RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 WAPLQ7Z5K2 1190 aa23.89■■□□□ 1.42
PRKCSH-203ENST00000586486 PROSER2Q86WR7 435 aaPredicted RBP23.88■■□□□ 1.41
PRKCSH-203ENST00000586486 TMEM94Q12767 1356 aa23.86■■□□□ 1.41
PRKCSH-203ENST00000586486 ADGRL3Q9HAR2 1447 aa23.86■■□□□ 1.41
PRKCSH-203ENST00000586486 TESK2Q96S53 571 aa23.85■■□□□ 1.41
PRKCSH-203ENST00000586486 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
PRKCSH-203ENST00000586486 SLC24A1O60721 1099 aa23.83■■□□□ 1.41
PRKCSH-203ENST00000586486 SAFB2Q14151 953 aaKnown RBP eCLIP23.83■■□□□ 1.41
PRKCSH-203ENST00000586486 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
PRKCSH-203ENST00000586486 DCCP43146 1447 aa23.8■■□□□ 1.4
PRKCSH-203ENST00000586486 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
PRKCSH-203ENST00000586486 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
PRKCSH-203ENST00000586486 FMN2Q9NZ56 1722 aa23.78■■□□□ 1.4
PRKCSH-203ENST00000586486 HIRIP3Q9BW71 556 aaPredicted RBP23.77■■□□□ 1.4
PRKCSH-203ENST00000586486 C19orf44Q9H6X5 657 aa23.76■■□□□ 1.39
PRKCSH-203ENST00000586486 MSH6P52701 1360 aa23.75■■□□□ 1.39
PRKCSH-203ENST00000586486 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
PRKCSH-203ENST00000586486 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
PRKCSH-203ENST00000586486 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
PRKCSH-203ENST00000586486 DISP3Q9P2K9 1392 aa23.75■■□□□ 1.39
PRKCSH-203ENST00000586486 TMF1P82094 1093 aa23.74■■□□□ 1.39
PRKCSH-203ENST00000586486 WASLO00401 505 aaPredicted RBP23.73■■□□□ 1.39
PRKCSH-203ENST00000586486 PUS7Q96PZ0 661 aaKnown RBP23.7■■□□□ 1.39
PRKCSH-203ENST00000586486 USP32Q8NFA0 1604 aa23.7■■□□□ 1.38
PRKCSH-203ENST00000586486 ANKARQ7Z5J8 1434 aa23.7■■□□□ 1.38
PRKCSH-203ENST00000586486 CDCA8Q53HL2 280 aa23.7■■□□□ 1.38
PRKCSH-203ENST00000586486 ATP7BP35670 1465 aa23.69■■□□□ 1.38
PRKCSH-203ENST00000586486 CDK19Q9BWU1 502 aa23.69■■□□□ 1.38
PRKCSH-203ENST00000586486 TOPAZ1Q8N9V7 1692 aa23.69■■□□□ 1.38
PRKCSH-203ENST00000586486 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
PRKCSH-203ENST00000586486 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
PRKCSH-203ENST00000586486 ATAD2Q6PL18 1390 aa23.66■■□□□ 1.38
PRKCSH-203ENST00000586486 MST1RQ04912 1400 aa23.66■■□□□ 1.38
PRKCSH-203ENST00000586486 C11orf95C9JLR9 678 aaPredicted RBP23.66■■□□□ 1.38
PRKCSH-203ENST00000586486 ATF3P18847 181 aa23.66■■□□□ 1.38
PRKCSH-203ENST00000586486 SRPK2P78362 688 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-203ENST00000586486 MYOM1P52179 1685 aa23.64■■□□□ 1.38
PRKCSH-203ENST00000586486 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.38
PRKCSH-203ENST00000586486 CABP2Q9NPB3 220 aa23.64■■□□□ 1.38
PRKCSH-203ENST00000586486 KIF7Q2M1P5 1343 aa23.64■■□□□ 1.37
PRKCSH-203ENST00000586486 CCDC7Q96M83 1385 aa23.64■■□□□ 1.37
PRKCSH-203ENST00000586486 CERKQ8TCT0 537 aa23.62■■□□□ 1.37
PRKCSH-203ENST00000586486 WASHC2AQ641Q2 1341 aa23.62■■□□□ 1.37
PRKCSH-203ENST00000586486 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
PRKCSH-203ENST00000586486 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
PRKCSH-203ENST00000586486 ZNF316A6NFI3 1004 aaPredicted RBP23.62■■□□□ 1.37
PRKCSH-203ENST00000586486 NUDT16Q96DE0 195 aaKnown RBP23.61■■□□□ 1.37
PRKCSH-203ENST00000586486 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
PRKCSH-203ENST00000586486 CCDC61Q9Y6R9 512 aa23.59■■□□□ 1.37
PRKCSH-203ENST00000586486 KIF1AQ12756 1690 aa23.59■■□□□ 1.37
PRKCSH-203ENST00000586486 PPIP5K1Q6PFW1 1433 aa23.57■■□□□ 1.36
PRKCSH-203ENST00000586486 NUTM2FA1L443 756 aa23.56■■□□□ 1.36
PRKCSH-203ENST00000586486 SLAIN2Q9P270 581 aa23.55■■□□□ 1.36
PRKCSH-203ENST00000586486 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
PRKCSH-203ENST00000586486 PLEKHG3A1L390 1219 aa23.52■■□□□ 1.36
PRKCSH-203ENST00000586486 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
PRKCSH-203ENST00000586486 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
PRKCSH-203ENST00000586486 CD163L1Q9NR16 1453 aa23.51■■□□□ 1.35
PRKCSH-203ENST00000586486 POLR3AO14802 1390 aaPredicted RBP23.51■■□□□ 1.35
PRKCSH-203ENST00000586486 TOM1O60784 492 aa23.51■■□□□ 1.35
PRKCSH-203ENST00000586486 CABP1Q9NZU7 370 aa23.51■■□□□ 1.35
PRKCSH-203ENST00000586486 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
PRKCSH-203ENST00000586486 PHF8Q9UPP1 1060 aa23.5■■□□□ 1.35
PRKCSH-203ENST00000586486 ROBO1Q9Y6N7 1651 aa23.5■■□□□ 1.35
PRKCSH-203ENST00000586486 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 ANKRD36BQ8N2N9 1353 aa23.49■■□□□ 1.35
PRKCSH-203ENST00000586486 BRINP3Q76B58 766 aa23.48■■□□□ 1.35
PRKCSH-203ENST00000586486 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
PRKCSH-203ENST00000586486 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
PRKCSH-203ENST00000586486 A0A1W2PP64 1363 aa23.46■■□□□ 1.35
PRKCSH-203ENST00000586486 TERF2IPQ9NYB0 399 aa23.45■■□□□ 1.34
PRKCSH-203ENST00000586486 ACEP12821 1306 aa23.45■■□□□ 1.34
PRKCSH-203ENST00000586486 NRKQ7Z2Y5 1582 aa23.45■■□□□ 1.34
PRKCSH-203ENST00000586486 PMFBP1Q8TBY8 1022 aa23.44■■□□□ 1.34
PRKCSH-203ENST00000586486 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
PRKCSH-203ENST00000586486 HDGFL2Q7Z4V5 671 aaPredicted RBP23.42■■□□□ 1.34
PRKCSH-203ENST00000586486 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
PRKCSH-203ENST00000586486 ZNF692Q9BU19 519 aaPredicted RBP23.42■■□□□ 1.34
PRKCSH-203ENST00000586486 USP6P35125 1406 aa23.42■■□□□ 1.34
PRKCSH-203ENST00000586486 BRD4O60885 1362 aaPredicted RBP23.41■■□□□ 1.34
PRKCSH-203ENST00000586486 NPHP3Q7Z494 1330 aa23.41■■□□□ 1.34
PRKCSH-203ENST00000586486 TRPM3Q9HCF6 1732 aaPredicted RBP23.4■■□□□ 1.34
PRKCSH-203ENST00000586486 KTN1Q86UP2 1357 aaKnown RBP23.4■■□□□ 1.34
PRKCSH-203ENST00000586486 PXDNQ92626 1479 aa23.39■■□□□ 1.34
PRKCSH-203ENST00000586486 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.34
PRKCSH-203ENST00000586486 SSH2Q76I76 1423 aa23.39■■□□□ 1.34
PRKCSH-203ENST00000586486 PANK3Q9H999 370 aa23.39■■□□□ 1.33
PRKCSH-203ENST00000586486 FOXO3O43524 673 aa23.38■■□□□ 1.33
PRKCSH-203ENST00000586486 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
PRKCSH-203ENST00000586486 CARD14Q9BXL6 1004 aa23.36■■□□□ 1.33
PRKCSH-203ENST00000586486 NSD3Q9BZ95 1437 aa23.36■■□□□ 1.33
PRKCSH-203ENST00000586486 PIP4K2BP78356 416 aa23.35■■□□□ 1.33
PRKCSH-203ENST00000586486 PSME1Q06323 249 aa23.34■■□□□ 1.33
PRKCSH-203ENST00000586486 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
PRKCSH-203ENST00000586486 PHLPP1O60346 1717 aa23.34■■□□□ 1.33
PRKCSH-203ENST00000586486 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms