RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
ATG4D-206ENST00000586863 C8orf37Q96NL8 207 aa20.86■□□□□ 0.93
ATG4D-206ENST00000586863 RXRBP28702 533 aa20.85■□□□□ 0.93
ATG4D-206ENST00000586863 STK26Q9P289 416 aa20.85■□□□□ 0.93
ATG4D-206ENST00000586863 TMEM132EQ6IEE7 984 aa20.84■□□□□ 0.93
ATG4D-206ENST00000586863 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
ATG4D-206ENST00000586863 PLEKHH1Q9ULM0 1364 aa20.84■□□□□ 0.93
ATG4D-206ENST00000586863 CDK12Q9NYV4 1490 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-206ENST00000586863 ABCC11Q96J66 1382 aa20.83■□□□□ 0.92
ATG4D-206ENST00000586863 COL22A1Q8NFW1 1626 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-206ENST00000586863 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
ATG4D-206ENST00000586863 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
ATG4D-206ENST00000586863 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
ATG4D-206ENST00000586863 PXDNQ92626 1479 aa20.81■□□□□ 0.92
ATG4D-206ENST00000586863 ESCO1Q5FWF5 840 aa20.8■□□□□ 0.92
ATG4D-206ENST00000586863 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
ATG4D-206ENST00000586863 NRXN1Q9ULB1 1477 aa20.8■□□□□ 0.92
ATG4D-206ENST00000586863 UPF1Q92900 1129 aaKnown RBP eCLIP20.79■□□□□ 0.92
ATG4D-206ENST00000586863 MYOM2P54296 1465 aa20.79■□□□□ 0.92
ATG4D-206ENST00000586863 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
ATG4D-206ENST00000586863 RGS12O14924 1447 aa20.78■□□□□ 0.92
ATG4D-206ENST00000586863 NUTM2FA1L443 756 aa20.78■□□□□ 0.92
ATG4D-206ENST00000586863 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
ATG4D-206ENST00000586863 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
ATG4D-206ENST00000586863 XPCQ01831 940 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-206ENST00000586863 QTRT2Q9H974 415 aaKnown RBP20.76■□□□□ 0.91
ATG4D-206ENST00000586863 FOXO3O43524 673 aa20.75■□□□□ 0.91
ATG4D-206ENST00000586863 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
ATG4D-206ENST00000586863 C14orf93Q9H972 538 aaKnown RBP20.75■□□□□ 0.91
ATG4D-206ENST00000586863 RGPD8O14715 1765 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-206ENST00000586863 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
ATG4D-206ENST00000586863 KIF1AQ12756 1690 aa20.73■□□□□ 0.91
ATG4D-206ENST00000586863 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
ATG4D-206ENST00000586863 USP21Q9UK80 565 aa20.71■□□□□ 0.91
ATG4D-206ENST00000586863 FNBP4Q8N3X1 1017 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-206ENST00000586863 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
ATG4D-206ENST00000586863 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
ATG4D-206ENST00000586863 EP400Q96L91 3159 aa20.69■□□□□ 0.9
ATG4D-206ENST00000586863 ATRNO75882 1429 aa20.68■□□□□ 0.9
ATG4D-206ENST00000586863 DLC1Q96QB1 1528 aa20.68■□□□□ 0.9
ATG4D-206ENST00000586863 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
ATG4D-206ENST00000586863 TRPC5Q9UL62 973 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-206ENST00000586863 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
ATG4D-206ENST00000586863 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
ATG4D-206ENST00000586863 BCL9LQ86UU0 1499 aa20.65■□□□□ 0.9
ATG4D-206ENST00000586863 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
ATG4D-206ENST00000586863 USP32Q8NFA0 1604 aa20.64■□□□□ 0.9
ATG4D-206ENST00000586863 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
ATG4D-206ENST00000586863 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
ATG4D-206ENST00000586863 KRT28Q7Z3Y7 464 aa20.62■□□□□ 0.89
ATG4D-206ENST00000586863 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
ATG4D-206ENST00000586863 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
ATG4D-206ENST00000586863 POGKQ9P215 609 aa20.6■□□□□ 0.89
ATG4D-206ENST00000586863 ABCA3Q99758 1704 aa20.6■□□□□ 0.89
ATG4D-206ENST00000586863 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
ATG4D-206ENST00000586863 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
ATG4D-206ENST00000586863 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
ATG4D-206ENST00000586863 SLIT2O94813 1529 aa20.58■□□□□ 0.89
ATG4D-206ENST00000586863 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
ATG4D-206ENST00000586863 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
ATG4D-206ENST00000586863 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
ATG4D-206ENST00000586863 SBNO1A3KN83 1393 aa20.56■□□□□ 0.88
ATG4D-206ENST00000586863 GLI3P10071 1580 aa20.55■□□□□ 0.88
ATG4D-206ENST00000586863 HRCP23327 699 aa20.55■□□□□ 0.88
ATG4D-206ENST00000586863 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-206ENST00000586863 TRPM3Q9HCF6 1732 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-206ENST00000586863 PLCH1Q4KWH8 1693 aa20.54■□□□□ 0.88
ATG4D-206ENST00000586863 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
ATG4D-206ENST00000586863 PSME1Q06323 249 aa20.54■□□□□ 0.88
ATG4D-206ENST00000586863 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
ATG4D-206ENST00000586863 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
ATG4D-206ENST00000586863 GJD4Q96KN9 370 aaPredicted RBP20.54■□□□□ 0.88
ATG4D-206ENST00000586863 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
ATG4D-206ENST00000586863 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
ATG4D-206ENST00000586863 UNC5CLQ8IV45 518 aa20.53■□□□□ 0.88
ATG4D-206ENST00000586863 RALGAPBQ86X10 1494 aa20.53■□□□□ 0.88
ATG4D-206ENST00000586863 TULP4Q9NRJ4 1543 aa20.53■□□□□ 0.88
ATG4D-206ENST00000586863 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
ATG4D-206ENST00000586863 ARHGEF10O15013 1369 aa20.52■□□□□ 0.88
ATG4D-206ENST00000586863 NWD2Q9ULI1 1742 aa20.51■□□□□ 0.87
ATG4D-206ENST00000586863 HAP1P54257 671 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-206ENST00000586863 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
ATG4D-206ENST00000586863 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
ATG4D-206ENST00000586863 BRWD3Q6RI45 1802 aa20.5■□□□□ 0.87
ATG4D-206ENST00000586863 EIF3AQ14152 1382 aaKnown RBP20.49■□□□□ 0.87
ATG4D-206ENST00000586863 STAC3Q96MF2 364 aa20.49■□□□□ 0.87
ATG4D-206ENST00000586863 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-206ENST00000586863 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
ATG4D-206ENST00000586863 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
ATG4D-206ENST00000586863 ATP7BP35670 1465 aa20.45■□□□□ 0.86
ATG4D-206ENST00000586863 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.86
ATG4D-206ENST00000586863 GPRASP1Q5JY77 1395 aa20.45■□□□□ 0.86
ATG4D-206ENST00000586863 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
ATG4D-206ENST00000586863 VPS72Q15906 364 aa20.44■□□□□ 0.86
ATG4D-206ENST00000586863 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
ATG4D-206ENST00000586863 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
ATG4D-206ENST00000586863 COL14A1Q05707 1796 aaKnown RBP20.41■□□□□ 0.86
ATG4D-206ENST00000586863 SEPT12Q8IYM1 358 aa20.4■□□□□ 0.86
ATG4D-206ENST00000586863 TOPAZ1Q8N9V7 1692 aa20.4■□□□□ 0.86
ATG4D-206ENST00000586863 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms