RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
TPM4-210ENST00000588507 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
TPM4-210ENST00000588507 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
TPM4-210ENST00000588507 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 TRPM2O94759 1503 aa11.55□□□□□ -0.56
TPM4-210ENST00000588507 TRIM37O94972 964 aa11.54□□□□□ -0.56
TPM4-210ENST00000588507 GPR162Q16538 588 aa11.54□□□□□ -0.56
TPM4-210ENST00000588507 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
TPM4-210ENST00000588507 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
TPM4-210ENST00000588507 EHBP1L1Q8N3D4 1523 aa11.54□□□□□ -0.56
TPM4-210ENST00000588507 ADGRL3Q9HAR2 1447 aa11.53□□□□□ -0.56
TPM4-210ENST00000588507 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
TPM4-210ENST00000588507 APLP1P51693 650 aa11.53□□□□□ -0.56
TPM4-210ENST00000588507 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
TPM4-210ENST00000588507 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
TPM4-210ENST00000588507 CASKIN1Q8WXD9 1431 aa11.52□□□□□ -0.56
TPM4-210ENST00000588507 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
TPM4-210ENST00000588507 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM4-210ENST00000588507 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
TPM4-210ENST00000588507 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
TPM4-210ENST00000588507 RREB1Q92766 1687 aa11.52□□□□□ -0.57
TPM4-210ENST00000588507 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.57
TPM4-210ENST00000588507 PTGER2P43116 358 aa11.51□□□□□ -0.57
TPM4-210ENST00000588507 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
TPM4-210ENST00000588507 NOS1P29475 1434 aa11.51□□□□□ -0.57
TPM4-210ENST00000588507 MYOM1P52179 1685 aa11.5□□□□□ -0.57
TPM4-210ENST00000588507 FAM196AQ6ZSG2 479 aa11.5□□□□□ -0.57
TPM4-210ENST00000588507 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
TPM4-210ENST00000588507 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
TPM4-210ENST00000588507 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
TPM4-210ENST00000588507 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
TPM4-210ENST00000588507 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
TPM4-210ENST00000588507 AATKQ6ZMQ8 1374 aa11.47□□□□□ -0.57
TPM4-210ENST00000588507 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
TPM4-210ENST00000588507 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
TPM4-210ENST00000588507 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
TPM4-210ENST00000588507 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
TPM4-210ENST00000588507 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
TPM4-210ENST00000588507 XPCQ01831 940 aaPredicted RBP11.43□□□□□ -0.58
TPM4-210ENST00000588507 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
TPM4-210ENST00000588507 PDGFDQ9GZP0 370 aaPredicted RBP11.43□□□□□ -0.58
TPM4-210ENST00000588507 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
TPM4-210ENST00000588507 PXDNQ92626 1479 aa11.43□□□□□ -0.58
TPM4-210ENST00000588507 KANK1Q14678 1352 aa11.42□□□□□ -0.58
TPM4-210ENST00000588507 USP32Q8NFA0 1604 aa11.42□□□□□ -0.58
TPM4-210ENST00000588507 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
TPM4-210ENST00000588507 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
TPM4-210ENST00000588507 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
TPM4-210ENST00000588507 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
TPM4-210ENST00000588507 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
TPM4-210ENST00000588507 FOXO3O43524 673 aa11.41□□□□□ -0.58
TPM4-210ENST00000588507 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
TPM4-210ENST00000588507 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 MYO5BQ9ULV0 1848 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 ARXQ96QS3 562 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 EEA1Q15075 1411 aa11.4□□□□□ -0.58
TPM4-210ENST00000588507 PLCH1Q4KWH8 1693 aa11.4□□□□□ -0.59
TPM4-210ENST00000588507 ARHGEF5Q12774 1597 aa11.39□□□□□ -0.59
TPM4-210ENST00000588507 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
TPM4-210ENST00000588507 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
TPM4-210ENST00000588507 LRPPRCP42704 1394 aaKnown RBP11.39□□□□□ -0.59
TPM4-210ENST00000588507 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
TPM4-210ENST00000588507 MTFR1LQ9H019 292 aa11.38□□□□□ -0.59
TPM4-210ENST00000588507 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
TPM4-210ENST00000588507 NEXMIFQ5QGS0 1516 aa11.37□□□□□ -0.59
TPM4-210ENST00000588507 DUOX2Q9NRD8 1548 aa11.37□□□□□ -0.59
TPM4-210ENST00000588507 GRIN3BO60391 1043 aa11.37□□□□□ -0.59
TPM4-210ENST00000588507 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
TPM4-210ENST00000588507 SPATA31A5Q5VU36 1347 aa11.36□□□□□ -0.59
TPM4-210ENST00000588507 SPATA31A7Q8IWB4 1347 aa11.36□□□□□ -0.59
TPM4-210ENST00000588507 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
TPM4-210ENST00000588507 ABCC5O15440 1437 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 CABLES1Q8TDN4 633 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 GCC2Q8IWJ2 1684 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
TPM4-210ENST00000588507 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
TPM4-210ENST00000588507 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
TPM4-210ENST00000588507 METP08581 1390 aa11.33□□□□□ -0.6
TPM4-210ENST00000588507 KIF3CO14782 793 aa11.33□□□□□ -0.6
TPM4-210ENST00000588507 CROCC2H7BZ55 1655 aa11.33□□□□□ -0.6
TPM4-210ENST00000588507 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
TPM4-210ENST00000588507 PDE3BQ13370 1112 aa11.32□□□□□ -0.6
TPM4-210ENST00000588507 PLSCR1O15162 318 aa11.31□□□□□ -0.6
TPM4-210ENST00000588507 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
TPM4-210ENST00000588507 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
TPM4-210ENST00000588507 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
TPM4-210ENST00000588507 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
TPM4-210ENST00000588507 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
TPM4-210ENST00000588507 ADCY9O60503 1353 aa11.28□□□□□ -0.6
TPM4-210ENST00000588507 TOMM70O94826 608 aa11.28□□□□□ -0.6
TPM4-210ENST00000588507 HSPA1AP0DMV8 641 aaKnown RBP11.28□□□□□ -0.6
TPM4-210ENST00000588507 HSPA1BP0DMV9 641 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms