RNA–Protein interactions for RNA: ENST00000587336.1

SMAD7-205, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-205ENST00000587336 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
SMAD7-205ENST00000587336 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
SMAD7-205ENST00000587336 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
SMAD7-205ENST00000587336 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
SMAD7-205ENST00000587336 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
SMAD7-205ENST00000587336 PTCH1Q13635 1447 aa16.34■□□□□ 0.21
SMAD7-205ENST00000587336 LRP5O75197 1615 aa16.34■□□□□ 0.21
SMAD7-205ENST00000587336 ORAI2Q96SN7 254 aa16.33■□□□□ 0.2
SMAD7-205ENST00000587336 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
SMAD7-205ENST00000587336 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
SMAD7-205ENST00000587336 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
SMAD7-205ENST00000587336 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
SMAD7-205ENST00000587336 USP21Q9UK80 565 aa16.31■□□□□ 0.2
SMAD7-205ENST00000587336 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
SMAD7-205ENST00000587336 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
SMAD7-205ENST00000587336 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
SMAD7-205ENST00000587336 STK26Q9P289 416 aa16.3■□□□□ 0.2
SMAD7-205ENST00000587336 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
SMAD7-205ENST00000587336 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
SMAD7-205ENST00000587336 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
SMAD7-205ENST00000587336 IFT172Q9UG01 1749 aa16.27■□□□□ 0.19
SMAD7-205ENST00000587336 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
SMAD7-205ENST00000587336 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
SMAD7-205ENST00000587336 ATRNO75882 1429 aa16.26■□□□□ 0.19
SMAD7-205ENST00000587336 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
SMAD7-205ENST00000587336 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
SMAD7-205ENST00000587336 LAMC1P11047 1609 aa16.25■□□□□ 0.19
SMAD7-205ENST00000587336 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
SMAD7-205ENST00000587336 BLMP54132 1417 aaPredicted RBP16.24■□□□□ 0.19
SMAD7-205ENST00000587336 CDC42BPGQ6DT37 1551 aa16.23■□□□□ 0.19
SMAD7-205ENST00000587336 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
SMAD7-205ENST00000587336 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
SMAD7-205ENST00000587336 DEFB132Q7Z7B7 95 aa16.23■□□□□ 0.19
SMAD7-205ENST00000587336 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
SMAD7-205ENST00000587336 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
SMAD7-205ENST00000587336 FOXO3O43524 673 aa16.21■□□□□ 0.19
SMAD7-205ENST00000587336 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
SMAD7-205ENST00000587336 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
SMAD7-205ENST00000587336 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
SMAD7-205ENST00000587336 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
SMAD7-205ENST00000587336 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
SMAD7-205ENST00000587336 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
SMAD7-205ENST00000587336 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
SMAD7-205ENST00000587336 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
SMAD7-205ENST00000587336 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
SMAD7-205ENST00000587336 YY1P25490 414 aa16.18■□□□□ 0.18
SMAD7-205ENST00000587336 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
SMAD7-205ENST00000587336 PXDNQ92626 1479 aa16.17■□□□□ 0.18
SMAD7-205ENST00000587336 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
SMAD7-205ENST00000587336 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
SMAD7-205ENST00000587336 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
SMAD7-205ENST00000587336 TECPR2O15040 1411 aa16.17■□□□□ 0.18
SMAD7-205ENST00000587336 YTHDC2Q9H6S0 1430 aaKnown RBP16.17■□□□□ 0.18
SMAD7-205ENST00000587336 FMN2Q9NZ56 1722 aa16.16■□□□□ 0.18
SMAD7-205ENST00000587336 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
SMAD7-205ENST00000587336 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMAD7-205ENST00000587336 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
SMAD7-205ENST00000587336 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
SMAD7-205ENST00000587336 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
SMAD7-205ENST00000587336 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
SMAD7-205ENST00000587336 MYOM2P54296 1465 aa16.14■□□□□ 0.17
SMAD7-205ENST00000587336 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
SMAD7-205ENST00000587336 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
SMAD7-205ENST00000587336 C14orf93Q9H972 538 aaKnown RBP16.11■□□□□ 0.17
SMAD7-205ENST00000587336 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
SMAD7-205ENST00000587336 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
SMAD7-205ENST00000587336 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
SMAD7-205ENST00000587336 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
SMAD7-205ENST00000587336 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.16
SMAD7-205ENST00000587336 POGKQ9P215 609 aa16.08■□□□□ 0.16
SMAD7-205ENST00000587336 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
SMAD7-205ENST00000587336 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
SMAD7-205ENST00000587336 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.16
SMAD7-205ENST00000587336 NRXN1Q9ULB1 1477 aa16.08■□□□□ 0.16
SMAD7-205ENST00000587336 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
SMAD7-205ENST00000587336 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
SMAD7-205ENST00000587336 PMFBP1Q8TBY8 1022 aa16.06■□□□□ 0.16
SMAD7-205ENST00000587336 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
SMAD7-205ENST00000587336 GLI3P10071 1580 aa16.05■□□□□ 0.16
SMAD7-205ENST00000587336 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
SMAD7-205ENST00000587336 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
SMAD7-205ENST00000587336 TRAK1Q9UPV9 953 aa16.05■□□□□ 0.16
SMAD7-205ENST00000587336 TNS3Q68CZ2 1445 aa16.04■□□□□ 0.16
SMAD7-205ENST00000587336 BAG6P46379 1132 aa16.04■□□□□ 0.16
SMAD7-205ENST00000587336 PSME1Q06323 249 aa16.04■□□□□ 0.16
SMAD7-205ENST00000587336 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.04■□□□□ 0.16
SMAD7-205ENST00000587336 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
SMAD7-205ENST00000587336 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
SMAD7-205ENST00000587336 BRWD3Q6RI45 1802 aa16.03■□□□□ 0.16
SMAD7-205ENST00000587336 MINK1Q8N4C8 1332 aaPredicted RBP16.02■□□□□ 0.16
SMAD7-205ENST00000587336 R3HDM1Q15032 1099 aaKnown RBP16.02■□□□□ 0.16
SMAD7-205ENST00000587336 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.16
SMAD7-205ENST00000587336 ABCA3Q99758 1704 aa16.02■□□□□ 0.15
SMAD7-205ENST00000587336 SLIT2O94813 1529 aa16.01■□□□□ 0.15
SMAD7-205ENST00000587336 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
SMAD7-205ENST00000587336 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
SMAD7-205ENST00000587336 PLCH1Q4KWH8 1693 aa16.01■□□□□ 0.15
SMAD7-205ENST00000587336 ADGRB1O14514 1584 aa16■□□□□ 0.15
SMAD7-205ENST00000587336 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
SMAD7-205ENST00000587336 KRT27Q7Z3Y8 459 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms