RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 ASXL2Q76L83 1435 aa17.73■□□□□ 0.43
KDM4B-208ENST00000589104 FBLN2P98095 1184 aa17.72■□□□□ 0.43
KDM4B-208ENST00000589104 CENPQQ7L2Z9 268 aaPredicted RBP17.72■□□□□ 0.43
KDM4B-208ENST00000589104 PTPRMP28827 1452 aa17.72■□□□□ 0.43
KDM4B-208ENST00000589104 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
KDM4B-208ENST00000589104 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
KDM4B-208ENST00000589104 ANP32AP39687 249 aaKnown RBP17.69■□□□□ 0.42
KDM4B-208ENST00000589104 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
KDM4B-208ENST00000589104 CDCA8Q53HL2 280 aa17.68■□□□□ 0.42
KDM4B-208ENST00000589104 NEO1Q92859 1461 aa17.68■□□□□ 0.42
KDM4B-208ENST00000589104 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
KDM4B-208ENST00000589104 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
KDM4B-208ENST00000589104 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
KDM4B-208ENST00000589104 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
KDM4B-208ENST00000589104 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
KDM4B-208ENST00000589104 NSD2O96028 1365 aa17.66■□□□□ 0.42
KDM4B-208ENST00000589104 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
KDM4B-208ENST00000589104 DLC1Q96QB1 1528 aa17.66■□□□□ 0.42
KDM4B-208ENST00000589104 PLIN1O60240 522 aa17.66■□□□□ 0.42
KDM4B-208ENST00000589104 MON2Q7Z3U7 1717 aa17.65■□□□□ 0.42
KDM4B-208ENST00000589104 RGL3Q3MIN7 710 aa17.65■□□□□ 0.42
KDM4B-208ENST00000589104 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
KDM4B-208ENST00000589104 AFAP1Q8N556 730 aa17.64■□□□□ 0.41
KDM4B-208ENST00000589104 NRKQ7Z2Y5 1582 aa17.64■□□□□ 0.41
KDM4B-208ENST00000589104 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
KDM4B-208ENST00000589104 C14orf93Q9H972 538 aaKnown RBP17.63■□□□□ 0.41
KDM4B-208ENST00000589104 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
KDM4B-208ENST00000589104 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
KDM4B-208ENST00000589104 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
KDM4B-208ENST00000589104 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
KDM4B-208ENST00000589104 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
KDM4B-208ENST00000589104 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
KDM4B-208ENST00000589104 PPIP5K1Q6PFW1 1433 aa17.6■□□□□ 0.41
KDM4B-208ENST00000589104 AAMPQ13685 434 aa17.59■□□□□ 0.41
KDM4B-208ENST00000589104 TOPAZ1Q8N9V7 1692 aa17.59■□□□□ 0.41
KDM4B-208ENST00000589104 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
KDM4B-208ENST00000589104 NALCNQ8IZF0 1738 aa17.59■□□□□ 0.41
KDM4B-208ENST00000589104 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
KDM4B-208ENST00000589104 E9PSI1 815 aa17.59■□□□□ 0.41
KDM4B-208ENST00000589104 ANKRD36BQ8N2N9 1353 aa17.58■□□□□ 0.41
KDM4B-208ENST00000589104 NSD3Q9BZ95 1437 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 SKAP1Q86WV1 359 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 YEATS2Q9ULM3 1422 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 C3P01024 1663 aa17.58■□□□□ 0.4
KDM4B-208ENST00000589104 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
KDM4B-208ENST00000589104 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
KDM4B-208ENST00000589104 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
KDM4B-208ENST00000589104 SPATA31D1Q6ZQQ2 1576 aa17.55■□□□□ 0.4
KDM4B-208ENST00000589104 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
KDM4B-208ENST00000589104 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
KDM4B-208ENST00000589104 NCOA3Q9Y6Q9 1424 aa17.54■□□□□ 0.4
KDM4B-208ENST00000589104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.44e-6■■□□□ 12.2
KDM4B-208ENST00000589104 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
KDM4B-208ENST00000589104 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
KDM4B-208ENST00000589104 AGLP35573 1532 aa17.54■□□□□ 0.4
KDM4B-208ENST00000589104 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
KDM4B-208ENST00000589104 IGHDP01880 384 aa17.53■□□□□ 0.4
KDM4B-208ENST00000589104 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
KDM4B-208ENST00000589104 SENP3-EIF4A1A0A087X0R7 540 aa17.53■□□□□ 0.4
KDM4B-208ENST00000589104 PKNOX2Q96KN3 472 aa17.52■□□□□ 0.4
KDM4B-208ENST00000589104 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.39
KDM4B-208ENST00000589104 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
KDM4B-208ENST00000589104 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
KDM4B-208ENST00000589104 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
KDM4B-208ENST00000589104 CGNL1Q0VF96 1302 aa17.5■□□□□ 0.39
KDM4B-208ENST00000589104 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
KDM4B-208ENST00000589104 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
KDM4B-208ENST00000589104 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
KDM4B-208ENST00000589104 BCAR3O75815 825 aa17.48■□□□□ 0.39
KDM4B-208ENST00000589104 PIK3R4Q99570 1358 aa17.47■□□□□ 0.39
KDM4B-208ENST00000589104 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
KDM4B-208ENST00000589104 APAF1O14727 1248 aa17.46■□□□□ 0.39
KDM4B-208ENST00000589104 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.384e-6■■□□□ 14
KDM4B-208ENST00000589104 CPS1P31327 1500 aa17.45■□□□□ 0.38
KDM4B-208ENST00000589104 ATP7BP35670 1465 aa17.44■□□□□ 0.38
KDM4B-208ENST00000589104 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
KDM4B-208ENST00000589104 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
KDM4B-208ENST00000589104 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
KDM4B-208ENST00000589104 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
KDM4B-208ENST00000589104 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
KDM4B-208ENST00000589104 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
KDM4B-208ENST00000589104 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
KDM4B-208ENST00000589104 NFKBIBQ15653 356 aa17.43■□□□□ 0.38
KDM4B-208ENST00000589104 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
KDM4B-208ENST00000589104 DDIT3P35638 169 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
KDM4B-208ENST00000589104 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
KDM4B-208ENST00000589104 IL16Q14005 1332 aa17.41■□□□□ 0.38
KDM4B-208ENST00000589104 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
KDM4B-208ENST00000589104 KIF3BO15066 747 aa17.4■□□□□ 0.38
KDM4B-208ENST00000589104 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
KDM4B-208ENST00000589104 RLBP1P12271 317 aa17.4■□□□□ 0.38
KDM4B-208ENST00000589104 SEC24BO95487 1268 aa17.38■□□□□ 0.37
KDM4B-208ENST00000589104 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms