RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
VMP1-207ENST00000588131 TULP4Q9NRJ4 1543 aa15.75■□□□□ 0.11
VMP1-207ENST00000588131 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
VMP1-207ENST00000588131 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
VMP1-207ENST00000588131 POGKQ9P215 609 aa15.74■□□□□ 0.11
VMP1-207ENST00000588131 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
VMP1-207ENST00000588131 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
VMP1-207ENST00000588131 PTCH1Q13635 1447 aa15.72■□□□□ 0.11
VMP1-207ENST00000588131 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.71■□□□□ 0.11
VMP1-207ENST00000588131 MINK1Q8N4C8 1332 aaPredicted RBP15.71■□□□□ 0.11
VMP1-207ENST00000588131 NWD1Q149M9 1564 aa15.71■□□□□ 0.11
VMP1-207ENST00000588131 MYOM1P52179 1685 aa15.71■□□□□ 0.11
VMP1-207ENST00000588131 KCNA6P17658 529 aa15.7■□□□□ 0.1
VMP1-207ENST00000588131 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
VMP1-207ENST00000588131 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
VMP1-207ENST00000588131 EVC2Q86UK5 1308 aa15.68■□□□□ 0.1
VMP1-207ENST00000588131 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
VMP1-207ENST00000588131 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
VMP1-207ENST00000588131 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
VMP1-207ENST00000588131 NALCNQ8IZF0 1738 aa15.64■□□□□ 0.09
VMP1-207ENST00000588131 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
VMP1-207ENST00000588131 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
VMP1-207ENST00000588131 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
VMP1-207ENST00000588131 PUS7Q96PZ0 661 aaKnown RBP15.62■□□□□ 0.09
VMP1-207ENST00000588131 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
VMP1-207ENST00000588131 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
VMP1-207ENST00000588131 PANK3Q9H999 370 aa15.6■□□□□ 0.09
VMP1-207ENST00000588131 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
VMP1-207ENST00000588131 ATAD2Q6PL18 1390 aa15.6■□□□□ 0.09
VMP1-207ENST00000588131 USP32Q8NFA0 1604 aa15.58■□□□□ 0.09
VMP1-207ENST00000588131 FMN2Q9NZ56 1722 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 MIER1Q8N108 512 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 SLC12A5Q9H2X9 1139 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 ADGRL3Q9HAR2 1447 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 ATP7BP35670 1465 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
VMP1-207ENST00000588131 TOPAZ1Q8N9V7 1692 aa15.57■□□□□ 0.08
VMP1-207ENST00000588131 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
VMP1-207ENST00000588131 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
VMP1-207ENST00000588131 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
VMP1-207ENST00000588131 PROSER2Q86WR7 435 aaPredicted RBP15.56■□□□□ 0.08
VMP1-207ENST00000588131 ZNF335Q9H4Z2 1342 aaPredicted RBP15.56■□□□□ 0.08
VMP1-207ENST00000588131 CD163L1Q9NR16 1453 aa15.55■□□□□ 0.08
VMP1-207ENST00000588131 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
VMP1-207ENST00000588131 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
VMP1-207ENST00000588131 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
VMP1-207ENST00000588131 XIRP1Q702N8 1843 aaKnown RBP15.54■□□□□ 0.08
VMP1-207ENST00000588131 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
VMP1-207ENST00000588131 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
VMP1-207ENST00000588131 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
VMP1-207ENST00000588131 TMEM94Q12767 1356 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 ANP32CO43423 234 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
VMP1-207ENST00000588131 A0A1W2PP64 1363 aa15.52■□□□□ 0.08
VMP1-207ENST00000588131 ITSN1Q15811 1721 aa15.52■□□□□ 0.08
VMP1-207ENST00000588131 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.07
VMP1-207ENST00000588131 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
VMP1-207ENST00000588131 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
VMP1-207ENST00000588131 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
VMP1-207ENST00000588131 AKAP12Q02952 1782 aa15.5■□□□□ 0.07
VMP1-207ENST00000588131 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
VMP1-207ENST00000588131 FBXO41Q8TF61 875 aa15.5■□□□□ 0.07
VMP1-207ENST00000588131 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
VMP1-207ENST00000588131 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
VMP1-207ENST00000588131 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
VMP1-207ENST00000588131 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
VMP1-207ENST00000588131 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
VMP1-207ENST00000588131 KNSTRNQ9Y448 316 aa15.48■□□□□ 0.07
VMP1-207ENST00000588131 CPSF1Q10570 1443 aaKnown RBP15.48■□□□□ 0.07
VMP1-207ENST00000588131 TERF2IPQ9NYB0 399 aa15.47■□□□□ 0.07
VMP1-207ENST00000588131 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
VMP1-207ENST00000588131 CC2D1BQ5T0F9 858 aaKnown RBP15.46■□□□□ 0.07
VMP1-207ENST00000588131 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
VMP1-207ENST00000588131 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
VMP1-207ENST00000588131 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
VMP1-207ENST00000588131 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.06
VMP1-207ENST00000588131 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
VMP1-207ENST00000588131 DCCP43146 1447 aa15.45■□□□□ 0.06
VMP1-207ENST00000588131 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
VMP1-207ENST00000588131 NPC1L1Q9UHC9 1359 aa15.45■□□□□ 0.06
VMP1-207ENST00000588131 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
VMP1-207ENST00000588131 ACEP12821 1306 aa15.43■□□□□ 0.06
VMP1-207ENST00000588131 MST1RQ04912 1400 aa15.43■□□□□ 0.06
VMP1-207ENST00000588131 KIF20BQ96Q89 1820 aa15.43■□□□□ 0.06
VMP1-207ENST00000588131 POLR3AO14802 1390 aaPredicted RBP15.43■□□□□ 0.06
VMP1-207ENST00000588131 MSH6P52701 1360 aa15.43■□□□□ 0.06
VMP1-207ENST00000588131 C1orf167Q5SNV9 1468 aa15.42■□□□□ 0.06
VMP1-207ENST00000588131 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
VMP1-207ENST00000588131 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
VMP1-207ENST00000588131 ANKRD26Q9UPS8 1709 aa15.41■□□□□ 0.06
VMP1-207ENST00000588131 ATF3P18847 181 aa15.41■□□□□ 0.06
VMP1-207ENST00000588131 RALBP1Q15311 655 aa15.41■□□□□ 0.06
VMP1-207ENST00000588131 USP6P35125 1406 aa15.41■□□□□ 0.06
VMP1-207ENST00000588131 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
VMP1-207ENST00000588131 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
VMP1-207ENST00000588131 PHF8Q9UPP1 1060 aa15.4■□□□□ 0.06
VMP1-207ENST00000588131 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms