RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 RETREG3Q86VR2 466 aa6.96□□□□□ -1.3
NEDD4L-217ENST00000587246 USB1Q9BQ65 265 aaKnown RBP6.96□□□□□ -1.3
NEDD4L-217ENST00000587246 FAM117AQ9C073 453 aa6.96□□□□□ -1.3
NEDD4L-217ENST00000587246 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.3
NEDD4L-217ENST00000587246 SLC6A16Q9GZN6 736 aa6.95□□□□□ -1.3
NEDD4L-217ENST00000587246 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 CLK2P49760 499 aaKnown RBP6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 MTMR2Q13614 643 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 ANKLE1Q8NAG6 615 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 NKX2-3Q8TAU0 364 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 ZBTB3Q9H5J0 574 aa6.94□□□□□ -1.3
NEDD4L-217ENST00000587246 C6orf229H3BNL8 230 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 TLL1O43897 1013 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 NDUFV2P19404 249 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 MMP16P51512 607 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 RNF19BQ6ZMZ0 732 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
NEDD4L-217ENST00000587246 FAM160A2Q8N612 972 aaPredicted RBP6.92□□□□□ -1.3
NEDD4L-217ENST00000587246 HLA-CQ95604 372 aa6.92□□□□□ -1.3
NEDD4L-217ENST00000587246 DXOO77932 396 aaKnown RBP6.91□□□□□ -1.3
NEDD4L-217ENST00000587246 S1PR4O95977 384 aa6.91□□□□□ -1.3
NEDD4L-217ENST00000587246 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
NEDD4L-217ENST00000587246 LILRB3O75022 631 aa6.9□□□□□ -1.3
NEDD4L-217ENST00000587246 JUNDP17535 347 aa6.9□□□□□ -1.3
NEDD4L-217ENST00000587246 GUCA2AQ02747 115 aa6.9□□□□□ -1.3
NEDD4L-217ENST00000587246 V9GY48 417 aaPredicted RBP6.9□□□□□ -1.3
NEDD4L-217ENST00000587246 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
NEDD4L-217ENST00000587246 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
NEDD4L-217ENST00000587246 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD4L-217ENST00000587246 LIMD1Q9UGP4 676 aa6.89□□□□□ -1.31
NEDD4L-217ENST00000587246 HRCP23327 699 aa6.88□□□□□ -1.31
NEDD4L-217ENST00000587246 PPP2R2DQ66LE6 453 aa6.88□□□□□ -1.31
NEDD4L-217ENST00000587246 POLR3EQ9NVU0 708 aa6.88□□□□□ -1.31
NEDD4L-217ENST00000587246 PCDHB15Q9Y5E8 787 aa6.88□□□□□ -1.31
NEDD4L-217ENST00000587246 NUTM2BA6NNL0 878 aaPredicted RBP6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 NUTM2EB1AL46 878 aaPredicted RBP6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 RPIAP49247 311 aa6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 PTPRNQ16849 979 aa6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 NUTM2DQ5VT03 806 aaPredicted RBP6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 NUTM2AQ8IVF1 878 aaPredicted RBP6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
NEDD4L-217ENST00000587246 HELBQ8NG08 1087 aaPredicted RBP6.86□□□□□ -1.31
NEDD4L-217ENST00000587246 SYMPKQ92797 1274 aaKnown RBP6.85□□□□□ -1.31
NEDD4L-217ENST00000587246 FCF1Q9Y324 198 aaKnown RBP6.85□□□□□ -1.31
NEDD4L-217ENST00000587246 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 SLC19A1P41440 591 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 QPCTQ16769 361 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 LYPD8Q6UX82 237 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
NEDD4L-217ENST00000587246 CFAP99D6REC4 459 aa6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 ZBTB24O43167 697 aaPredicted RBP6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 CD2BP2O95400 341 aaKnown RBP6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 NUDT12Q9BQG2 462 aa6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 PRKD2Q9BZL6 878 aa6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 ATP1B4Q9UN42 357 aaPredicted RBP6.83□□□□□ -1.32
NEDD4L-217ENST00000587246 PROCA1Q8NCQ7 364 aaPredicted RBP6.82□□□□□ -1.32
NEDD4L-217ENST00000587246 EVA1BQ9NVM1 165 aa6.82□□□□□ -1.32
NEDD4L-217ENST00000587246 SOCS7O14512 581 aa6.81□□□□□ -1.32
NEDD4L-217ENST00000587246 PPEF1O14829 653 aaPredicted RBP6.81□□□□□ -1.32
NEDD4L-217ENST00000587246 RTL5Q5HYW3 569 aaPredicted RBP6.81□□□□□ -1.32
NEDD4L-217ENST00000587246 KCNH2Q12809 1159 aa6.8□□□□□ -1.32
NEDD4L-217ENST00000587246 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
NEDD4L-217ENST00000587246 SPRYD7Q5W111 196 aa6.8□□□□□ -1.32
NEDD4L-217ENST00000587246 ZNF598Q86UK7 904 aaKnown RBP6.8□□□□□ -1.32
NEDD4L-217ENST00000587246 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
NEDD4L-217ENST00000587246 RFC5P40937 340 aa6.79□□□□□ -1.32
NEDD4L-217ENST00000587246 WNT7BP56706 349 aa6.79□□□□□ -1.32
NEDD4L-217ENST00000587246 ARMC2Q8NEN0 867 aa6.79□□□□□ -1.32
NEDD4L-217ENST00000587246 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 TRIM32Q13049 653 aa6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 PLA2G2CQ5R387 149 aa6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 LIAT1Q6ZQX7 453 aa6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 CCDC24Q8N4L8 307 aa6.78□□□□□ -1.32
NEDD4L-217ENST00000587246 APBB1O00213 710 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PRR20EP86478 221 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PRR20CP86479 221 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PRR20DP86480 221 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PRR20BP86481 221 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PRR20AP86496 221 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 PNMA1Q8ND90 353 aa6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
NEDD4L-217ENST00000587246 AP1G2O75843 785 aa6.76□□□□□ -1.33
NEDD4L-217ENST00000587246 TSC1Q92574 1164 aa6.76□□□□□ -1.33
NEDD4L-217ENST00000587246 GPKOWQ92917 476 aaPredicted RBP eCLIP6.76□□□□□ -1.33
NEDD4L-217ENST00000587246 ZC3H4Q9UPT8 1303 aaKnown RBP6.76□□□□□ -1.33
NEDD4L-217ENST00000587246 ZNF697Q5TEC3 545 aa6.75□□□□□ -1.33
NEDD4L-217ENST00000587246 UNC93B1Q9H1C4 597 aa6.75□□□□□ -1.33
NEDD4L-217ENST00000587246 PER1O15534 1290 aaPredicted RBP6.74□□□□□ -1.33
NEDD4L-217ENST00000587246 CTHP32929 405 aa6.74□□□□□ -1.33
NEDD4L-217ENST00000587246 CTDSPL2Q05D32 466 aa6.74□□□□□ -1.33
NEDD4L-217ENST00000587246 NBPF14Q5TI25 921 aa6.74□□□□□ -1.33
NEDD4L-217ENST00000587246 WNT7AO00755 349 aa6.73□□□□□ -1.33
NEDD4L-217ENST00000587246 USP17L8P0C7I0 530 aa6.73□□□□□ -1.33
NEDD4L-217ENST00000587246 PTCRAQ6ISU1 281 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms