RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 NEXMIFQ5QGS0 1516 aa14.07□□□□□ -0.16
APOC1-204ENST00000589078 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
APOC1-204ENST00000589078 METP08581 1390 aa14.07□□□□□ -0.16
APOC1-204ENST00000589078 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
APOC1-204ENST00000589078 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
APOC1-204ENST00000589078 STAC3Q96MF2 364 aa14.04□□□□□ -0.16
APOC1-204ENST00000589078 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
APOC1-204ENST00000589078 USP21Q9UK80 565 aa14.03□□□□□ -0.16
APOC1-204ENST00000589078 ATRNO75882 1429 aa14.03□□□□□ -0.16
APOC1-204ENST00000589078 PTCH1Q13635 1447 aa14.03□□□□□ -0.16
APOC1-204ENST00000589078 MARF1Q9Y4F3 1742 aaKnown RBP14.03□□□□□ -0.16
APOC1-204ENST00000589078 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.17
APOC1-204ENST00000589078 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
APOC1-204ENST00000589078 PCGF6Q9BYE7 350 aa14.01□□□□□ -0.17
APOC1-204ENST00000589078 DHX57Q6P158 1386 aaKnown RBP13.99□□□□□ -0.17
APOC1-204ENST00000589078 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
APOC1-204ENST00000589078 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
APOC1-204ENST00000589078 DCAF11Q8TEB1 546 aa13.99□□□□□ -0.17
APOC1-204ENST00000589078 MYOM2P54296 1465 aa13.99□□□□□ -0.17
APOC1-204ENST00000589078 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
APOC1-204ENST00000589078 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
APOC1-204ENST00000589078 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
APOC1-204ENST00000589078 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
APOC1-204ENST00000589078 PPLO60437 1756 aa13.96□□□□□ -0.17
APOC1-204ENST00000589078 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
APOC1-204ENST00000589078 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.18
APOC1-204ENST00000589078 NEUROD1Q13562 356 aa13.95□□□□□ -0.18
APOC1-204ENST00000589078 CCDC125Q86Z20 511 aa13.95□□□□□ -0.18
APOC1-204ENST00000589078 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
APOC1-204ENST00000589078 PXDNQ92626 1479 aa13.94□□□□□ -0.18
APOC1-204ENST00000589078 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
APOC1-204ENST00000589078 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
APOC1-204ENST00000589078 LRP5O75197 1615 aa13.93□□□□□ -0.18
APOC1-204ENST00000589078 GLI3P10071 1580 aa13.93□□□□□ -0.18
APOC1-204ENST00000589078 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
APOC1-204ENST00000589078 PRAG1Q86YV5 1406 aa13.93□□□□□ -0.18
APOC1-204ENST00000589078 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
APOC1-204ENST00000589078 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
APOC1-204ENST00000589078 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
APOC1-204ENST00000589078 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
APOC1-204ENST00000589078 STK26Q9P289 416 aa13.91□□□□□ -0.18
APOC1-204ENST00000589078 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
APOC1-204ENST00000589078 TMEM132EQ6IEE7 984 aa13.9□□□□□ -0.18
APOC1-204ENST00000589078 GJD4Q96KN9 370 aaPredicted RBP13.9□□□□□ -0.18
APOC1-204ENST00000589078 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
APOC1-204ENST00000589078 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.19
APOC1-204ENST00000589078 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
APOC1-204ENST00000589078 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
APOC1-204ENST00000589078 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
APOC1-204ENST00000589078 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
APOC1-204ENST00000589078 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
APOC1-204ENST00000589078 TECPR2O15040 1411 aa13.88□□□□□ -0.19
APOC1-204ENST00000589078 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
APOC1-204ENST00000589078 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
APOC1-204ENST00000589078 SLIT2O94813 1529 aa13.87□□□□□ -0.19
APOC1-204ENST00000589078 DEFB132Q7Z7B7 95 aa13.87□□□□□ -0.19
APOC1-204ENST00000589078 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
APOC1-204ENST00000589078 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
APOC1-204ENST00000589078 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
APOC1-204ENST00000589078 FOXO3O43524 673 aa13.85□□□□□ -0.19
APOC1-204ENST00000589078 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
APOC1-204ENST00000589078 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
APOC1-204ENST00000589078 POGKQ9P215 609 aa13.84□□□□□ -0.19
APOC1-204ENST00000589078 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
APOC1-204ENST00000589078 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
APOC1-204ENST00000589078 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
APOC1-204ENST00000589078 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
APOC1-204ENST00000589078 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
APOC1-204ENST00000589078 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
APOC1-204ENST00000589078 PRAM1Q96QH2 718 aa13.82□□□□□ -0.2
APOC1-204ENST00000589078 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
APOC1-204ENST00000589078 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
APOC1-204ENST00000589078 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
APOC1-204ENST00000589078 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
APOC1-204ENST00000589078 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
APOC1-204ENST00000589078 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
APOC1-204ENST00000589078 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
APOC1-204ENST00000589078 SPATA31A3Q5VYP0 1347 aa13.79□□□□□ -0.2
APOC1-204ENST00000589078 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
APOC1-204ENST00000589078 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
APOC1-204ENST00000589078 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
APOC1-204ENST00000589078 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
APOC1-204ENST00000589078 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
APOC1-204ENST00000589078 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.21
APOC1-204ENST00000589078 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
APOC1-204ENST00000589078 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
APOC1-204ENST00000589078 NRAPQ86VF7 1730 aa13.77□□□□□ -0.21
APOC1-204ENST00000589078 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
APOC1-204ENST00000589078 VPS72Q15906 364 aa13.76□□□□□ -0.21
APOC1-204ENST00000589078 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
APOC1-204ENST00000589078 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
APOC1-204ENST00000589078 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
APOC1-204ENST00000589078 EIF3AQ14152 1382 aaKnown RBP13.75□□□□□ -0.21
APOC1-204ENST00000589078 TNS1Q9HBL0 1735 aaKnown RBP13.74□□□□□ -0.21
APOC1-204ENST00000589078 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
APOC1-204ENST00000589078 BAG6P46379 1132 aa13.74□□□□□ -0.21
APOC1-204ENST00000589078 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
APOC1-204ENST00000589078 MINK1Q8N4C8 1332 aaPredicted RBP13.73□□□□□ -0.21
APOC1-204ENST00000589078 A0A0G2JS52 829 aa13.73□□□□□ -0.21
APOC1-204ENST00000589078 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms