RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.86
RDH13-209ENST00000587721 ESCO1Q5FWF5 840 aa20.43■□□□□ 0.86
RDH13-209ENST00000587721 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
RDH13-209ENST00000587721 STK26Q9P289 416 aa20.42■□□□□ 0.86
RDH13-209ENST00000587721 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
RDH13-209ENST00000587721 LAMC1P11047 1609 aa20.4■□□□□ 0.86
RDH13-209ENST00000587721 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
RDH13-209ENST00000587721 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
RDH13-209ENST00000587721 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
RDH13-209ENST00000587721 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
RDH13-209ENST00000587721 WAPLQ7Z5K2 1190 aa20.37■□□□□ 0.85
RDH13-209ENST00000587721 USP21Q9UK80 565 aa20.37■□□□□ 0.85
RDH13-209ENST00000587721 TECPR2O15040 1411 aa20.36■□□□□ 0.85
RDH13-209ENST00000587721 FOXO3O43524 673 aa20.36■□□□□ 0.85
RDH13-209ENST00000587721 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
RDH13-209ENST00000587721 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
RDH13-209ENST00000587721 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
RDH13-209ENST00000587721 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
RDH13-209ENST00000587721 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.85
RDH13-209ENST00000587721 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
RDH13-209ENST00000587721 RGS12O14924 1447 aa20.32■□□□□ 0.84
RDH13-209ENST00000587721 YTHDC2Q9H6S0 1430 aaKnown RBP20.31■□□□□ 0.84
RDH13-209ENST00000587721 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
RDH13-209ENST00000587721 XPCQ01831 940 aaPredicted RBP20.3■□□□□ 0.84
RDH13-209ENST00000587721 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
RDH13-209ENST00000587721 PXDNQ92626 1479 aa20.29■□□□□ 0.84
RDH13-209ENST00000587721 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
RDH13-209ENST00000587721 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
RDH13-209ENST00000587721 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
RDH13-209ENST00000587721 MYOM2P54296 1465 aa20.27■□□□□ 0.84
RDH13-209ENST00000587721 ATAD2Q6PL18 1390 aa20.27■□□□□ 0.84
RDH13-209ENST00000587721 KNDC1Q76NI1 1749 aa20.26■□□□□ 0.83
RDH13-209ENST00000587721 PSME1Q06323 249 aa20.25■□□□□ 0.83
RDH13-209ENST00000587721 CFAP70Q5T0N1 1121 aa20.25■□□□□ 0.83
RDH13-209ENST00000587721 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
RDH13-209ENST00000587721 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
RDH13-209ENST00000587721 ATRNO75882 1429 aa20.23■□□□□ 0.83
RDH13-209ENST00000587721 HAP1P54257 671 aaPredicted RBP20.23■□□□□ 0.83
RDH13-209ENST00000587721 POGKQ9P215 609 aa20.23■□□□□ 0.83
RDH13-209ENST00000587721 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
RDH13-209ENST00000587721 NRXN1Q9ULB1 1477 aa20.22■□□□□ 0.83
RDH13-209ENST00000587721 KIF1AQ12756 1690 aa20.22■□□□□ 0.83
RDH13-209ENST00000587721 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
RDH13-209ENST00000587721 PRAM1Q96QH2 718 aa20.21■□□□□ 0.83
RDH13-209ENST00000587721 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
RDH13-209ENST00000587721 GJD4Q96KN9 370 aaPredicted RBP20.2■□□□□ 0.82
RDH13-209ENST00000587721 BCL9LQ86UU0 1499 aa20.19■□□□□ 0.82
RDH13-209ENST00000587721 SAFB2Q14151 953 aaKnown RBP eCLIP20.19■□□□□ 0.82
RDH13-209ENST00000587721 UNC5CLQ8IV45 518 aa20.18■□□□□ 0.82
RDH13-209ENST00000587721 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
RDH13-209ENST00000587721 CCDC125Q86Z20 511 aa20.17■□□□□ 0.82
RDH13-209ENST00000587721 LMOD2Q6P5Q4 547 aa20.16■□□□□ 0.82
RDH13-209ENST00000587721 SBNO1A3KN83 1393 aa20.15■□□□□ 0.82
RDH13-209ENST00000587721 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
RDH13-209ENST00000587721 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
RDH13-209ENST00000587721 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
RDH13-209ENST00000587721 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
RDH13-209ENST00000587721 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
RDH13-209ENST00000587721 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
RDH13-209ENST00000587721 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
RDH13-209ENST00000587721 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
RDH13-209ENST00000587721 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
RDH13-209ENST00000587721 SLIT2O94813 1529 aa20.12■□□□□ 0.81
RDH13-209ENST00000587721 HRCP23327 699 aa20.12■□□□□ 0.81
RDH13-209ENST00000587721 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
RDH13-209ENST00000587721 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
RDH13-209ENST00000587721 CABLES1Q8TDN4 633 aa20.1■□□□□ 0.81
RDH13-209ENST00000587721 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
RDH13-209ENST00000587721 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
RDH13-209ENST00000587721 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
RDH13-209ENST00000587721 USP32Q8NFA0 1604 aa20.09■□□□□ 0.81
RDH13-209ENST00000587721 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.08■□□□□ 0.81
RDH13-209ENST00000587721 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.81
RDH13-209ENST00000587721 VPS72Q15906 364 aa20.08■□□□□ 0.81
RDH13-209ENST00000587721 HIRIP3Q9BW71 556 aaPredicted RBP20.08■□□□□ 0.81
RDH13-209ENST00000587721 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
RDH13-209ENST00000587721 ADGRB1O14514 1584 aa20.07■□□□□ 0.8
RDH13-209ENST00000587721 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
RDH13-209ENST00000587721 ADGRB2O60241 1585 aa20.06■□□□□ 0.8
RDH13-209ENST00000587721 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
RDH13-209ENST00000587721 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
RDH13-209ENST00000587721 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
RDH13-209ENST00000587721 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
RDH13-209ENST00000587721 FAM83GA6ND36 823 aa20.02■□□□□ 0.8
RDH13-209ENST00000587721 GLI3P10071 1580 aa20.02■□□□□ 0.8
RDH13-209ENST00000587721 BLMP54132 1417 aaPredicted RBP20.02■□□□□ 0.79
RDH13-209ENST00000587721 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
RDH13-209ENST00000587721 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
RDH13-209ENST00000587721 A0A0G2JS52 829 aa20■□□□□ 0.79
RDH13-209ENST00000587721 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
RDH13-209ENST00000587721 MYT1Q01538 1121 aa20■□□□□ 0.79
RDH13-209ENST00000587721 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
RDH13-209ENST00000587721 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
RDH13-209ENST00000587721 KRT27Q7Z3Y8 459 aa19.98■□□□□ 0.79
RDH13-209ENST00000587721 BTG4Q9NY30 223 aa19.98■□□□□ 0.79
RDH13-209ENST00000587721 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
RDH13-209ENST00000587721 PLCH1Q4KWH8 1693 aa19.96■□□□□ 0.79
RDH13-209ENST00000587721 ABCA3Q99758 1704 aa19.94■□□□□ 0.78
RDH13-209ENST00000587721 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
RDH13-209ENST00000587721 FAM98CQ17RN3 349 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 486.1 ms