RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
ERCC1-206ENST00000588300 TECPR2O15040 1411 aa23.69■■□□□ 1.38
ERCC1-206ENST00000588300 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
ERCC1-206ENST00000588300 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
ERCC1-206ENST00000588300 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
ERCC1-206ENST00000588300 STK26Q9P289 416 aa23.66■■□□□ 1.38
ERCC1-206ENST00000588300 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
ERCC1-206ENST00000588300 COL22A1Q8NFW1 1626 aaPredicted RBP23.64■■□□□ 1.38
ERCC1-206ENST00000588300 ESCO1Q5FWF5 840 aa23.63■■□□□ 1.37
ERCC1-206ENST00000588300 NPHP3Q7Z494 1330 aa23.62■■□□□ 1.37
ERCC1-206ENST00000588300 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
ERCC1-206ENST00000588300 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
ERCC1-206ENST00000588300 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
ERCC1-206ENST00000588300 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
ERCC1-206ENST00000588300 UPF1Q92900 1129 aaKnown RBP eCLIP23.61■■□□□ 1.37
ERCC1-206ENST00000588300 NGLY1Q96IV0 654 aa23.61■■□□□ 1.37
ERCC1-206ENST00000588300 QTRT2Q9H974 415 aaKnown RBP23.61■■□□□ 1.37
ERCC1-206ENST00000588300 PXDNQ92626 1479 aa23.6■■□□□ 1.37
ERCC1-206ENST00000588300 FMN2Q9NZ56 1722 aa23.59■■□□□ 1.37
ERCC1-206ENST00000588300 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
ERCC1-206ENST00000588300 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
ERCC1-206ENST00000588300 MYOM2P54296 1465 aa23.58■■□□□ 1.37
ERCC1-206ENST00000588300 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
ERCC1-206ENST00000588300 RAB3GAP2Q9H2M9 1393 aa23.57■■□□□ 1.36
ERCC1-206ENST00000588300 RGS12O14924 1447 aa23.57■■□□□ 1.36
ERCC1-206ENST00000588300 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
ERCC1-206ENST00000588300 KIF1AQ12756 1690 aa23.56■■□□□ 1.36
ERCC1-206ENST00000588300 FOXO3O43524 673 aa23.55■■□□□ 1.36
ERCC1-206ENST00000588300 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
ERCC1-206ENST00000588300 MARF1Q9Y4F3 1742 aaKnown RBP23.54■■□□□ 1.36
ERCC1-206ENST00000588300 SIRT1Q96EB6 747 aa23.54■■□□□ 1.36
ERCC1-206ENST00000588300 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
ERCC1-206ENST00000588300 USP21Q9UK80 565 aa23.53■■□□□ 1.36
ERCC1-206ENST00000588300 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
ERCC1-206ENST00000588300 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
ERCC1-206ENST00000588300 FNBP4Q8N3X1 1017 aaPredicted RBP23.51■■□□□ 1.35
ERCC1-206ENST00000588300 TRPC5Q9UL62 973 aaPredicted RBP23.5■■□□□ 1.35
ERCC1-206ENST00000588300 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
ERCC1-206ENST00000588300 ATRNO75882 1429 aa23.47■■□□□ 1.35
ERCC1-206ENST00000588300 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
ERCC1-206ENST00000588300 SPATA31A3Q5VYP0 1347 aa23.44■■□□□ 1.34
ERCC1-206ENST00000588300 PRAM1Q96QH2 718 aa23.44■■□□□ 1.34
ERCC1-206ENST00000588300 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
ERCC1-206ENST00000588300 SAFB2Q14151 953 aaKnown RBP eCLIP23.42■■□□□ 1.34
ERCC1-206ENST00000588300 KRT28Q7Z3Y7 464 aa23.42■■□□□ 1.34
ERCC1-206ENST00000588300 PHF8Q9UPP1 1060 aa23.42■■□□□ 1.34
ERCC1-206ENST00000588300 ADGRB1O14514 1584 aa23.42■■□□□ 1.34
ERCC1-206ENST00000588300 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
ERCC1-206ENST00000588300 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
ERCC1-206ENST00000588300 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
ERCC1-206ENST00000588300 POGKQ9P215 609 aa23.41■■□□□ 1.34
ERCC1-206ENST00000588300 TNS3Q68CZ2 1445 aa23.4■■□□□ 1.34
ERCC1-206ENST00000588300 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
ERCC1-206ENST00000588300 PSME1Q06323 249 aa23.39■■□□□ 1.33
ERCC1-206ENST00000588300 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
ERCC1-206ENST00000588300 HRCP23327 699 aa23.36■■□□□ 1.33
ERCC1-206ENST00000588300 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
ERCC1-206ENST00000588300 KDM2AQ9Y2K7 1162 aa23.36■■□□□ 1.33
ERCC1-206ENST00000588300 SLIT2O94813 1529 aa23.36■■□□□ 1.33
ERCC1-206ENST00000588300 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
ERCC1-206ENST00000588300 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
ERCC1-206ENST00000588300 SBNO1A3KN83 1393 aa23.35■■□□□ 1.33
ERCC1-206ENST00000588300 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
ERCC1-206ENST00000588300 HAP1P54257 671 aaPredicted RBP23.34■■□□□ 1.33
ERCC1-206ENST00000588300 GJD4Q96KN9 370 aaPredicted RBP23.34■■□□□ 1.33
ERCC1-206ENST00000588300 ARHGEF10O15013 1369 aa23.33■■□□□ 1.33
ERCC1-206ENST00000588300 UNC5CLQ8IV45 518 aa23.33■■□□□ 1.33
ERCC1-206ENST00000588300 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
ERCC1-206ENST00000588300 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
ERCC1-206ENST00000588300 GLI3P10071 1580 aa23.31■■□□□ 1.32
ERCC1-206ENST00000588300 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
ERCC1-206ENST00000588300 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
ERCC1-206ENST00000588300 LMOD2Q6P5Q4 547 aa23.3■■□□□ 1.32
ERCC1-206ENST00000588300 HIRIP3Q9BW71 556 aaPredicted RBP23.3■■□□□ 1.32
ERCC1-206ENST00000588300 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
ERCC1-206ENST00000588300 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
ERCC1-206ENST00000588300 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
ERCC1-206ENST00000588300 CABLES1Q8TDN4 633 aa23.29■■□□□ 1.32
ERCC1-206ENST00000588300 TRPM3Q9HCF6 1732 aaPredicted RBP23.29■■□□□ 1.32
ERCC1-206ENST00000588300 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
ERCC1-206ENST00000588300 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
ERCC1-206ENST00000588300 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
ERCC1-206ENST00000588300 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
ERCC1-206ENST00000588300 PRR36Q9H6K5 1346 aa23.25■■□□□ 1.31
ERCC1-206ENST00000588300 ALS2Q96Q42 1657 aa23.25■■□□□ 1.31
ERCC1-206ENST00000588300 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
ERCC1-206ENST00000588300 CCDC125Q86Z20 511 aa23.23■■□□□ 1.31
ERCC1-206ENST00000588300 VPS72Q15906 364 aa23.22■■□□□ 1.31
ERCC1-206ENST00000588300 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
ERCC1-206ENST00000588300 EP400Q96L91 3159 aa23.22■■□□□ 1.31
ERCC1-206ENST00000588300 KIAA1210Q9ULL0 1709 aa23.2■■□□□ 1.3
ERCC1-206ENST00000588300 NGDNQ8NEJ9 315 aaKnown RBP23.19■■□□□ 1.3
ERCC1-206ENST00000588300 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
ERCC1-206ENST00000588300 NRAPQ86VF7 1730 aa23.19■■□□□ 1.3
ERCC1-206ENST00000588300 ATP7BP35670 1465 aa23.18■■□□□ 1.3
ERCC1-206ENST00000588300 COL14A1Q05707 1796 aaKnown RBP23.17■■□□□ 1.3
ERCC1-206ENST00000588300 CRYBG1Q9Y4K1 1723 aa23.17■■□□□ 1.3
ERCC1-206ENST00000588300 FAM83GA6ND36 823 aa23.17■■□□□ 1.3
ERCC1-206ENST00000588300 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
ERCC1-206ENST00000588300 BLMP54132 1417 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms