RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 PLA2G2CQ5R387 149 aa6.23□□□□□ -1.41
ZNF540-207ENST00000589285 DDRGK1Q96HY6 314 aa6.23□□□□□ -1.41
ZNF540-207ENST00000589285 PLA2G2EQ9NZK7 142 aa6.23□□□□□ -1.41
ZNF540-207ENST00000589285 KMT5BQ4FZB7 885 aa6.23□□□□□ -1.41
ZNF540-207ENST00000589285 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-207ENST00000589285 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-207ENST00000589285 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-207ENST00000589285 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-207ENST00000589285 HMX1Q9NP08 348 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-207ENST00000589285 ABCC9O60706 1549 aa6.22□□□□□ -1.41
ZNF540-207ENST00000589285 THAP11Q96EK4 314 aa6.22□□□□□ -1.41
ZNF540-207ENST00000589285 CTDSPL2Q05D32 466 aa6.21□□□□□ -1.41
ZNF540-207ENST00000589285 LRRN4Q8WUT4 740 aa6.21□□□□□ -1.41
ZNF540-207ENST00000589285 SPSB2Q99619 263 aa6.21□□□□□ -1.41
ZNF540-207ENST00000589285 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.21□□□□□ -1.41
ZNF540-207ENST00000589285 NACADO15069 1562 aa6.21□□□□□ -1.42
ZNF540-207ENST00000589285 SLC4A3P48751 1232 aa6.21□□□□□ -1.42
ZNF540-207ENST00000589285 PPP1R18Q6NYC8 613 aa6.2□□□□□ -1.42
ZNF540-207ENST00000589285 MAP10Q9P2G4 905 aa6.19□□□□□ -1.42
ZNF540-207ENST00000589285 BRICD5Q6PL45 260 aa6.19□□□□□ -1.42
ZNF540-207ENST00000589285 PRR7Q8TB68 274 aa6.19□□□□□ -1.42
ZNF540-207ENST00000589285 SNRKQ9NRH2 765 aa6.19□□□□□ -1.42
ZNF540-207ENST00000589285 AP1G2O75843 785 aa6.19□□□□□ -1.42
ZNF540-207ENST00000589285 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 SPTLC1O15269 473 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 CCDC24Q8N4L8 307 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 FCF1Q9Y324 198 aaKnown RBP6.18□□□□□ -1.42
ZNF540-207ENST00000589285 RNF223E7ERA6 249 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 MTMR2Q13614 643 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 SKIV2LQ15477 1246 aaKnown RBP6.18□□□□□ -1.42
ZNF540-207ENST00000589285 SH3D19Q5HYK7 790 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 RSPH4AQ5TD94 716 aa6.18□□□□□ -1.42
ZNF540-207ENST00000589285 KCNC4Q03721 635 aa6.17□□□□□ -1.42
ZNF540-207ENST00000589285 RB1CC1Q8TDY2 1594 aa6.17□□□□□ -1.42
ZNF540-207ENST00000589285 EMID1Q96A84 441 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-207ENST00000589285 RFC5P40937 340 aa6.16□□□□□ -1.42
ZNF540-207ENST00000589285 PTCRAQ6ISU1 281 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-207ENST00000589285 USB1Q9BQ65 265 aaKnown RBP6.16□□□□□ -1.42
ZNF540-207ENST00000589285 LILRB3O75022 631 aa6.16□□□□□ -1.42
ZNF540-207ENST00000589285 IL21Q9HBE4 155 aa6.16□□□□□ -1.42
ZNF540-207ENST00000589285 POM121Q96HA1 1249 aa6.15□□□□□ -1.43
ZNF540-207ENST00000589285 NR1I2O75469 434 aa6.14□□□□□ -1.43
ZNF540-207ENST00000589285 PCMTD1Q96MG8 357 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-207ENST00000589285 SLC6A16Q9GZN6 736 aa6.14□□□□□ -1.43
ZNF540-207ENST00000589285 FMNL1O95466 1100 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-207ENST00000589285 ITGBL1O95965 494 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-207ENST00000589285 NR6A1Q15406 480 aa6.13□□□□□ -1.43
ZNF540-207ENST00000589285 LINC01559Q495D7 138 aa6.13□□□□□ -1.43
ZNF540-207ENST00000589285 ZBTB3Q9H5J0 574 aa6.13□□□□□ -1.43
ZNF540-207ENST00000589285 ADH1BP00325 375 aa6.13□□□□□ -1.43
ZNF540-207ENST00000589285 RSPH6AQ9H0K4 717 aa6.13□□□□□ -1.43
ZNF540-207ENST00000589285 RETREG3Q86VR2 466 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 CTHP32929 405 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 USP46P62068 366 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 USP17L8P0C7I0 530 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 TMEM132AQ24JP5 1023 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 GRIPAP1Q4V328 841 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 MTMR14Q8NCE2 650 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 CLUAP1Q96AJ1 413 aa6.12□□□□□ -1.43
ZNF540-207ENST00000589285 NUDT12Q9BQG2 462 aa6.1□□□□□ -1.43
ZNF540-207ENST00000589285 LIAT1Q6ZQX7 453 aa6.1□□□□□ -1.43
ZNF540-207ENST00000589285 PRR14Q9BWN1 585 aa6.1□□□□□ -1.43
ZNF540-207ENST00000589285 NYAP1Q6ZVC0 841 aa6.1□□□□□ -1.43
ZNF540-207ENST00000589285 TBC1D2BQ9UPU7 963 aa6.1□□□□□ -1.43
ZNF540-207ENST00000589285 GDPD2Q9HCC8 539 aa6.09□□□□□ -1.43
ZNF540-207ENST00000589285 TNFRSF10AO00220 468 aa6.09□□□□□ -1.43
ZNF540-207ENST00000589285 GPR37L1O60883 481 aa6.09□□□□□ -1.43
ZNF540-207ENST00000589285 TRIM34Q9BYJ4 488 aa6.09□□□□□ -1.43
ZNF540-207ENST00000589285 PRKD2Q9BZL6 878 aa6.08□□□□□ -1.44
ZNF540-207ENST00000589285 DXOO77932 396 aaKnown RBP6.08□□□□□ -1.44
ZNF540-207ENST00000589285 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.08□□□□□ -1.44
ZNF540-207ENST00000589285 GTF3C3Q9Y5Q9 886 aa6.08□□□□□ -1.44
ZNF540-207ENST00000589285 CARD14Q9BXL6 1004 aa6.07□□□□□ -1.44
ZNF540-207ENST00000589285 MCM6Q14566 821 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 DIXDC1Q155Q3 683 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 Q3C1V9 767 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 MAGEB6P1A0A0J9YX57 407 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 JUNDP17535 347 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 FOXC1Q12948 553 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 PPP2R2DQ66LE6 453 aa6.06□□□□□ -1.44
ZNF540-207ENST00000589285 GJD4Q96KN9 370 aaPredicted RBP6.06□□□□□ -1.44
ZNF540-207ENST00000589285 SKOR1P84550 965 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 HELBQ8NG08 1087 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-207ENST00000589285 BAP1Q92560 729 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 MMP16P51512 607 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 UNC93B1Q9H1C4 597 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 TIMELESSQ9UNS1 1208 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 NECTIN2Q92692 538 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 FOXJ1Q92949 421 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 GOPCQ9HD26 462 aa6.05□□□□□ -1.44
ZNF540-207ENST00000589285 CCNYL3P0C7X3 344 aa6.04□□□□□ -1.44
ZNF540-207ENST00000589285 PRPF38BQ5VTL8 546 aaKnown RBP6.04□□□□□ -1.44
ZNF540-207ENST00000589285 LYPD8Q6UX82 237 aa6.04□□□□□ -1.44
ZNF540-207ENST00000589285 SALL2Q9Y467 1007 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-207ENST00000589285 A0A0G2JS52 829 aa6.04□□□□□ -1.44
ZNF540-207ENST00000589285 ARID3CA6NKF2 412 aa6.04□□□□□ -1.44
ZNF540-207ENST00000589285 TRIM32Q13049 653 aa6.04□□□□□ -1.44
ZNF540-207ENST00000589285 ABL2P42684 1182 aa6.03□□□□□ -1.44
ZNF540-207ENST00000589285 UNC13AQ9UPW8 1703 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 377.6 ms