RNA–Protein interactions for RNA: ENST00000587579.1

SNRPD2-205, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 5

Gene SNRPD2, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-205ENST00000587579 SOS2Q07890 1332 aaPredicted RBP19.02■□□□□ 0.64
SNRPD2-205ENST00000587579 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
SNRPD2-205ENST00000587579 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
SNRPD2-205ENST00000587579 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
SNRPD2-205ENST00000587579 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
SNRPD2-205ENST00000587579 XPCQ01831 940 aaPredicted RBP19■□□□□ 0.63
SNRPD2-205ENST00000587579 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
SNRPD2-205ENST00000587579 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
SNRPD2-205ENST00000587579 LRPPRCP42704 1394 aaKnown RBP18.98■□□□□ 0.63
SNRPD2-205ENST00000587579 KNDC1Q76NI1 1749 aa18.98■□□□□ 0.63
SNRPD2-205ENST00000587579 RGS12O14924 1447 aa18.98■□□□□ 0.63
SNRPD2-205ENST00000587579 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
SNRPD2-205ENST00000587579 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
SNRPD2-205ENST00000587579 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
SNRPD2-205ENST00000587579 TECPR2O15040 1411 aa18.97■□□□□ 0.63
SNRPD2-205ENST00000587579 PXDNQ92626 1479 aa18.97■□□□□ 0.63
SNRPD2-205ENST00000587579 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
SNRPD2-205ENST00000587579 COL22A1Q8NFW1 1626 aaPredicted RBP18.96■□□□□ 0.63
SNRPD2-205ENST00000587579 FOXO3O43524 673 aa18.95■□□□□ 0.62
SNRPD2-205ENST00000587579 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
SNRPD2-205ENST00000587579 FMN2Q9NZ56 1722 aa18.94■□□□□ 0.62
SNRPD2-205ENST00000587579 YTHDC2Q9H6S0 1430 aaKnown RBP18.94■□□□□ 0.62
SNRPD2-205ENST00000587579 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
SNRPD2-205ENST00000587579 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
SNRPD2-205ENST00000587579 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 MYOM2P54296 1465 aa18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 USP21Q9UK80 565 aa18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
SNRPD2-205ENST00000587579 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
SNRPD2-205ENST00000587579 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.61
SNRPD2-205ENST00000587579 EP400Q96L91 3159 aa18.88■□□□□ 0.61
SNRPD2-205ENST00000587579 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNRPD2-205ENST00000587579 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
SNRPD2-205ENST00000587579 ATRNO75882 1429 aa18.86■□□□□ 0.61
SNRPD2-205ENST00000587579 BCL9LQ86UU0 1499 aa18.85■□□□□ 0.61
SNRPD2-205ENST00000587579 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
SNRPD2-205ENST00000587579 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
SNRPD2-205ENST00000587579 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
SNRPD2-205ENST00000587579 PRAM1Q96QH2 718 aa18.83■□□□□ 0.6
SNRPD2-205ENST00000587579 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
SNRPD2-205ENST00000587579 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
SNRPD2-205ENST00000587579 SPATA31A3Q5VYP0 1347 aa18.82■□□□□ 0.6
SNRPD2-205ENST00000587579 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
SNRPD2-205ENST00000587579 SIRT1Q96EB6 747 aa18.81■□□□□ 0.6
SNRPD2-205ENST00000587579 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
SNRPD2-205ENST00000587579 CABLES1Q8TDN4 633 aa18.8■□□□□ 0.6
SNRPD2-205ENST00000587579 PHF8Q9UPP1 1060 aa18.8■□□□□ 0.6
SNRPD2-205ENST00000587579 SRCAPQ6ZRS2 3230 aa18.79■□□□□ 0.6
SNRPD2-205ENST00000587579 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
SNRPD2-205ENST00000587579 ABCA3Q99758 1704 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 GLI3P10071 1580 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
SNRPD2-205ENST00000587579 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.59
SNRPD2-205ENST00000587579 TNS3Q68CZ2 1445 aa18.76■□□□□ 0.59
SNRPD2-205ENST00000587579 POGKQ9P215 609 aa18.76■□□□□ 0.59
SNRPD2-205ENST00000587579 SLIT2O94813 1529 aa18.75■□□□□ 0.59
SNRPD2-205ENST00000587579 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
SNRPD2-205ENST00000587579 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
SNRPD2-205ENST00000587579 MINK1Q8N4C8 1332 aaPredicted RBP18.74■□□□□ 0.59
SNRPD2-205ENST00000587579 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
SNRPD2-205ENST00000587579 ADGRB2O60241 1585 aa18.74■□□□□ 0.59
SNRPD2-205ENST00000587579 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
SNRPD2-205ENST00000587579 PLCH1Q4KWH8 1693 aa18.73■□□□□ 0.59
SNRPD2-205ENST00000587579 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
SNRPD2-205ENST00000587579 LMOD2Q6P5Q4 547 aa18.73■□□□□ 0.59
SNRPD2-205ENST00000587579 UNC5CLQ8IV45 518 aa18.73■□□□□ 0.59
SNRPD2-205ENST00000587579 PRR36Q9H6K5 1346 aa18.73■□□□□ 0.59
SNRPD2-205ENST00000587579 TRPM3Q9HCF6 1732 aaPredicted RBP18.72■□□□□ 0.59
SNRPD2-205ENST00000587579 PSME1Q06323 249 aa18.71■□□□□ 0.59
SNRPD2-205ENST00000587579 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
SNRPD2-205ENST00000587579 ANKARQ7Z5J8 1434 aa18.69■□□□□ 0.58
SNRPD2-205ENST00000587579 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
SNRPD2-205ENST00000587579 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
SNRPD2-205ENST00000587579 ALS2Q96Q42 1657 aa18.68■□□□□ 0.58
SNRPD2-205ENST00000587579 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
SNRPD2-205ENST00000587579 TULP4Q9NRJ4 1543 aa18.66■□□□□ 0.58
SNRPD2-205ENST00000587579 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
SNRPD2-205ENST00000587579 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
SNRPD2-205ENST00000587579 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
SNRPD2-205ENST00000587579 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
SNRPD2-205ENST00000587579 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
SNRPD2-205ENST00000587579 VPS72Q15906 364 aa18.63■□□□□ 0.57
SNRPD2-205ENST00000587579 SEPT12Q8IYM1 358 aa18.63■□□□□ 0.57
SNRPD2-205ENST00000587579 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
SNRPD2-205ENST00000587579 ATP7BP35670 1465 aa18.6■□□□□ 0.57
SNRPD2-205ENST00000587579 HRCP23327 699 aa18.6■□□□□ 0.57
SNRPD2-205ENST00000587579 GPRASP1Q5JY77 1395 aa18.59■□□□□ 0.57
SNRPD2-205ENST00000587579 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
SNRPD2-205ENST00000587579 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
SNRPD2-205ENST00000587579 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
SNRPD2-205ENST00000587579 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.57
SNRPD2-205ENST00000587579 ITSN1Q15811 1721 aa18.58■□□□□ 0.57
SNRPD2-205ENST00000587579 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.56
SNRPD2-205ENST00000587579 BTG4Q9NY30 223 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms