RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 ADGRL3Q9HAR2 1447 aa21.8■■□□□ 1.08
GCDH-209ENST00000589039 FBXO41Q8TF61 875 aa21.78■■□□□ 1.08
GCDH-209ENST00000589039 CDC42BPGQ6DT37 1551 aa21.78■■□□□ 1.08
GCDH-209ENST00000589039 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.08
GCDH-209ENST00000589039 SBNO2Q9Y2G9 1366 aa21.77■■□□□ 1.08
GCDH-209ENST00000589039 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
GCDH-209ENST00000589039 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
GCDH-209ENST00000589039 CERKQ8TCT0 537 aa21.77■■□□□ 1.08
GCDH-209ENST00000589039 RBM33Q96EV2 1170 aaKnown RBP21.77■■□□□ 1.08
GCDH-209ENST00000589039 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
GCDH-209ENST00000589039 ST20-MTHFSA0A0A6YYL1 179 aa21.75■■□□□ 1.07
GCDH-209ENST00000589039 DCCP43146 1447 aa21.74■■□□□ 1.07
GCDH-209ENST00000589039 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
GCDH-209ENST00000589039 MSH6P52701 1360 aa21.74■■□□□ 1.07
GCDH-209ENST00000589039 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
GCDH-209ENST00000589039 C19orf44Q9H6X5 657 aa21.73■■□□□ 1.07
GCDH-209ENST00000589039 MINK1Q8N4C8 1332 aaPredicted RBP21.73■■□□□ 1.07
GCDH-209ENST00000589039 RGPD8O14715 1765 aaPredicted RBP21.71■■□□□ 1.07
GCDH-209ENST00000589039 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.07
GCDH-209ENST00000589039 TESK2Q96S53 571 aa21.7■■□□□ 1.06
GCDH-209ENST00000589039 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
GCDH-209ENST00000589039 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
GCDH-209ENST00000589039 ITSN1Q15811 1721 aa21.67■■□□□ 1.06
GCDH-209ENST00000589039 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
GCDH-209ENST00000589039 WASLO00401 505 aaPredicted RBP21.66■■□□□ 1.06
GCDH-209ENST00000589039 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
GCDH-209ENST00000589039 ATF3P18847 181 aa21.65■■□□□ 1.06
GCDH-209ENST00000589039 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
GCDH-209ENST00000589039 TOPAZ1Q8N9V7 1692 aa21.63■■□□□ 1.05
GCDH-209ENST00000589039 CDK19Q9BWU1 502 aa21.63■■□□□ 1.05
GCDH-209ENST00000589039 MST1RQ04912 1400 aa21.63■■□□□ 1.05
GCDH-209ENST00000589039 TMF1P82094 1093 aa21.62■■□□□ 1.05
GCDH-209ENST00000589039 ANKARQ7Z5J8 1434 aa21.62■■□□□ 1.05
GCDH-209ENST00000589039 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
GCDH-209ENST00000589039 ATP7BP35670 1465 aa21.6■■□□□ 1.05
GCDH-209ENST00000589039 PUS7Q96PZ0 661 aaKnown RBP21.59■■□□□ 1.05
GCDH-209ENST00000589039 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
GCDH-209ENST00000589039 SRPK2P78362 688 aaKnown RBP21.58■■□□□ 1.05
GCDH-209ENST00000589039 KIF1AQ12756 1690 aa21.57■■□□□ 1.04
GCDH-209ENST00000589039 TOM1O60784 492 aa21.57■■□□□ 1.04
GCDH-209ENST00000589039 CDCA8Q53HL2 280 aa21.57■■□□□ 1.04
GCDH-209ENST00000589039 CABP2Q9NPB3 220 aa21.57■■□□□ 1.04
GCDH-209ENST00000589039 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
GCDH-209ENST00000589039 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
GCDH-209ENST00000589039 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
GCDH-209ENST00000589039 NUDT16Q96DE0 195 aaKnown RBP21.55■■□□□ 1.04
GCDH-209ENST00000589039 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
GCDH-209ENST00000589039 MYOM1P52179 1685 aa21.55■■□□□ 1.04
GCDH-209ENST00000589039 ROBO1Q9Y6N7 1651 aa21.55■■□□□ 1.04
GCDH-209ENST00000589039 UBAP1LF5GYI3 381 aa21.53■■□□□ 1.04
GCDH-209ENST00000589039 AKAP12Q02952 1782 aa21.52■■□□□ 1.04
GCDH-209ENST00000589039 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
GCDH-209ENST00000589039 C11orf95C9JLR9 678 aaPredicted RBP21.51■■□□□ 1.03
GCDH-209ENST00000589039 NHSL1Q5SYE7 1610 aa21.51■■□□□ 1.03
GCDH-209ENST00000589039 PPIP5K1Q6PFW1 1433 aa21.5■■□□□ 1.03
GCDH-209ENST00000589039 ESCO1Q5FWF5 840 aa21.49■■□□□ 1.03
GCDH-209ENST00000589039 ORAI2Q96SN7 254 aa21.49■■□□□ 1.03
GCDH-209ENST00000589039 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
GCDH-209ENST00000589039 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
GCDH-209ENST00000589039 BRINP3Q76B58 766 aa21.47■■□□□ 1.03
GCDH-209ENST00000589039 PHF8Q9UPP1 1060 aa21.47■■□□□ 1.03
GCDH-209ENST00000589039 CCDC7Q96M83 1385 aa21.47■■□□□ 1.03
GCDH-209ENST00000589039 MON2Q7Z3U7 1717 aa21.46■■□□□ 1.03
GCDH-209ENST00000589039 PLEKHG3A1L390 1219 aa21.46■■□□□ 1.03
GCDH-209ENST00000589039 CABP1Q9NZU7 370 aa21.45■■□□□ 1.02
GCDH-209ENST00000589039 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
GCDH-209ENST00000589039 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
GCDH-209ENST00000589039 POLR3AO14802 1390 aaPredicted RBP21.44■■□□□ 1.02
GCDH-209ENST00000589039 PIP4K2BP78356 416 aa21.43■■□□□ 1.02
GCDH-209ENST00000589039 PMFBP1Q8TBY8 1022 aa21.43■■□□□ 1.02
GCDH-209ENST00000589039 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
GCDH-209ENST00000589039 POLR3GLQ9BT43 218 aa21.43■■□□□ 1.02
GCDH-209ENST00000589039 PHLPP1O60346 1717 aa21.43■■□□□ 1.02
GCDH-209ENST00000589039 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
GCDH-209ENST00000589039 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
GCDH-209ENST00000589039 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
GCDH-209ENST00000589039 TRPM3Q9HCF6 1732 aaPredicted RBP21.41■■□□□ 1.02
GCDH-209ENST00000589039 CPSF1Q10570 1443 aaKnown RBP21.4■■□□□ 1.02
GCDH-209ENST00000589039 ACEP12821 1306 aa21.4■■□□□ 1.02
GCDH-209ENST00000589039 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
GCDH-209ENST00000589039 NRKQ7Z2Y5 1582 aa21.4■■□□□ 1.02
GCDH-209ENST00000589039 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
GCDH-209ENST00000589039 NGDNQ8NEJ9 315 aaKnown RBP21.39■■□□□ 1.01
GCDH-209ENST00000589039 ANKRD36BQ8N2N9 1353 aa21.38■■□□□ 1.01
GCDH-209ENST00000589039 COL16A1Q07092 1604 aaPredicted RBP21.38■■□□□ 1.01
GCDH-209ENST00000589039 FOXO3O43524 673 aa21.38■■□□□ 1.01
GCDH-209ENST00000589039 PXDNQ92626 1479 aa21.38■■□□□ 1.01
GCDH-209ENST00000589039 TERF2IPQ9NYB0 399 aa21.37■■□□□ 1.01
GCDH-209ENST00000589039 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
GCDH-209ENST00000589039 HDGFL2Q7Z4V5 671 aaPredicted RBP21.36■■□□□ 1.01
GCDH-209ENST00000589039 ZNF692Q9BU19 519 aaPredicted RBP21.36■■□□□ 1.01
GCDH-209ENST00000589039 USP6P35125 1406 aa21.36■■□□□ 1.01
GCDH-209ENST00000589039 BRD4O60885 1362 aaPredicted RBP21.35■■□□□ 1.01
GCDH-209ENST00000589039 ALS2Q96Q42 1657 aa21.34■■□□□ 1.01
GCDH-209ENST00000589039 SOS2Q07890 1332 aaPredicted RBP21.34■■□□□ 1.01
GCDH-209ENST00000589039 PSME1Q06323 249 aa21.34■■□□□ 1.01
GCDH-209ENST00000589039 DDX17Q92841 729 aaKnown RBP21.34■■□□□ 1.01
GCDH-209ENST00000589039 KTN1Q86UP2 1357 aaKnown RBP21.34■■□□□ 1.01
GCDH-209ENST00000589039 KRT28Q7Z3Y7 464 aa21.33■■□□□ 1.01
GCDH-209ENST00000589039 KIF20BQ96Q89 1820 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms