RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 IFT172Q9UG01 1749 aa19.08■□□□□ 0.65
CNN1-205ENST00000586577 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.64
CNN1-205ENST00000586577 C1orf167Q5SNV9 1468 aa19.07■□□□□ 0.64
CNN1-205ENST00000586577 SOS2Q07890 1332 aaPredicted RBP19.06■□□□□ 0.64
CNN1-205ENST00000586577 LAMC1P11047 1609 aa19.06■□□□□ 0.64
CNN1-205ENST00000586577 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
CNN1-205ENST00000586577 METP08581 1390 aa19.05■□□□□ 0.64
CNN1-205ENST00000586577 ACIN1Q9UKV3 1341 aaKnown RBP19.02■□□□□ 0.64
CNN1-205ENST00000586577 HRCP23327 699 aa19.02■□□□□ 0.64
CNN1-205ENST00000586577 SF3B2Q13435 895 aaKnown RBP19.02■□□□□ 0.64
CNN1-205ENST00000586577 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
CNN1-205ENST00000586577 GJD4Q96KN9 370 aaPredicted RBP19.01■□□□□ 0.63
CNN1-205ENST00000586577 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
CNN1-205ENST00000586577 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
CNN1-205ENST00000586577 RGL3Q3MIN7 710 aa19■□□□□ 0.63
CNN1-205ENST00000586577 ORAI2Q96SN7 254 aa19■□□□□ 0.63
CNN1-205ENST00000586577 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
CNN1-205ENST00000586577 ADGRF5Q8IZF2 1346 aa18.99■□□□□ 0.63
CNN1-205ENST00000586577 NPHP3Q7Z494 1330 aa18.98■□□□□ 0.63
CNN1-205ENST00000586577 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
CNN1-205ENST00000586577 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
CNN1-205ENST00000586577 MARF1Q9Y4F3 1742 aaKnown RBP18.96■□□□□ 0.63
CNN1-205ENST00000586577 MYOM2P54296 1465 aa18.96■□□□□ 0.63
CNN1-205ENST00000586577 LRP5O75197 1615 aa18.96■□□□□ 0.63
CNN1-205ENST00000586577 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
CNN1-205ENST00000586577 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
CNN1-205ENST00000586577 LRPPRCP42704 1394 aaKnown RBP18.92■□□□□ 0.62
CNN1-205ENST00000586577 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
CNN1-205ENST00000586577 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
CNN1-205ENST00000586577 ESCO1Q5FWF5 840 aa18.91■□□□□ 0.62
CNN1-205ENST00000586577 DEFB132Q7Z7B7 95 aa18.91■□□□□ 0.62
CNN1-205ENST00000586577 ROBO2Q9HCK4 1378 aa18.89■□□□□ 0.61
CNN1-205ENST00000586577 RALGAPBQ86X10 1494 aa18.89■□□□□ 0.61
CNN1-205ENST00000586577 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
CNN1-205ENST00000586577 PXDNQ92626 1479 aa18.86■□□□□ 0.61
CNN1-205ENST00000586577 FOXO3O43524 673 aa18.86■□□□□ 0.61
CNN1-205ENST00000586577 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
CNN1-205ENST00000586577 BRWD3Q6RI45 1802 aa18.85■□□□□ 0.61
CNN1-205ENST00000586577 GLI3P10071 1580 aa18.85■□□□□ 0.61
CNN1-205ENST00000586577 SLIT2O94813 1529 aa18.84■□□□□ 0.61
CNN1-205ENST00000586577 KNDC1Q76NI1 1749 aa18.84■□□□□ 0.61
CNN1-205ENST00000586577 BAG6P46379 1132 aa18.84■□□□□ 0.61
CNN1-205ENST00000586577 SEPT12Q8IYM1 358 aa18.84■□□□□ 0.61
CNN1-205ENST00000586577 XPCQ01831 940 aaPredicted RBP18.83■□□□□ 0.6
CNN1-205ENST00000586577 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
CNN1-205ENST00000586577 CDC42BPGQ6DT37 1551 aa18.83■□□□□ 0.6
CNN1-205ENST00000586577 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
CNN1-205ENST00000586577 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
CNN1-205ENST00000586577 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
CNN1-205ENST00000586577 TECPR2O15040 1411 aa18.81■□□□□ 0.6
CNN1-205ENST00000586577 PSDA5PKW4 1024 aaPredicted RBP18.8■□□□□ 0.6
CNN1-205ENST00000586577 VPS72Q15906 364 aa18.8■□□□□ 0.6
CNN1-205ENST00000586577 C14orf93Q9H972 538 aaKnown RBP18.8■□□□□ 0.6
CNN1-205ENST00000586577 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
CNN1-205ENST00000586577 TRIM26Q12899 539 aaPredicted RBP18.79■□□□□ 0.6
CNN1-205ENST00000586577 ADGRB1O14514 1584 aa18.79■□□□□ 0.6
CNN1-205ENST00000586577 PLEKHH1Q9ULM0 1364 aa18.79■□□□□ 0.6
CNN1-205ENST00000586577 YTHDC2Q9H6S0 1430 aaKnown RBP18.78■□□□□ 0.6
CNN1-205ENST00000586577 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
CNN1-205ENST00000586577 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
CNN1-205ENST00000586577 STK26Q9P289 416 aa18.78■□□□□ 0.6
CNN1-205ENST00000586577 KDM2AQ9Y2K7 1162 aa18.78■□□□□ 0.6
CNN1-205ENST00000586577 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
CNN1-205ENST00000586577 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
CNN1-205ENST00000586577 A0A0G2JS52 829 aa18.76■□□□□ 0.59
CNN1-205ENST00000586577 MYT1Q01538 1121 aa18.76■□□□□ 0.59
CNN1-205ENST00000586577 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
CNN1-205ENST00000586577 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
CNN1-205ENST00000586577 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
CNN1-205ENST00000586577 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
CNN1-205ENST00000586577 SIN3AQ96ST3 1273 aa18.74■□□□□ 0.59
CNN1-205ENST00000586577 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
CNN1-205ENST00000586577 PSME1Q06323 249 aa18.73■□□□□ 0.59
CNN1-205ENST00000586577 KRT28Q7Z3Y7 464 aa18.72■□□□□ 0.59
CNN1-205ENST00000586577 PLCH1Q4KWH8 1693 aa18.69■□□□□ 0.58
CNN1-205ENST00000586577 TNS3Q68CZ2 1445 aa18.69■□□□□ 0.58
CNN1-205ENST00000586577 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
CNN1-205ENST00000586577 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
CNN1-205ENST00000586577 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
CNN1-205ENST00000586577 YY1P25490 414 aa18.68■□□□□ 0.58
CNN1-205ENST00000586577 EN1Q05925 392 aaPredicted RBP18.68■□□□□ 0.58
CNN1-205ENST00000586577 R3HDM1Q15032 1099 aaKnown RBP18.68■□□□□ 0.58
CNN1-205ENST00000586577 ARHGEF28Q8N1W1 1705 aaKnown RBP18.67■□□□□ 0.58
CNN1-205ENST00000586577 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
CNN1-205ENST00000586577 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
CNN1-205ENST00000586577 FAM98CQ17RN3 349 aaKnown RBP18.66■□□□□ 0.58
CNN1-205ENST00000586577 LMOD2Q6P5Q4 547 aa18.66■□□□□ 0.58
CNN1-205ENST00000586577 CABLES1Q8TDN4 633 aa18.65■□□□□ 0.58
CNN1-205ENST00000586577 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
CNN1-205ENST00000586577 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
CNN1-205ENST00000586577 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
CNN1-205ENST00000586577 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
CNN1-205ENST00000586577 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
CNN1-205ENST00000586577 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
CNN1-205ENST00000586577 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
CNN1-205ENST00000586577 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
CNN1-205ENST00000586577 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
CNN1-205ENST00000586577 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
CNN1-205ENST00000586577 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
CNN1-205ENST00000586577 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms