RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
TPM4-203ENST00000586193 HELBQ8NG08 1087 aaPredicted RBP10.39□□□□□ -0.75
TPM4-203ENST00000586193 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
TPM4-203ENST00000586193 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
TPM4-203ENST00000586193 GCGRP47871 477 aa10.38□□□□□ -0.75
TPM4-203ENST00000586193 SEMA3FQ13275 785 aa10.38□□□□□ -0.75
TPM4-203ENST00000586193 SMAPO00193 183 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 C7P10643 843 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 SOX11P35716 441 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 MTMR2Q13614 643 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
TPM4-203ENST00000586193 NISCHQ9Y2I1 1504 aa10.35□□□□□ -0.75
TPM4-203ENST00000586193 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
TPM4-203ENST00000586193 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
TPM4-203ENST00000586193 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
TPM4-203ENST00000586193 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
TPM4-203ENST00000586193 UNCXA6NJT0 531 aa10.34□□□□□ -0.75
TPM4-203ENST00000586193 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
TPM4-203ENST00000586193 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
TPM4-203ENST00000586193 RSPH4AQ5TD94 716 aa10.33□□□□□ -0.76
TPM4-203ENST00000586193 ATP9BO43861 1147 aa10.32□□□□□ -0.76
TPM4-203ENST00000586193 GABBR2O75899 941 aa10.32□□□□□ -0.76
TPM4-203ENST00000586193 NR6A1Q15406 480 aa10.32□□□□□ -0.76
TPM4-203ENST00000586193 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
TPM4-203ENST00000586193 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
TPM4-203ENST00000586193 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
TPM4-203ENST00000586193 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
TPM4-203ENST00000586193 SLC10A3P09131 477 aa10.3□□□□□ -0.76
TPM4-203ENST00000586193 PTPREP23469 700 aa10.3□□□□□ -0.76
TPM4-203ENST00000586193 SLF2Q8IX21 1173 aa10.3□□□□□ -0.76
TPM4-203ENST00000586193 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
TPM4-203ENST00000586193 KANK4Q5T7N3 995 aaPredicted RBP10.29□□□□□ -0.76
TPM4-203ENST00000586193 USP35Q9P2H5 1018 aa10.29□□□□□ -0.76
TPM4-203ENST00000586193 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM4-203ENST00000586193 TMEM164Q5U3C3 297 aa10.28□□□□□ -0.76
TPM4-203ENST00000586193 PNMA1Q8ND90 353 aa10.28□□□□□ -0.76
TPM4-203ENST00000586193 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
TPM4-203ENST00000586193 ZMIZ1Q9ULJ6 1067 aa10.28□□□□□ -0.76
TPM4-203ENST00000586193 STK32AQ8WU08 396 aa10.27□□□□□ -0.77
TPM4-203ENST00000586193 RBM47A0AV96 593 aaKnown RBP10.26□□□□□ -0.77
TPM4-203ENST00000586193 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
TPM4-203ENST00000586193 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
TPM4-203ENST00000586193 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
TPM4-203ENST00000586193 PROX2Q3B8N5 592 aa10.26□□□□□ -0.77
TPM4-203ENST00000586193 GPR153Q6NV75 609 aa10.26□□□□□ -0.77
TPM4-203ENST00000586193 TXNDC2Q86VQ3 553 aa10.26□□□□□ -0.77
TPM4-203ENST00000586193 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
TPM4-203ENST00000586193 SWT1Q5T5J6 900 aaKnown RBP10.25□□□□□ -0.77
TPM4-203ENST00000586193 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
TPM4-203ENST00000586193 NOVA2Q9UNW9 492 aaKnown RBP10.25□□□□□ -0.77
TPM4-203ENST00000586193 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
TPM4-203ENST00000586193 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
TPM4-203ENST00000586193 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
TPM4-203ENST00000586193 FUT2Q10981 343 aa10.22□□□□□ -0.77
TPM4-203ENST00000586193 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
TPM4-203ENST00000586193 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
TPM4-203ENST00000586193 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
TPM4-203ENST00000586193 NR1H3Q13133 447 aa10.21□□□□□ -0.77
TPM4-203ENST00000586193 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.77
TPM4-203ENST00000586193 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
TPM4-203ENST00000586193 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
TPM4-203ENST00000586193 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
TPM4-203ENST00000586193 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
TPM4-203ENST00000586193 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
TPM4-203ENST00000586193 SKIP12755 728 aa10.19□□□□□ -0.78
TPM4-203ENST00000586193 ARID4AP29374 1257 aaPredicted RBP10.19□□□□□ -0.78
TPM4-203ENST00000586193 DNAJC14Q6Y2X3 702 aaPredicted RBP10.19□□□□□ -0.78
TPM4-203ENST00000586193 FBXO45P0C2W1 286 aa10.18□□□□□ -0.78
TPM4-203ENST00000586193 SSFA2P28290 1259 aa10.18□□□□□ -0.78
TPM4-203ENST00000586193 MRRFQ96E11 262 aaKnown RBP10.18□□□□□ -0.78
TPM4-203ENST00000586193 KIAA1522Q9P206 1035 aaPredicted RBP10.18□□□□□ -0.78
TPM4-203ENST00000586193 SLAIN2Q9P270 581 aa10.18□□□□□ -0.78
TPM4-203ENST00000586193 DEPDC4Q8N2C3 294 aa10.17□□□□□ -0.78
TPM4-203ENST00000586193 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
TPM4-203ENST00000586193 USP17L5A8MUK1 530 aa10.16□□□□□ -0.78
TPM4-203ENST00000586193 ERCC3P19447 782 aa10.16□□□□□ -0.78
TPM4-203ENST00000586193 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
TPM4-203ENST00000586193 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
TPM4-203ENST00000586193 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L15C9J2P7 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L10C9JJH3 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L13C9JLJ4 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L12C9JPN9 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L11C9JVI0 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L21D6R901 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L18D6R9N7 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L22D6RA61 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L17D6RBQ6 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L19D6RCP7 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L20D6RJB6 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 CFHP08603 1231 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 USP17L24Q0WX57 530 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 CRTC2Q53ET0 693 aaPredicted RBP10.15□□□□□ -0.78
TPM4-203ENST00000586193 NOM1Q5C9Z4 860 aaKnown RBP10.15□□□□□ -0.78
TPM4-203ENST00000586193 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.78
TPM4-203ENST00000586193 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
TPM4-203ENST00000586193 FAM196BA6NMK8 535 aa10.14□□□□□ -0.79
TPM4-203ENST00000586193 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms