RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 TECPR2O15040 1411 aa16.36■□□□□ 0.21
ZNF397-206ENST00000589420 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
ZNF397-206ENST00000589420 CDC42BPGQ6DT37 1551 aa16.36■□□□□ 0.21
ZNF397-206ENST00000589420 C8orf37Q96NL8 207 aa16.36■□□□□ 0.21
ZNF397-206ENST00000589420 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
ZNF397-206ENST00000589420 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
ZNF397-206ENST00000589420 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
ZNF397-206ENST00000589420 STK26Q9P289 416 aa16.34■□□□□ 0.21
ZNF397-206ENST00000589420 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
ZNF397-206ENST00000589420 ADAMTS2O95450 1211 aa16.33■□□□□ 0.2
ZNF397-206ENST00000589420 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.2
ZNF397-206ENST00000589420 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
ZNF397-206ENST00000589420 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
ZNF397-206ENST00000589420 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
ZNF397-206ENST00000589420 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
ZNF397-206ENST00000589420 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
ZNF397-206ENST00000589420 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
ZNF397-206ENST00000589420 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
ZNF397-206ENST00000589420 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
ZNF397-206ENST00000589420 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
ZNF397-206ENST00000589420 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
ZNF397-206ENST00000589420 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
ZNF397-206ENST00000589420 PXDNQ92626 1479 aa16.29■□□□□ 0.2
ZNF397-206ENST00000589420 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
ZNF397-206ENST00000589420 FOXO3O43524 673 aa16.28■□□□□ 0.2
ZNF397-206ENST00000589420 NRXN1Q9ULB1 1477 aa16.28■□□□□ 0.2
ZNF397-206ENST00000589420 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.2
ZNF397-206ENST00000589420 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
ZNF397-206ENST00000589420 USP21Q9UK80 565 aa16.27■□□□□ 0.2
ZNF397-206ENST00000589420 MYOM2P54296 1465 aa16.27■□□□□ 0.19
ZNF397-206ENST00000589420 RGS12O14924 1447 aa16.27■□□□□ 0.19
ZNF397-206ENST00000589420 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
ZNF397-206ENST00000589420 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
ZNF397-206ENST00000589420 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
ZNF397-206ENST00000589420 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
ZNF397-206ENST00000589420 XPCQ01831 940 aaPredicted RBP16.24■□□□□ 0.19
ZNF397-206ENST00000589420 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
ZNF397-206ENST00000589420 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
ZNF397-206ENST00000589420 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
ZNF397-206ENST00000589420 SPATA31A3Q5VYP0 1347 aa16.2■□□□□ 0.18
ZNF397-206ENST00000589420 ATRNO75882 1429 aa16.2■□□□□ 0.18
ZNF397-206ENST00000589420 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
ZNF397-206ENST00000589420 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
ZNF397-206ENST00000589420 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
ZNF397-206ENST00000589420 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
ZNF397-206ENST00000589420 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
ZNF397-206ENST00000589420 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
ZNF397-206ENST00000589420 POGKQ9P215 609 aa16.18■□□□□ 0.18
ZNF397-206ENST00000589420 HRCP23327 699 aa16.17■□□□□ 0.18
ZNF397-206ENST00000589420 PSME1Q06323 249 aa16.17■□□□□ 0.18
ZNF397-206ENST00000589420 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
ZNF397-206ENST00000589420 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
ZNF397-206ENST00000589420 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
ZNF397-206ENST00000589420 ADGRB1O14514 1584 aa16.15■□□□□ 0.18
ZNF397-206ENST00000589420 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
ZNF397-206ENST00000589420 ANKARQ7Z5J8 1434 aa16.15■□□□□ 0.18
ZNF397-206ENST00000589420 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
ZNF397-206ENST00000589420 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
ZNF397-206ENST00000589420 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
ZNF397-206ENST00000589420 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
ZNF397-206ENST00000589420 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
ZNF397-206ENST00000589420 SLIT2O94813 1529 aa16.13■□□□□ 0.17
ZNF397-206ENST00000589420 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
ZNF397-206ENST00000589420 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
ZNF397-206ENST00000589420 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
ZNF397-206ENST00000589420 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
ZNF397-206ENST00000589420 ARHGEF10O15013 1369 aa16.12■□□□□ 0.17
ZNF397-206ENST00000589420 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
ZNF397-206ENST00000589420 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
ZNF397-206ENST00000589420 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
ZNF397-206ENST00000589420 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
ZNF397-206ENST00000589420 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
ZNF397-206ENST00000589420 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
ZNF397-206ENST00000589420 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
ZNF397-206ENST00000589420 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
ZNF397-206ENST00000589420 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
ZNF397-206ENST00000589420 RALGAPBQ86X10 1494 aa16.08■□□□□ 0.16
ZNF397-206ENST00000589420 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
ZNF397-206ENST00000589420 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
ZNF397-206ENST00000589420 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
ZNF397-206ENST00000589420 VPS72Q15906 364 aa16.06■□□□□ 0.16
ZNF397-206ENST00000589420 GLI3P10071 1580 aa16.05■□□□□ 0.16
ZNF397-206ENST00000589420 PRR36Q9H6K5 1346 aa16.05■□□□□ 0.16
ZNF397-206ENST00000589420 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
ZNF397-206ENST00000589420 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
ZNF397-206ENST00000589420 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
ZNF397-206ENST00000589420 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
ZNF397-206ENST00000589420 EP400Q96L91 3159 aa16.02■□□□□ 0.16
ZNF397-206ENST00000589420 FAM83GA6ND36 823 aa16.02■□□□□ 0.16
ZNF397-206ENST00000589420 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
ZNF397-206ENST00000589420 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.15
ZNF397-206ENST00000589420 ONECUT3O60422 494 aaPredicted RBP16.01■□□□□ 0.15
ZNF397-206ENST00000589420 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
ZNF397-206ENST00000589420 PLCH1Q4KWH8 1693 aa16.01■□□□□ 0.15
ZNF397-206ENST00000589420 ALS2Q96Q42 1657 aa16■□□□□ 0.15
ZNF397-206ENST00000589420 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
ZNF397-206ENST00000589420 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
ZNF397-206ENST00000589420 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
ZNF397-206ENST00000589420 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
ZNF397-206ENST00000589420 ATP7BP35670 1465 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms