECN1-209ENST00000589492 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
BECN1-209ENST00000589492 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
BECN1-209ENST00000589492 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
BECN1-209ENST00000589492 CAMTA1Q9Y6Y1 1673 aa10.02□□□□□ -0.81
BECN1-209ENST00000589492 SPATA31A3Q5VYP0 1347 aa10.02□□□□□ -0.81
BECN1-209ENST00000589492 NRAPQ86VF7 1730 aa10.02□□□□□ -0.81
BECN1-209ENST00000589492 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
BECN1-209ENST00000589492 HFM1A2PYH4 1435 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 PRAG1Q86YV5 1406 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 SENP3-EIF4A1A0A087X0R7 540 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
BECN1-209ENST00000589492 NUP155O75694 1391 aa10.01□□□□□ -0.81
BECN1-209ENST00000589492 NAIPQ13075 1403 aa9.99□□□□□ -0.81
BECN1-209ENST00000589492 KIF1BO60333 1816 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 ADGRB2O60241 1585 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 CAMKK2Q96RR4 588 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 PPP1R1BQ9UD71 204 aaPredicted RBP9.98□□□□□ -0.81
BECN1-209ENST00000589492 KIF1AQ12756 1690 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 RREB1Q92766 1687 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 NUP188Q5SRE5 1749 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 TNS3Q68CZ2 1445 aa9.98□□□□□ -0.81
BECN1-209ENST00000589492 FMN2Q9NZ56 1722 aa9.97□□□□□ -0.81
BECN1-209ENST00000589492 KRT28Q7Z3Y7 464 aa9.97□□□□□ -0.81
BECN1-209ENST00000589492 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
BECN1-209ENST00000589492 THSD7AQ9UPZ6 1657 aa9.96□□□□□ -0.81
BECN1-209ENST00000589492 RGPD8O14715 1765 aaPredicted RBP9.96□□□□□ -0.81
BECN1-209ENST00000589492 FAM83GA6ND36 823 aa9.96□□□□□ -0.82
BECN1-209ENST00000589492 TRIM37O94972 964 aa9.96□□□□□ -0.82
BECN1-209ENST00000589492 WAPLQ7Z5K2 1190 aa9.95□□□□□ -0.82
BECN1-209ENST00000589492 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
BECN1-209ENST00000589492 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
BECN1-209ENST00000589492 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
BECN1-209ENST00000589492 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
BECN1-209ENST00000589492 APBA3O96018 575 aa9.94□□□□□ -0.82
BECN1-209ENST00000589492 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
BECN1-209ENST00000589492 SPON1Q9HCB6 807 aa9.94□□□□□ -0.82
BECN1-209ENST00000589492 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms