RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 POLR3AO14802 1390 aaPredicted RBP27.27■■□□□ 1.96
CACTIN-205ENST00000587175 GOLGA2Q08379 1002 aa27.27■■□□□ 1.96
CACTIN-205ENST00000587175 CCDC146Q8IYE0 955 aa27.27■■□□□ 1.96
CACTIN-205ENST00000587175 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
CACTIN-205ENST00000587175 CGNL1Q0VF96 1302 aa27.27■■□□□ 1.96
CACTIN-205ENST00000587175 EXOC6Q8TAG9 804 aa27.26■■□□□ 1.96
CACTIN-205ENST00000587175 KIF13AQ9H1H9 1805 aa27.26■■□□□ 1.95
CACTIN-205ENST00000587175 SAFB2Q14151 953 aaKnown RBP eCLIP27.26■■□□□ 1.95
CACTIN-205ENST00000587175 ZNF521Q96K83 1311 aa27.26■■□□□ 1.95
CACTIN-205ENST00000587175 ANKRD36BQ8N2N9 1353 aa27.25■■□□□ 1.95
CACTIN-205ENST00000587175 NOP58Q9Y2X3 529 aaKnown RBP27.24■■□□□ 1.95
CACTIN-205ENST00000587175 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
CACTIN-205ENST00000587175 YTHDC2Q9H6S0 1430 aaKnown RBP27.21■■□□□ 1.95
CACTIN-205ENST00000587175 APAF1O14727 1248 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 TNNT2P45379 298 aaPredicted RBP27.21■■□□□ 1.95
CACTIN-205ENST00000587175 DUSP27Q5VZP5 1158 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 ALKQ9UM73 1620 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 PTPRMP28827 1452 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 SPATA31D1Q6ZQQ2 1576 aa27.21■■□□□ 1.95
CACTIN-205ENST00000587175 NSD2O96028 1365 aa27.2■■□□□ 1.94
CACTIN-205ENST00000587175 SHPRHQ149N8 1683 aa27.2■■□□□ 1.94
CACTIN-205ENST00000587175 NINLQ9Y2I6 1382 aa27.19■■□□□ 1.94
CACTIN-205ENST00000587175 SRPK2P78362 688 aaKnown RBP27.19■■□□□ 1.94
CACTIN-205ENST00000587175 MLECQ14165 292 aa27.19■■□□□ 1.94
CACTIN-205ENST00000587175 NGEFQ8N5V2 710 aa27.19■■□□□ 1.94
CACTIN-205ENST00000587175 POGKQ9P215 609 aa27.19■■□□□ 1.94
CACTIN-205ENST00000587175 BCL11AQ9H165 835 aa27.18■■□□□ 1.94
CACTIN-205ENST00000587175 PLIN1O60240 522 aa27.18■■□□□ 1.94
CACTIN-205ENST00000587175 ANP32AP39687 249 aaKnown RBP27.17■■□□□ 1.94
CACTIN-205ENST00000587175 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
CACTIN-205ENST00000587175 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
CACTIN-205ENST00000587175 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
CACTIN-205ENST00000587175 MINK1Q8N4C8 1332 aaPredicted RBP27.15■■□□□ 1.94
CACTIN-205ENST00000587175 CFAP53Q96M91 514 aa27.14■■□□□ 1.94
CACTIN-205ENST00000587175 A2ML1A8K2U0 1454 aa27.14■■□□□ 1.94
CACTIN-205ENST00000587175 ESF1Q9H501 851 aaKnown RBP27.13■■□□□ 1.93
CACTIN-205ENST00000587175 IPO9Q96P70 1041 aaKnown RBP27.12■■□□□ 1.93
CACTIN-205ENST00000587175 MTHFSP49914 203 aa27.11■■□□□ 1.93
CACTIN-205ENST00000587175 A0A1W2PP64 1363 aa27.11■■□□□ 1.93
CACTIN-205ENST00000587175 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
CACTIN-205ENST00000587175 E9PSI1 815 aa27.1■■□□□ 1.93
CACTIN-205ENST00000587175 TRMT2AQ8IZ69 625 aaKnown RBP27.1■■□□□ 1.93
CACTIN-205ENST00000587175 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.1■■□□□ 1.93
CACTIN-205ENST00000587175 CRBNQ96SW2 442 aa27.09■■□□□ 1.93
CACTIN-205ENST00000587175 PAK3O75914 559 aaPredicted RBP27.09■■□□□ 1.93
CACTIN-205ENST00000587175 NKTRP30414 1462 aaKnown RBP27.08■■□□□ 1.93
CACTIN-205ENST00000587175 ABCC11Q96J66 1382 aa27.08■■□□□ 1.93
CACTIN-205ENST00000587175 TERF2IPQ9NYB0 399 aa27.08■■□□□ 1.93
CACTIN-205ENST00000587175 TCERG1O14776 1098 aaKnown RBP27.08■■□□□ 1.92
CACTIN-205ENST00000587175 ANKRD26Q9UPS8 1709 aa27.06■■□□□ 1.92
CACTIN-205ENST00000587175 RUNDC1Q96C34 613 aa27.06■■□□□ 1.92
CACTIN-205ENST00000587175 SETD1AO15047 1707 aaKnown RBP27.06■■□□□ 1.92
CACTIN-205ENST00000587175 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
CACTIN-205ENST00000587175 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
CACTIN-205ENST00000587175 CDK19Q9BWU1 502 aa27.02■■□□□ 1.92
CACTIN-205ENST00000587175 ZMYM3Q14202 1370 aa27.02■■□□□ 1.92
CACTIN-205ENST00000587175 HDGFL2Q7Z4V5 671 aaPredicted RBP27.02■■□□□ 1.92
CACTIN-205ENST00000587175 WWC1Q8IX03 1113 aa27.02■■□□□ 1.92
CACTIN-205ENST00000587175 C20orf194Q5TEA3 1177 aa27.01■■□□□ 1.91
CACTIN-205ENST00000587175 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.01■■□□□ 1.91
CACTIN-205ENST00000587175 ZBTB47Q9UFB7 747 aaPredicted RBP27.01■■□□□ 1.91
CACTIN-205ENST00000587175 IQSEC2Q5JU85 1478 aa27■■□□□ 1.91
CACTIN-205ENST00000587175 CD163L1Q9NR16 1453 aa26.99■■□□□ 1.91
CACTIN-205ENST00000587175 KIF20BQ96Q89 1820 aa26.99■■□□□ 1.91
CACTIN-205ENST00000587175 TCP11L2Q8N4U5 519 aa26.98■■□□□ 1.91
CACTIN-205ENST00000587175 GGNBP2Q9H3C7 697 aa26.98■■□□□ 1.91
CACTIN-205ENST00000587175 MS4A1P11836 297 aa26.98■■□□□ 1.91
CACTIN-205ENST00000587175 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
CACTIN-205ENST00000587175 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
CACTIN-205ENST00000587175 MED14O60244 1454 aa26.97■■□□□ 1.91
CACTIN-205ENST00000587175 NRXN3Q9Y4C0 1643 aa26.96■■□□□ 1.91
CACTIN-205ENST00000587175 U2AF1L5P0DN76 240 aaPredicted RBP26.95■■□□□ 1.9
CACTIN-205ENST00000587175 U2AF1Q01081 240 aaKnown RBP eCLIP26.95■■□□□ 1.9
CACTIN-205ENST00000587175 RRP7AQ9Y3A4 280 aaKnown RBP26.95■■□□□ 1.9
CACTIN-205ENST00000587175 HDGFP51858 240 aaKnown RBP26.94■■□□□ 1.9
CACTIN-205ENST00000587175 FYB1O15117 783 aa26.94■■□□□ 1.9
CACTIN-205ENST00000587175 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
CACTIN-205ENST00000587175 CABP1Q9NZU7 370 aa26.94■■□□□ 1.9
CACTIN-205ENST00000587175 PDE4AP27815 886 aa26.93■■□□□ 1.9
CACTIN-205ENST00000587175 NBR1Q14596 966 aa26.93■■□□□ 1.9
CACTIN-205ENST00000587175 TNRQ92752 1358 aa26.92■■□□□ 1.9
CACTIN-205ENST00000587175 DEKP35659 375 aaKnown RBP26.92■■□□□ 1.9
CACTIN-205ENST00000587175 NLRP1Q9C000 1473 aa26.91■■□□□ 1.9
CACTIN-205ENST00000587175 WDR63Q8IWG1 891 aa26.9■■□□□ 1.9
CACTIN-205ENST00000587175 BACH2Q9BYV9 841 aa26.9■■□□□ 1.9
CACTIN-205ENST00000587175 CCDC27Q2M243 656 aa26.9■■□□□ 1.9
CACTIN-205ENST00000587175 BCAR3O75815 825 aa26.89■■□□□ 1.9
CACTIN-205ENST00000587175 ATP7BP35670 1465 aa26.89■■□□□ 1.9
CACTIN-205ENST00000587175 KNDC1Q76NI1 1749 aa26.89■■□□□ 1.89
CACTIN-205ENST00000587175 PHF23Q9BUL5 403 aaPredicted RBP26.89■■□□□ 1.89
CACTIN-205ENST00000587175 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
CACTIN-205ENST00000587175 ADGRB2O60241 1585 aa26.88■■□□□ 1.89
CACTIN-205ENST00000587175 UBR1Q8IWV7 1749 aa26.87■■□□□ 1.89
CACTIN-205ENST00000587175 U2SURPO15042 1029 aaKnown RBP26.86■■□□□ 1.89
CACTIN-205ENST00000587175 METP08581 1390 aa26.86■■□□□ 1.89
CACTIN-205ENST00000587175 COL3A1P02461 1466 aaPredicted RBP26.86■■□□□ 1.89
CACTIN-205ENST00000587175 NPM2Q86SE8 214 aaKnown RBP26.84■■□□□ 1.89
CACTIN-205ENST00000587175 CENPQQ7L2Z9 268 aaPredicted RBP26.83■■□□□ 1.89
CACTIN-205ENST00000587175 WASLO00401 505 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms