RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
CNTD1-204ENST00000588408 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
CNTD1-204ENST00000588408 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
CNTD1-204ENST00000588408 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
CNTD1-204ENST00000588408 SLC52A1Q9NWF4 448 aa18.3■□□□□ 0.52
CNTD1-204ENST00000588408 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
CNTD1-204ENST00000588408 SHPRHQ149N8 1683 aa18.28■□□□□ 0.52
CNTD1-204ENST00000588408 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
CNTD1-204ENST00000588408 EVC2Q86UK5 1308 aa18.27■□□□□ 0.51
CNTD1-204ENST00000588408 MLECQ14165 292 aa18.26■□□□□ 0.51
CNTD1-204ENST00000588408 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
CNTD1-204ENST00000588408 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
CNTD1-204ENST00000588408 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
CNTD1-204ENST00000588408 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
CNTD1-204ENST00000588408 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
CNTD1-204ENST00000588408 PTPRMP28827 1452 aa18.23■□□□□ 0.51
CNTD1-204ENST00000588408 MTHFSP49914 203 aa18.23■□□□□ 0.51
CNTD1-204ENST00000588408 TRMT2AQ8IZ69 625 aaKnown RBP18.23■□□□□ 0.51
CNTD1-204ENST00000588408 USP32Q8NFA0 1604 aa18.22■□□□□ 0.51
CNTD1-204ENST00000588408 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
CNTD1-204ENST00000588408 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
CNTD1-204ENST00000588408 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
CNTD1-204ENST00000588408 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
CNTD1-204ENST00000588408 ANKRD36BQ8N2N9 1353 aa18.21■□□□□ 0.51
CNTD1-204ENST00000588408 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
CNTD1-204ENST00000588408 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
CNTD1-204ENST00000588408 YTHDC2Q9H6S0 1430 aaKnown RBP18.2■□□□□ 0.5
CNTD1-204ENST00000588408 A0A1W2PP64 1363 aa18.19■□□□□ 0.5
CNTD1-204ENST00000588408 ALKQ9UM73 1620 aa18.19■□□□□ 0.5
CNTD1-204ENST00000588408 BCAR3O75815 825 aa18.18■□□□□ 0.5
CNTD1-204ENST00000588408 POGKQ9P215 609 aa18.17■□□□□ 0.5
CNTD1-204ENST00000588408 WWC1Q8IX03 1113 aa18.17■□□□□ 0.5
CNTD1-204ENST00000588408 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
CNTD1-204ENST00000588408 NKTRP30414 1462 aaKnown RBP18.16■□□□□ 0.5
CNTD1-204ENST00000588408 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
CNTD1-204ENST00000588408 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
CNTD1-204ENST00000588408 AGLP35573 1532 aa18.15■□□□□ 0.5
CNTD1-204ENST00000588408 REREQ9P2R6 1566 aa18.15■□□□□ 0.5
CNTD1-204ENST00000588408 E9PSI1 815 aa18.14■□□□□ 0.49
CNTD1-204ENST00000588408 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.49
CNTD1-204ENST00000588408 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.49
CNTD1-204ENST00000588408 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.49
CNTD1-204ENST00000588408 IQSEC2Q5JU85 1478 aa18.13■□□□□ 0.49
CNTD1-204ENST00000588408 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
CNTD1-204ENST00000588408 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
CNTD1-204ENST00000588408 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
CNTD1-204ENST00000588408 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
CNTD1-204ENST00000588408 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
CNTD1-204ENST00000588408 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
CNTD1-204ENST00000588408 SETD1AO15047 1707 aaKnown RBP18.1■□□□□ 0.49
CNTD1-204ENST00000588408 FYB1O15117 783 aa18.1■□□□□ 0.49
CNTD1-204ENST00000588408 NSD2O96028 1365 aa18.09■□□□□ 0.49
CNTD1-204ENST00000588408 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
CNTD1-204ENST00000588408 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
CNTD1-204ENST00000588408 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
CNTD1-204ENST00000588408 CFAP53Q96M91 514 aa18.09■□□□□ 0.49
CNTD1-204ENST00000588408 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
CNTD1-204ENST00000588408 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
CNTD1-204ENST00000588408 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
CNTD1-204ENST00000588408 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
CNTD1-204ENST00000588408 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.48
CNTD1-204ENST00000588408 NLRP1Q9C000 1473 aa18.07■□□□□ 0.48
CNTD1-204ENST00000588408 FBLN1P23142 703 aa18.07■□□□□ 0.48
CNTD1-204ENST00000588408 PDE4AP27815 886 aa18.07■□□□□ 0.48
CNTD1-204ENST00000588408 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
CNTD1-204ENST00000588408 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
CNTD1-204ENST00000588408 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
CNTD1-204ENST00000588408 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
CNTD1-204ENST00000588408 NINLQ9Y2I6 1382 aa18.06■□□□□ 0.48
CNTD1-204ENST00000588408 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
CNTD1-204ENST00000588408 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
CNTD1-204ENST00000588408 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
CNTD1-204ENST00000588408 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
CNTD1-204ENST00000588408 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
CNTD1-204ENST00000588408 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
CNTD1-204ENST00000588408 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
CNTD1-204ENST00000588408 U2SURPO15042 1029 aaKnown RBP18.04■□□□□ 0.48
CNTD1-204ENST00000588408 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
CNTD1-204ENST00000588408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
CNTD1-204ENST00000588408 BACH2Q9BYV9 841 aa18.03■□□□□ 0.48
CNTD1-204ENST00000588408 METP08581 1390 aa18.03■□□□□ 0.48
CNTD1-204ENST00000588408 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
CNTD1-204ENST00000588408 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
CNTD1-204ENST00000588408 KIF20BQ96Q89 1820 aa18.02■□□□□ 0.48
CNTD1-204ENST00000588408 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.47
CNTD1-204ENST00000588408 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
CNTD1-204ENST00000588408 NCKAP5LQ9HCH0 1330 aa18.01■□□□□ 0.47
CNTD1-204ENST00000588408 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
CNTD1-204ENST00000588408 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
CNTD1-204ENST00000588408 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
CNTD1-204ENST00000588408 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
CNTD1-204ENST00000588408 PLEKHF1Q96S99 279 aa18■□□□□ 0.47
CNTD1-204ENST00000588408 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
CNTD1-204ENST00000588408 MS4A1P11836 297 aa17.99■□□□□ 0.47
CNTD1-204ENST00000588408 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
CNTD1-204ENST00000588408 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
CNTD1-204ENST00000588408 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
CNTD1-204ENST00000588408 RARSP54136 660 aaKnown RBP17.99■□□□□ 0.47
CNTD1-204ENST00000588408 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
CNTD1-204ENST00000588408 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms