RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 IFT172Q9UG01 1749 aa31.78■■■□□ 2.68
NEDD4L-225ENST00000589054 PIK3C2GO75747 1445 aa31.77■■■□□ 2.68
NEDD4L-225ENST00000589054 C8orf37Q96NL8 207 aa31.77■■■□□ 2.68
NEDD4L-225ENST00000589054 TECPR2O15040 1411 aa31.76■■■□□ 2.68
NEDD4L-225ENST00000589054 RXRBP28702 533 aa31.75■■■□□ 2.67
NEDD4L-225ENST00000589054 ABCC11Q96J66 1382 aa31.75■■■□□ 2.67
NEDD4L-225ENST00000589054 NUTM2FA1L443 756 aa31.73■■■□□ 2.67
NEDD4L-225ENST00000589054 ADAMTS2O95450 1211 aa31.73■■■□□ 2.67
NEDD4L-225ENST00000589054 ESCO1Q5FWF5 840 aa31.73■■■□□ 2.67
NEDD4L-225ENST00000589054 RAB3GAP2Q9H2M9 1393 aa31.72■■■□□ 2.67
NEDD4L-225ENST00000589054 CDC42BPGQ6DT37 1551 aa31.71■■■□□ 2.67
NEDD4L-225ENST00000589054 UPF1Q92900 1129 aaKnown RBP eCLIP31.7■■■□□ 2.674e-8■■■□□ 15.3
NEDD4L-225ENST00000589054 C14orf93Q9H972 538 aaKnown RBP31.7■■■□□ 2.67
NEDD4L-225ENST00000589054 XPCQ01831 940 aaPredicted RBP31.69■■■□□ 2.66
NEDD4L-225ENST00000589054 YTHDC2Q9H6S0 1430 aaKnown RBP31.68■■■□□ 2.66
NEDD4L-225ENST00000589054 FOXO3O43524 673 aa31.68■■■□□ 2.66
NEDD4L-225ENST00000589054 CFAP70Q5T0N1 1121 aa31.68■■■□□ 2.66
NEDD4L-225ENST00000589054 QTRT2Q9H974 415 aaKnown RBP31.68■■■□□ 2.66
NEDD4L-225ENST00000589054 NRXN1Q9ULB1 1477 aa31.66■■■□□ 2.66
NEDD4L-225ENST00000589054 PXDNQ92626 1479 aa31.65■■■□□ 2.66
NEDD4L-225ENST00000589054 NGLY1Q96IV0 654 aa31.65■■■□□ 2.66
NEDD4L-225ENST00000589054 NPHP3Q7Z494 1330 aa31.62■■■□□ 2.65
NEDD4L-225ENST00000589054 CDK12Q9NYV4 1490 aaPredicted RBP31.62■■■□□ 2.65
NEDD4L-225ENST00000589054 KNDC1Q76NI1 1749 aa31.61■■■□□ 2.65
NEDD4L-225ENST00000589054 SIRT1Q96EB6 747 aa31.6■■■□□ 2.65
NEDD4L-225ENST00000589054 RGS12O14924 1447 aa31.59■■■□□ 2.65
NEDD4L-225ENST00000589054 RBM6P78332 1123 aaKnown RBP31.59■■■□□ 2.65
NEDD4L-225ENST00000589054 MYOM2P54296 1465 aa31.59■■■□□ 2.65
NEDD4L-225ENST00000589054 ACIN1Q9UKV3 1341 aaKnown RBP31.58■■■□□ 2.65
NEDD4L-225ENST00000589054 FNBP4Q8N3X1 1017 aaPredicted RBP31.57■■■□□ 2.64
NEDD4L-225ENST00000589054 COL22A1Q8NFW1 1626 aaPredicted RBP31.57■■■□□ 2.64
NEDD4L-225ENST00000589054 USP21Q9UK80 565 aa31.55■■■□□ 2.64
NEDD4L-225ENST00000589054 SAFB2Q14151 953 aaKnown RBP eCLIP31.54■■■□□ 2.64
NEDD4L-225ENST00000589054 FMN2Q9NZ56 1722 aa31.53■■■□□ 2.64
NEDD4L-225ENST00000589054 DHX57Q6P158 1386 aaKnown RBP31.53■■■□□ 2.64
NEDD4L-225ENST00000589054 PRAM1Q96QH2 718 aa31.52■■■□□ 2.64
NEDD4L-225ENST00000589054 SPATA31A3Q5VYP0 1347 aa31.49■■■□□ 2.63
NEDD4L-225ENST00000589054 BCL9LQ86UU0 1499 aa31.47■■■□□ 2.63
NEDD4L-225ENST00000589054 KRT28Q7Z3Y7 464 aa31.47■■■□□ 2.63
NEDD4L-225ENST00000589054 TRPC5Q9UL62 973 aaPredicted RBP31.46■■■□□ 2.63
NEDD4L-225ENST00000589054 KDM2AQ9Y2K7 1162 aa31.46■■■□□ 2.63
NEDD4L-225ENST00000589054 ATRNO75882 1429 aa31.46■■■□□ 2.63
NEDD4L-225ENST00000589054 ADGRB1O14514 1584 aa31.46■■■□□ 2.63
NEDD4L-225ENST00000589054 PHF8Q9UPP1 1060 aa31.45■■■□□ 2.63
NEDD4L-225ENST00000589054 DCAF11Q8TEB1 546 aa31.42■■■□□ 2.62
NEDD4L-225ENST00000589054 TRAK1Q9UPV9 953 aa31.42■■■□□ 2.62
NEDD4L-225ENST00000589054 RGPD8O14715 1765 aaPredicted RBP31.41■■■□□ 2.62
NEDD4L-225ENST00000589054 DLC1Q96QB1 1528 aa31.4■■■□□ 2.62
NEDD4L-225ENST00000589054 HRCP23327 699 aa31.4■■■□□ 2.62
NEDD4L-225ENST00000589054 POGKQ9P215 609 aa31.4■■■□□ 2.62
NEDD4L-225ENST00000589054 CABLES1Q8TDN4 633 aa31.38■■■□□ 2.61
NEDD4L-225ENST00000589054 HIRIP3Q9BW71 556 aaPredicted RBP31.38■■■□□ 2.61
NEDD4L-225ENST00000589054 KIF1AQ12756 1690 aa31.38■■■□□ 2.61
NEDD4L-225ENST00000589054 PMFBP1Q8TBY8 1022 aa31.36■■■□□ 2.61
NEDD4L-225ENST00000589054 USP32Q8NFA0 1604 aa31.35■■■□□ 2.61
NEDD4L-225ENST00000589054 PRR36Q9H6K5 1346 aa31.35■■■□□ 2.61
NEDD4L-225ENST00000589054 MINK1Q8N4C8 1332 aaPredicted RBP31.34■■■□□ 2.61
NEDD4L-225ENST00000589054 PLEKHG5O94827 1062 aa31.34■■■□□ 2.61
NEDD4L-225ENST00000589054 TNS3Q68CZ2 1445 aa31.32■■■□□ 2.61
NEDD4L-225ENST00000589054 MARF1Q9Y4F3 1742 aaKnown RBP31.32■■■□□ 2.61
NEDD4L-225ENST00000589054 GJD4Q96KN9 370 aaPredicted RBP31.32■■■□□ 2.6
NEDD4L-225ENST00000589054 SLIT2O94813 1529 aa31.32■■■□□ 2.6
NEDD4L-225ENST00000589054 SBNO1A3KN83 1393 aa31.3■■■□□ 2.6
NEDD4L-225ENST00000589054 PSME1Q06323 249 aa31.29■■■□□ 2.6
NEDD4L-225ENST00000589054 UNC5CLQ8IV45 518 aa31.29■■■□□ 2.6
NEDD4L-225ENST00000589054 ANKARQ7Z5J8 1434 aa31.29■■■□□ 2.6
NEDD4L-225ENST00000589054 ADGRB2O60241 1585 aa31.29■■■□□ 2.6
NEDD4L-225ENST00000589054 LMOD2Q6P5Q4 547 aa31.26■■■□□ 2.59
NEDD4L-225ENST00000589054 ATAD2Q6PL18 1390 aa31.26■■■□□ 2.59
NEDD4L-225ENST00000589054 WASLO00401 505 aaPredicted RBP31.25■■■□□ 2.59
NEDD4L-225ENST00000589054 GLI3P10071 1580 aa31.23■■■□□ 2.59
NEDD4L-225ENST00000589054 RALGAPBQ86X10 1494 aa31.23■■■□□ 2.59
NEDD4L-225ENST00000589054 STAC3Q96MF2 364 aa31.23■■■□□ 2.59
NEDD4L-225ENST00000589054 EP400Q96L91 3159 aa31.2■■■□□ 2.59
NEDD4L-225ENST00000589054 FAM83GA6ND36 823 aa31.2■■■□□ 2.59
NEDD4L-225ENST00000589054 TULP4Q9NRJ4 1543 aa31.19■■■□□ 2.58
NEDD4L-225ENST00000589054 ARHGEF10O15013 1369 aa31.18■■■□□ 2.58
NEDD4L-225ENST00000589054 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.18■■■□□ 2.58
NEDD4L-225ENST00000589054 HAP1P54257 671 aaPredicted RBP31.18■■■□□ 2.58
NEDD4L-225ENST00000589054 TRPM3Q9HCF6 1732 aaPredicted RBP31.17■■■□□ 2.58
NEDD4L-225ENST00000589054 ABCA3Q99758 1704 aa31.15■■■□□ 2.58
NEDD4L-225ENST00000589054 NBPF1Q3BBV0 1214 aa31.15■■■□□ 2.58
NEDD4L-225ENST00000589054 VPS72Q15906 364 aa31.14■■■□□ 2.58
NEDD4L-225ENST00000589054 NUDT16Q96DE0 195 aaKnown RBP31.12■■■□□ 2.57
NEDD4L-225ENST00000589054 ARHGEF28Q8N1W1 1705 aaKnown RBP31.12■■■□□ 2.57
NEDD4L-225ENST00000589054 ATP7BP35670 1465 aa31.1■■■□□ 2.57
NEDD4L-225ENST00000589054 GPRASP1Q5JY77 1395 aa31.1■■■□□ 2.57
NEDD4L-225ENST00000589054 SEPT12Q8IYM1 358 aa31.1■■■□□ 2.57
NEDD4L-225ENST00000589054 NGDNQ8NEJ9 315 aaKnown RBP31.1■■■□□ 2.57
NEDD4L-225ENST00000589054 ALS2Q96Q42 1657 aa31.09■■■□□ 2.57
NEDD4L-225ENST00000589054 EIF3AQ14152 1382 aaKnown RBP31.09■■■□□ 2.57
NEDD4L-225ENST00000589054 CDK19Q9BWU1 502 aa31.09■■■□□ 2.57
NEDD4L-225ENST00000589054 ONECUT3O60422 494 aaPredicted RBP31.08■■■□□ 2.57
NEDD4L-225ENST00000589054 PLCH1Q4KWH8 1693 aa31.08■■■□□ 2.57
NEDD4L-225ENST00000589054 CCDC9Q9Y3X0 531 aaKnown RBP31.05■■■□□ 2.56
NEDD4L-225ENST00000589054 SRCAPQ6ZRS2 3230 aa31.04■■■□□ 2.56
NEDD4L-225ENST00000589054 PAK3O75914 559 aaPredicted RBP31.04■■■□□ 2.56
NEDD4L-225ENST00000589054 BTG4Q9NY30 223 aa31.04■■■□□ 2.56
NEDD4L-225ENST00000589054 NWD2Q9ULI1 1742 aa31.03■■■□□ 2.56
NEDD4L-225ENST00000589054 BRWD3Q6RI45 1802 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms