RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 MSH6P52701 1360 aa21.82■■□□□ 1.08
RPRD1A-208ENST00000589050 MINK1Q8N4C8 1332 aaPredicted RBP21.81■■□□□ 1.08
RPRD1A-208ENST00000589050 C19orf44Q9H6X5 657 aa21.81■■□□□ 1.08
RPRD1A-208ENST00000589050 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
RPRD1A-208ENST00000589050 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
RPRD1A-208ENST00000589050 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
RPRD1A-208ENST00000589050 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
RPRD1A-208ENST00000589050 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
RPRD1A-208ENST00000589050 IQSEC2Q5JU85 1478 aa21.79■■□□□ 1.08
RPRD1A-208ENST00000589050 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
RPRD1A-208ENST00000589050 QRICH2Q9H0J4 1663 aa21.78■■□□□ 1.08
RPRD1A-208ENST00000589050 ATF3P18847 181 aa21.77■■□□□ 1.08
RPRD1A-208ENST00000589050 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
RPRD1A-208ENST00000589050 DCCP43146 1447 aa21.76■■□□□ 1.07
RPRD1A-208ENST00000589050 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
RPRD1A-208ENST00000589050 CADPS2Q86UW7 1296 aa21.74■■□□□ 1.07
RPRD1A-208ENST00000589050 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
RPRD1A-208ENST00000589050 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
RPRD1A-208ENST00000589050 WASLO00401 505 aaPredicted RBP21.72■■□□□ 1.07
RPRD1A-208ENST00000589050 TESK2Q96S53 571 aa21.72■■□□□ 1.07
RPRD1A-208ENST00000589050 CDK19Q9BWU1 502 aa21.7■■□□□ 1.06
RPRD1A-208ENST00000589050 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
RPRD1A-208ENST00000589050 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
RPRD1A-208ENST00000589050 UBAP1LF5GYI3 381 aa21.69■■□□□ 1.06
RPRD1A-208ENST00000589050 TOM1O60784 492 aa21.69■■□□□ 1.06
RPRD1A-208ENST00000589050 TULP4Q9NRJ4 1543 aa21.69■■□□□ 1.06
RPRD1A-208ENST00000589050 SLC24A1O60721 1099 aa21.68■■□□□ 1.06
RPRD1A-208ENST00000589050 MST1RQ04912 1400 aa21.67■■□□□ 1.06
RPRD1A-208ENST00000589050 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
RPRD1A-208ENST00000589050 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
RPRD1A-208ENST00000589050 TMF1P82094 1093 aa21.66■■□□□ 1.06
RPRD1A-208ENST00000589050 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
RPRD1A-208ENST00000589050 CABP2Q9NPB3 220 aa21.65■■□□□ 1.06
RPRD1A-208ENST00000589050 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.06
RPRD1A-208ENST00000589050 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
RPRD1A-208ENST00000589050 DISP3Q9P2K9 1392 aa21.63■■□□□ 1.05
RPRD1A-208ENST00000589050 PRR36Q9H6K5 1346 aa21.62■■□□□ 1.05
RPRD1A-208ENST00000589050 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
RPRD1A-208ENST00000589050 NUDT16Q96DE0 195 aaKnown RBP21.62■■□□□ 1.05
RPRD1A-208ENST00000589050 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
RPRD1A-208ENST00000589050 ATP7BP35670 1465 aa21.6■■□□□ 1.05
RPRD1A-208ENST00000589050 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
RPRD1A-208ENST00000589050 ESCO1Q5FWF5 840 aa21.6■■□□□ 1.05
RPRD1A-208ENST00000589050 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
RPRD1A-208ENST00000589050 ORAI2Q96SN7 254 aa21.59■■□□□ 1.05
RPRD1A-208ENST00000589050 ATAD2Q6PL18 1390 aa21.58■■□□□ 1.04
RPRD1A-208ENST00000589050 BRINP3Q76B58 766 aa21.57■■□□□ 1.04
RPRD1A-208ENST00000589050 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
RPRD1A-208ENST00000589050 CCDC61Q9Y6R9 512 aa21.57■■□□□ 1.04
RPRD1A-208ENST00000589050 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
RPRD1A-208ENST00000589050 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
RPRD1A-208ENST00000589050 PPIP5K1Q6PFW1 1433 aa21.55■■□□□ 1.04
RPRD1A-208ENST00000589050 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
RPRD1A-208ENST00000589050 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
RPRD1A-208ENST00000589050 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
RPRD1A-208ENST00000589050 TMC1Q8TDI8 760 aa21.52■■□□□ 1.04
RPRD1A-208ENST00000589050 CABP1Q9NZU7 370 aa21.52■■□□□ 1.04
RPRD1A-208ENST00000589050 TOPAZ1Q8N9V7 1692 aa21.52■■□□□ 1.04
RPRD1A-208ENST00000589050 RGPD8O14715 1765 aaPredicted RBP21.51■■□□□ 1.03
RPRD1A-208ENST00000589050 ITSN1Q15811 1721 aa21.51■■□□□ 1.03
RPRD1A-208ENST00000589050 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
RPRD1A-208ENST00000589050 PLEKHG3A1L390 1219 aa21.5■■□□□ 1.03
RPRD1A-208ENST00000589050 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
RPRD1A-208ENST00000589050 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
RPRD1A-208ENST00000589050 FOXO3O43524 673 aa21.49■■□□□ 1.03
RPRD1A-208ENST00000589050 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
RPRD1A-208ENST00000589050 DDX17Q92841 729 aaKnown RBP21.48■■□□□ 1.03
RPRD1A-208ENST00000589050 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
RPRD1A-208ENST00000589050 ACEP12821 1306 aa21.48■■□□□ 1.03
RPRD1A-208ENST00000589050 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
RPRD1A-208ENST00000589050 NPHP3Q7Z494 1330 aa21.47■■□□□ 1.03
RPRD1A-208ENST00000589050 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
RPRD1A-208ENST00000589050 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
RPRD1A-208ENST00000589050 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
RPRD1A-208ENST00000589050 XPCQ01831 940 aaPredicted RBP21.44■■□□□ 1.02
RPRD1A-208ENST00000589050 PSME1Q06323 249 aa21.44■■□□□ 1.02
RPRD1A-208ENST00000589050 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
RPRD1A-208ENST00000589050 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
RPRD1A-208ENST00000589050 NHSL1Q5SYE7 1610 aa21.43■■□□□ 1.02
RPRD1A-208ENST00000589050 KRT28Q7Z3Y7 464 aa21.42■■□□□ 1.02
RPRD1A-208ENST00000589050 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
RPRD1A-208ENST00000589050 MYOM1P52179 1685 aa21.41■■□□□ 1.02
RPRD1A-208ENST00000589050 CD163L1Q9NR16 1453 aa21.41■■□□□ 1.02
RPRD1A-208ENST00000589050 CPSF1Q10570 1443 aaKnown RBP21.41■■□□□ 1.02
RPRD1A-208ENST00000589050 PXDNQ92626 1479 aa21.4■■□□□ 1.02
RPRD1A-208ENST00000589050 A0A1W2PP64 1363 aa21.4■■□□□ 1.02
RPRD1A-208ENST00000589050 SOS2Q07890 1332 aaPredicted RBP21.4■■□□□ 1.02
RPRD1A-208ENST00000589050 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
RPRD1A-208ENST00000589050 KTN1Q86UP2 1357 aaKnown RBP21.39■■□□□ 1.02
RPRD1A-208ENST00000589050 ANKRD36BQ8N2N9 1353 aa21.39■■□□□ 1.02
RPRD1A-208ENST00000589050 HSPA1LP34931 641 aa21.39■■□□□ 1.01
RPRD1A-208ENST00000589050 USP6P35125 1406 aa21.38■■□□□ 1.01
RPRD1A-208ENST00000589050 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
RPRD1A-208ENST00000589050 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
RPRD1A-208ENST00000589050 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
RPRD1A-208ENST00000589050 COL16A1Q07092 1604 aaPredicted RBP21.36■■□□□ 1.01
RPRD1A-208ENST00000589050 SBNO1A3KN83 1393 aa21.36■■□□□ 1.01
RPRD1A-208ENST00000589050 PANK3Q9H999 370 aa21.35■■□□□ 1.01
RPRD1A-208ENST00000589050 AKAP12Q02952 1782 aa21.35■■□□□ 1.01
RPRD1A-208ENST00000589050 LRRC59Q96AG4 307 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms