RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
MBD1-217ENST00000588937 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
MBD1-217ENST00000588937 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
MBD1-217ENST00000588937 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
MBD1-217ENST00000588937 ANKRD36BQ8N2N9 1353 aa20.23■□□□□ 0.83
MBD1-217ENST00000588937 YTHDC2Q9H6S0 1430 aaKnown RBP20.23■□□□□ 0.83
MBD1-217ENST00000588937 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
MBD1-217ENST00000588937 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
MBD1-217ENST00000588937 PTPRMP28827 1452 aa20.22■□□□□ 0.83
MBD1-217ENST00000588937 NSD2O96028 1365 aa20.22■□□□□ 0.83
MBD1-217ENST00000588937 MORC1Q86VD1 984 aa20.21■□□□□ 0.83
MBD1-217ENST00000588937 RRP1P56182 461 aaKnown RBP20.21■□□□□ 0.83
MBD1-217ENST00000588937 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
MBD1-217ENST00000588937 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
MBD1-217ENST00000588937 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
MBD1-217ENST00000588937 STK26Q9P289 416 aa20.2■□□□□ 0.82
MBD1-217ENST00000588937 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
MBD1-217ENST00000588937 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
MBD1-217ENST00000588937 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
MBD1-217ENST00000588937 POGKQ9P215 609 aa20.18■□□□□ 0.82
MBD1-217ENST00000588937 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
MBD1-217ENST00000588937 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
MBD1-217ENST00000588937 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
MBD1-217ENST00000588937 CABP2Q9NPB3 220 aa20.16■□□□□ 0.82
MBD1-217ENST00000588937 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
MBD1-217ENST00000588937 PRAM1Q96QH2 718 aa20.16■□□□□ 0.82
MBD1-217ENST00000588937 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
MBD1-217ENST00000588937 SRPK2P78362 688 aaKnown RBP20.15■□□□□ 0.82
MBD1-217ENST00000588937 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
MBD1-217ENST00000588937 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
MBD1-217ENST00000588937 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
MBD1-217ENST00000588937 SAFB2Q14151 953 aaKnown RBP eCLIP20.14■□□□□ 0.81
MBD1-217ENST00000588937 CCDC136Q96JN2 1154 aa20.14■□□□□ 0.81
MBD1-217ENST00000588937 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.81
MBD1-217ENST00000588937 SLIT1O75093 1534 aa20.13■□□□□ 0.81
MBD1-217ENST00000588937 ARHGAP23Q9P227 1491 aa20.13■□□□□ 0.81
MBD1-217ENST00000588937 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
MBD1-217ENST00000588937 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
MBD1-217ENST00000588937 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
MBD1-217ENST00000588937 MINK1Q8N4C8 1332 aaPredicted RBP20.11■□□□□ 0.81
MBD1-217ENST00000588937 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
MBD1-217ENST00000588937 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
MBD1-217ENST00000588937 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
MBD1-217ENST00000588937 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
MBD1-217ENST00000588937 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
MBD1-217ENST00000588937 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
MBD1-217ENST00000588937 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
MBD1-217ENST00000588937 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
MBD1-217ENST00000588937 APAF1O14727 1248 aa20.08■□□□□ 0.8
MBD1-217ENST00000588937 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.8
MBD1-217ENST00000588937 CEP170BQ9Y4F5 1589 aaPredicted RBP20.07■□□□□ 0.8
MBD1-217ENST00000588937 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
MBD1-217ENST00000588937 SLFN5Q08AF3 891 aa20.06■□□□□ 0.8
MBD1-217ENST00000588937 HDGFL2Q7Z4V5 671 aaPredicted RBP20.06■□□□□ 0.8
MBD1-217ENST00000588937 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
MBD1-217ENST00000588937 MED14O60244 1454 aa20.06■□□□□ 0.8
MBD1-217ENST00000588937 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
MBD1-217ENST00000588937 MTHFSP49914 203 aa20.06■□□□□ 0.8
MBD1-217ENST00000588937 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
MBD1-217ENST00000588937 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
MBD1-217ENST00000588937 E9PSI1 815 aa20.04■□□□□ 0.8
MBD1-217ENST00000588937 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
MBD1-217ENST00000588937 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
MBD1-217ENST00000588937 KNDC1Q76NI1 1749 aa20.03■□□□□ 0.8
MBD1-217ENST00000588937 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
MBD1-217ENST00000588937 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
MBD1-217ENST00000588937 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
MBD1-217ENST00000588937 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
MBD1-217ENST00000588937 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
MBD1-217ENST00000588937 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
MBD1-217ENST00000588937 ATP7BP35670 1465 aa20■□□□□ 0.79
MBD1-217ENST00000588937 LTKP29376 864 aa20■□□□□ 0.79
MBD1-217ENST00000588937 FAM135BQ49AJ0 1406 aa19.99■□□□□ 0.79
MBD1-217ENST00000588937 KIF20BQ96Q89 1820 aa19.99■□□□□ 0.79
MBD1-217ENST00000588937 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
MBD1-217ENST00000588937 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
MBD1-217ENST00000588937 TECPR2O15040 1411 aa19.98■□□□□ 0.79
MBD1-217ENST00000588937 FYB1O15117 783 aa19.97■□□□□ 0.79
MBD1-217ENST00000588937 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
MBD1-217ENST00000588937 TXNDC2Q86VQ3 553 aa19.97■□□□□ 0.79
MBD1-217ENST00000588937 CABP1Q9NZU7 370 aa19.97■□□□□ 0.79
MBD1-217ENST00000588937 IQSEC2Q5JU85 1478 aa19.97■□□□□ 0.79
MBD1-217ENST00000588937 DIP2AQ14689 1571 aa19.96■□□□□ 0.79
MBD1-217ENST00000588937 METP08581 1390 aa19.96■□□□□ 0.79
MBD1-217ENST00000588937 KDM4FA0A1W2PPD8 638 aa19.96■□□□□ 0.79
MBD1-217ENST00000588937 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
MBD1-217ENST00000588937 CPS1P31327 1500 aa19.96■□□□□ 0.79
MBD1-217ENST00000588937 WWC1Q8IX03 1113 aa19.95■□□□□ 0.78
MBD1-217ENST00000588937 PLIN1O60240 522 aa19.95■□□□□ 0.78
MBD1-217ENST00000588937 CCDC27Q2M243 656 aa19.95■□□□□ 0.78
MBD1-217ENST00000588937 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
MBD1-217ENST00000588937 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
MBD1-217ENST00000588937 TCP11L2Q8N4U5 519 aa19.93■□□□□ 0.78
MBD1-217ENST00000588937 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
MBD1-217ENST00000588937 CRBNQ96SW2 442 aa19.93■□□□□ 0.78
MBD1-217ENST00000588937 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
MBD1-217ENST00000588937 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.78
MBD1-217ENST00000588937 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
MBD1-217ENST00000588937 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
MBD1-217ENST00000588937 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms