RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 ZNF772Q68DY9 489 aaPredicted RBP24.96■■□□□ 1.59
TRIM47-203ENST00000586495 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.58
TRIM47-203ENST00000586495 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
TRIM47-203ENST00000586495 MYOM2P54296 1465 aa24.94■■□□□ 1.58
TRIM47-203ENST00000586495 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
TRIM47-203ENST00000586495 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
TRIM47-203ENST00000586495 SIRT1Q96EB6 747 aa24.92■■□□□ 1.58
TRIM47-203ENST00000586495 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
TRIM47-203ENST00000586495 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
TRIM47-203ENST00000586495 SOS2Q07890 1332 aaPredicted RBP24.91■■□□□ 1.58
TRIM47-203ENST00000586495 NRXN1Q9ULB1 1477 aa24.91■■□□□ 1.58
TRIM47-203ENST00000586495 KNDC1Q76NI1 1749 aa24.9■■□□□ 1.58
TRIM47-203ENST00000586495 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
TRIM47-203ENST00000586495 CFAP70Q5T0N1 1121 aa24.9■■□□□ 1.58
TRIM47-203ENST00000586495 LAMC1P11047 1609 aa24.89■■□□□ 1.57
TRIM47-203ENST00000586495 NPHP3Q7Z494 1330 aa24.87■■□□□ 1.57
TRIM47-203ENST00000586495 PLEKHH1Q9ULM0 1364 aa24.87■■□□□ 1.57
TRIM47-203ENST00000586495 STAC3Q96MF2 364 aa24.85■■□□□ 1.57
TRIM47-203ENST00000586495 NUTM2FA1L443 756 aa24.84■■□□□ 1.57
TRIM47-203ENST00000586495 DCAF11Q8TEB1 546 aa24.83■■□□□ 1.57
TRIM47-203ENST00000586495 AFF2P51816 1311 aa24.83■■□□□ 1.56
TRIM47-203ENST00000586495 FOXO3O43524 673 aa24.82■■□□□ 1.56
TRIM47-203ENST00000586495 C8orf37Q96NL8 207 aa24.82■■□□□ 1.56
TRIM47-203ENST00000586495 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
TRIM47-203ENST00000586495 RXRBP28702 533 aa24.81■■□□□ 1.56
TRIM47-203ENST00000586495 PRAM1Q96QH2 718 aa24.79■■□□□ 1.56
TRIM47-203ENST00000586495 ADAMTS2O95450 1211 aa24.78■■□□□ 1.56
TRIM47-203ENST00000586495 POGKQ9P215 609 aa24.78■■□□□ 1.56
TRIM47-203ENST00000586495 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
TRIM47-203ENST00000586495 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
TRIM47-203ENST00000586495 FMN2Q9NZ56 1722 aa24.76■■□□□ 1.55
TRIM47-203ENST00000586495 SAFB2Q14151 953 aaKnown RBP eCLIP24.76■■□□□ 1.55
TRIM47-203ENST00000586495 XPCQ01831 940 aaPredicted RBP24.75■■□□□ 1.55
TRIM47-203ENST00000586495 PXDNQ92626 1479 aa24.75■■□□□ 1.55
TRIM47-203ENST00000586495 QTRT2Q9H974 415 aaKnown RBP24.74■■□□□ 1.55
TRIM47-203ENST00000586495 TRAK1Q9UPV9 953 aa24.74■■□□□ 1.55
TRIM47-203ENST00000586495 ADGRB1O14514 1584 aa24.72■■□□□ 1.55
TRIM47-203ENST00000586495 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
TRIM47-203ENST00000586495 COL22A1Q8NFW1 1626 aaPredicted RBP24.72■■□□□ 1.55
TRIM47-203ENST00000586495 PHF8Q9UPP1 1060 aa24.71■■□□□ 1.55
TRIM47-203ENST00000586495 CDK12Q9NYV4 1490 aaPredicted RBP24.7■■□□□ 1.55
TRIM47-203ENST00000586495 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
TRIM47-203ENST00000586495 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.54
TRIM47-203ENST00000586495 PSME1Q06323 249 aa24.68■■□□□ 1.54
TRIM47-203ENST00000586495 USP21Q9UK80 565 aa24.68■■□□□ 1.54
TRIM47-203ENST00000586495 SPATA31A3Q5VYP0 1347 aa24.67■■□□□ 1.54
TRIM47-203ENST00000586495 FNBP4Q8N3X1 1017 aaPredicted RBP24.66■■□□□ 1.54
TRIM47-203ENST00000586495 ANKARQ7Z5J8 1434 aa24.65■■□□□ 1.54
TRIM47-203ENST00000586495 TRPC5Q9UL62 973 aaPredicted RBP24.65■■□□□ 1.54
TRIM47-203ENST00000586495 EIF3AQ14152 1382 aaKnown RBP24.64■■□□□ 1.53
TRIM47-203ENST00000586495 MINK1Q8N4C8 1332 aaPredicted RBP24.63■■□□□ 1.53
TRIM47-203ENST00000586495 ADGRB2O60241 1585 aa24.63■■□□□ 1.53
TRIM47-203ENST00000586495 RGPD8O14715 1765 aaPredicted RBP24.63■■□□□ 1.53
TRIM47-203ENST00000586495 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
TRIM47-203ENST00000586495 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
TRIM47-203ENST00000586495 WASLO00401 505 aaPredicted RBP24.6■■□□□ 1.53
TRIM47-203ENST00000586495 PMFBP1Q8TBY8 1022 aa24.6■■□□□ 1.53
TRIM47-203ENST00000586495 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
TRIM47-203ENST00000586495 TNS3Q68CZ2 1445 aa24.6■■□□□ 1.53
TRIM47-203ENST00000586495 HAP1P54257 671 aaPredicted RBP24.58■■□□□ 1.53
TRIM47-203ENST00000586495 RGS12O14924 1447 aa24.58■■□□□ 1.53
TRIM47-203ENST00000586495 LMOD2Q6P5Q4 547 aa24.56■■□□□ 1.52
TRIM47-203ENST00000586495 TULP4Q9NRJ4 1543 aa24.56■■□□□ 1.52
TRIM47-203ENST00000586495 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
TRIM47-203ENST00000586495 MARF1Q9Y4F3 1742 aaKnown RBP24.55■■□□□ 1.52
TRIM47-203ENST00000586495 ATRNO75882 1429 aa24.55■■□□□ 1.52
TRIM47-203ENST00000586495 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
TRIM47-203ENST00000586495 GPRASP1Q5JY77 1395 aa24.54■■□□□ 1.52
TRIM47-203ENST00000586495 BCL9LQ86UU0 1499 aa24.53■■□□□ 1.52
TRIM47-203ENST00000586495 PRR36Q9H6K5 1346 aa24.53■■□□□ 1.52
TRIM47-203ENST00000586495 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
TRIM47-203ENST00000586495 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
TRIM47-203ENST00000586495 UNC5CLQ8IV45 518 aa24.5■■□□□ 1.51
TRIM47-203ENST00000586495 NGDNQ8NEJ9 315 aaKnown RBP24.5■■□□□ 1.51
TRIM47-203ENST00000586495 CABLES1Q8TDN4 633 aa24.5■■□□□ 1.51
TRIM47-203ENST00000586495 PLEKHG5O94827 1062 aa24.49■■□□□ 1.51
TRIM47-203ENST00000586495 GJD4Q96KN9 370 aaPredicted RBP24.49■■□□□ 1.51
TRIM47-203ENST00000586495 SLIT2O94813 1529 aa24.48■■□□□ 1.51
TRIM47-203ENST00000586495 NBPF1Q3BBV0 1214 aa24.48■■□□□ 1.51
TRIM47-203ENST00000586495 NUDT16Q96DE0 195 aaKnown RBP24.48■■□□□ 1.51
TRIM47-203ENST00000586495 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
TRIM47-203ENST00000586495 L3MBTL2Q969R5 705 aa24.45■■□□□ 1.5
TRIM47-203ENST00000586495 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.44■■□□□ 1.5
TRIM47-203ENST00000586495 ATAD2Q6PL18 1390 aa24.44■■□□□ 1.5
TRIM47-203ENST00000586495 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
TRIM47-203ENST00000586495 ATP7BP35670 1465 aa24.43■■□□□ 1.5
TRIM47-203ENST00000586495 ITSN1Q15811 1721 aa24.42■■□□□ 1.5
TRIM47-203ENST00000586495 TRPM3Q9HCF6 1732 aaPredicted RBP24.42■■□□□ 1.5
TRIM47-203ENST00000586495 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
TRIM47-203ENST00000586495 CCDC61Q9Y6R9 512 aa24.41■■□□□ 1.5
TRIM47-203ENST00000586495 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
TRIM47-203ENST00000586495 NEUROD1Q13562 356 aa24.4■■□□□ 1.5
TRIM47-203ENST00000586495 FAM83GA6ND36 823 aa24.39■■□□□ 1.49
TRIM47-203ENST00000586495 VPS72Q15906 364 aa24.39■■□□□ 1.49
TRIM47-203ENST00000586495 RALGAPBQ86X10 1494 aa24.38■■□□□ 1.49
TRIM47-203ENST00000586495 ABCA3Q99758 1704 aa24.38■■□□□ 1.49
TRIM47-203ENST00000586495 ALS2Q96Q42 1657 aa24.38■■□□□ 1.49
TRIM47-203ENST00000586495 NWD2Q9ULI1 1742 aa24.36■■□□□ 1.49
TRIM47-203ENST00000586495 PLEKHG3A1L390 1219 aa24.36■■□□□ 1.49
TRIM47-203ENST00000586495 SRPK2P78362 688 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms