RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
NFIC-206ENST00000589123 FOXD1Q16676 465 aa16.78■□□□□ 0.28
NFIC-206ENST00000589123 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
NFIC-206ENST00000589123 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
NFIC-206ENST00000589123 ATP2B1P20020 1258 aa16.77■□□□□ 0.28
NFIC-206ENST00000589123 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
NFIC-206ENST00000589123 FAM177BA6PVY3 158 aa16.77■□□□□ 0.27
NFIC-206ENST00000589123 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
NFIC-206ENST00000589123 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
NFIC-206ENST00000589123 CHMP5Q9NZZ3 219 aa16.75■□□□□ 0.27
NFIC-206ENST00000589123 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
NFIC-206ENST00000589123 GBP2P32456 591 aaPredicted RBP16.75■□□□□ 0.27
NFIC-206ENST00000589123 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
NFIC-206ENST00000589123 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
NFIC-206ENST00000589123 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
NFIC-206ENST00000589123 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
NFIC-206ENST00000589123 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
NFIC-206ENST00000589123 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
NFIC-206ENST00000589123 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
NFIC-206ENST00000589123 CFAP57Q96MR6 1250 aa16.73■□□□□ 0.27
NFIC-206ENST00000589123 TICAM2Q86XR7 235 aa16.73■□□□□ 0.27
NFIC-206ENST00000589123 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
NFIC-206ENST00000589123 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
NFIC-206ENST00000589123 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
NFIC-206ENST00000589123 PSMD1Q99460 953 aa16.72■□□□□ 0.27
NFIC-206ENST00000589123 REC8O95072 547 aa16.72■□□□□ 0.27
NFIC-206ENST00000589123 PSME1Q06323 249 aa16.72■□□□□ 0.27
NFIC-206ENST00000589123 PKD2Q13563 968 aa16.71■□□□□ 0.27
NFIC-206ENST00000589123 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
NFIC-206ENST00000589123 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
NFIC-206ENST00000589123 GON4LQ3T8J9 2241 aa16.71■□□□□ 0.27
NFIC-206ENST00000589123 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.26
NFIC-206ENST00000589123 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 SMC2O95347 1197 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 FMNL2Q96PY5 1086 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 GRIPAP1Q4V328 841 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 COG3Q96JB2 828 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 CLGNO14967 610 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 FILIP1LQ4L180 1135 aa16.7■□□□□ 0.26
NFIC-206ENST00000589123 TXLNAP40222 546 aa16.69■□□□□ 0.26
NFIC-206ENST00000589123 SSR1P43307 286 aaKnown RBP16.69■□□□□ 0.26
NFIC-206ENST00000589123 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
NFIC-206ENST00000589123 DESP17661 470 aa16.69■□□□□ 0.26
NFIC-206ENST00000589123 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
NFIC-206ENST00000589123 CCDC181Q5TID7 509 aa16.69■□□□□ 0.26
NFIC-206ENST00000589123 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
NFIC-206ENST00000589123 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
NFIC-206ENST00000589123 TANGO6Q9C0B7 1094 aa16.68■□□□□ 0.26
NFIC-206ENST00000589123 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
NFIC-206ENST00000589123 CCDC175P0C221 793 aa16.68■□□□□ 0.26
NFIC-206ENST00000589123 SART3Q15020 963 aaKnown RBP16.67■□□□□ 0.26
NFIC-206ENST00000589123 WASHC2AQ641Q2 1341 aa16.67■□□□□ 0.26
NFIC-206ENST00000589123 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
NFIC-206ENST00000589123 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
NFIC-206ENST00000589123 FKBP5Q13451 457 aaPredicted RBP16.66■□□□□ 0.26
NFIC-206ENST00000589123 ANAPC15P60006 121 aa16.66■□□□□ 0.26
NFIC-206ENST00000589123 IPO4Q8TEX9 1081 aaKnown RBP16.65■□□□□ 0.26
NFIC-206ENST00000589123 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
NFIC-206ENST00000589123 ZNHIT6Q9NWK9 470 aaKnown RBP16.65■□□□□ 0.26
NFIC-206ENST00000589123 WASHC2CQ9Y4E1 1318 aa16.65■□□□□ 0.26
NFIC-206ENST00000589123 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
NFIC-206ENST00000589123 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
NFIC-206ENST00000589123 KIF3BO15066 747 aa16.65■□□□□ 0.26
NFIC-206ENST00000589123 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
NFIC-206ENST00000589123 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
NFIC-206ENST00000589123 TNNT1P13805 278 aa16.64■□□□□ 0.25
NFIC-206ENST00000589123 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
NFIC-206ENST00000589123 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
NFIC-206ENST00000589123 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
NFIC-206ENST00000589123 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
NFIC-206ENST00000589123 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
NFIC-206ENST00000589123 FAM193AP78312 1265 aa16.63■□□□□ 0.25
NFIC-206ENST00000589123 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
NFIC-206ENST00000589123 TRIM5Q9C035 493 aa16.62■□□□□ 0.25
NFIC-206ENST00000589123 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
NFIC-206ENST00000589123 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
NFIC-206ENST00000589123 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
NFIC-206ENST00000589123 ERC2O15083 957 aa16.61■□□□□ 0.25
NFIC-206ENST00000589123 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
NFIC-206ENST00000589123 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
NFIC-206ENST00000589123 SLC26A8Q96RN1 970 aa16.61■□□□□ 0.25
NFIC-206ENST00000589123 LUC7LQ9NQ29 371 aaKnown RBP16.6■□□□□ 0.25
NFIC-206ENST00000589123 RABEP1Q15276 862 aa16.6■□□□□ 0.25
NFIC-206ENST00000589123 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
NFIC-206ENST00000589123 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
NFIC-206ENST00000589123 CCP110O43303 1012 aa16.59■□□□□ 0.25
NFIC-206ENST00000589123 STAMBPO95630 424 aa16.59■□□□□ 0.25
NFIC-206ENST00000589123 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
NFIC-206ENST00000589123 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
NFIC-206ENST00000589123 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
NFIC-206ENST00000589123 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
NFIC-206ENST00000589123 CCDC91Q7Z6B0 441 aa16.58■□□□□ 0.25
NFIC-206ENST00000589123 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
NFIC-206ENST00000589123 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
NFIC-206ENST00000589123 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
NFIC-206ENST00000589123 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
NFIC-206ENST00000589123 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
NFIC-206ENST00000589123 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
NFIC-206ENST00000589123 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
NFIC-206ENST00000589123 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms