RNA–Protein interactions for RNA: ENST00000585864.1

SEC11C-203, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11C, Length 1,088 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-203ENST00000585864 RXRBP28702 533 aa23.75■■□□□ 1.39
SEC11C-203ENST00000585864 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
SEC11C-203ENST00000585864 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
SEC11C-203ENST00000585864 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
SEC11C-203ENST00000585864 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
SEC11C-203ENST00000585864 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
SEC11C-203ENST00000585864 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
SEC11C-203ENST00000585864 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
SEC11C-203ENST00000585864 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
SEC11C-203ENST00000585864 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
SEC11C-203ENST00000585864 LAMC1P11047 1609 aa23.71■■□□□ 1.39
SEC11C-203ENST00000585864 AFF2P51816 1311 aa23.71■■□□□ 1.39
SEC11C-203ENST00000585864 CDC42BPGQ6DT37 1551 aa23.7■■□□□ 1.38
SEC11C-203ENST00000585864 YTHDC2Q9H6S0 1430 aaKnown RBP23.7■■□□□ 1.38
SEC11C-203ENST00000585864 IFT172Q9UG01 1749 aa23.7■■□□□ 1.38
SEC11C-203ENST00000585864 C8orf37Q96NL8 207 aa23.69■■□□□ 1.38
SEC11C-203ENST00000585864 NGLY1Q96IV0 654 aa23.68■■□□□ 1.38
SEC11C-203ENST00000585864 MYOM2P54296 1465 aa23.68■■□□□ 1.38
SEC11C-203ENST00000585864 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
SEC11C-203ENST00000585864 CDK12Q9NYV4 1490 aaPredicted RBP23.65■■□□□ 1.38
SEC11C-203ENST00000585864 CFAP70Q5T0N1 1121 aa23.65■■□□□ 1.38
SEC11C-203ENST00000585864 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
SEC11C-203ENST00000585864 FOXO3O43524 673 aa23.64■■□□□ 1.37
SEC11C-203ENST00000585864 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
SEC11C-203ENST00000585864 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
SEC11C-203ENST00000585864 KNDC1Q76NI1 1749 aa23.63■■□□□ 1.37
SEC11C-203ENST00000585864 POGKQ9P215 609 aa23.6■■□□□ 1.37
SEC11C-203ENST00000585864 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
SEC11C-203ENST00000585864 NUTM2FA1L443 756 aa23.59■■□□□ 1.37
SEC11C-203ENST00000585864 PSME1Q06323 249 aa23.59■■□□□ 1.37
SEC11C-203ENST00000585864 FNBP4Q8N3X1 1017 aaPredicted RBP23.58■■□□□ 1.37
SEC11C-203ENST00000585864 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
SEC11C-203ENST00000585864 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
SEC11C-203ENST00000585864 USP21Q9UK80 565 aa23.58■■□□□ 1.37
SEC11C-203ENST00000585864 TRPC5Q9UL62 973 aaPredicted RBP23.57■■□□□ 1.36
SEC11C-203ENST00000585864 PXDNQ92626 1479 aa23.56■■□□□ 1.36
SEC11C-203ENST00000585864 KRT28Q7Z3Y7 464 aa23.55■■□□□ 1.36
SEC11C-203ENST00000585864 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
SEC11C-203ENST00000585864 UPF1Q92900 1129 aaKnown RBP eCLIP23.54■■□□□ 1.36
SEC11C-203ENST00000585864 PHF8Q9UPP1 1060 aa23.54■■□□□ 1.36
SEC11C-203ENST00000585864 COL22A1Q8NFW1 1626 aaPredicted RBP23.54■■□□□ 1.36
SEC11C-203ENST00000585864 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
SEC11C-203ENST00000585864 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
SEC11C-203ENST00000585864 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
SEC11C-203ENST00000585864 FMN2Q9NZ56 1722 aa23.52■■□□□ 1.36
SEC11C-203ENST00000585864 EIF3AQ14152 1382 aaKnown RBP23.52■■□□□ 1.36
SEC11C-203ENST00000585864 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
SEC11C-203ENST00000585864 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
SEC11C-203ENST00000585864 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
SEC11C-203ENST00000585864 ANKARQ7Z5J8 1434 aa23.49■■□□□ 1.35
SEC11C-203ENST00000585864 SBNO1A3KN83 1393 aa23.46■■□□□ 1.35
SEC11C-203ENST00000585864 HAP1P54257 671 aaPredicted RBP23.46■■□□□ 1.35
SEC11C-203ENST00000585864 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
SEC11C-203ENST00000585864 ARHGEF10O15013 1369 aa23.44■■□□□ 1.34
SEC11C-203ENST00000585864 RGS12O14924 1447 aa23.43■■□□□ 1.34
SEC11C-203ENST00000585864 ATRNO75882 1429 aa23.42■■□□□ 1.34
SEC11C-203ENST00000585864 WASLO00401 505 aaPredicted RBP23.42■■□□□ 1.34
SEC11C-203ENST00000585864 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
SEC11C-203ENST00000585864 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
SEC11C-203ENST00000585864 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
SEC11C-203ENST00000585864 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
SEC11C-203ENST00000585864 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
SEC11C-203ENST00000585864 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
SEC11C-203ENST00000585864 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
SEC11C-203ENST00000585864 GJD4Q96KN9 370 aaPredicted RBP23.4■■□□□ 1.34
SEC11C-203ENST00000585864 BCL9LQ86UU0 1499 aa23.4■■□□□ 1.34
SEC11C-203ENST00000585864 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.33
SEC11C-203ENST00000585864 HIRIP3Q9BW71 556 aaPredicted RBP23.39■■□□□ 1.33
SEC11C-203ENST00000585864 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
SEC11C-203ENST00000585864 NGDNQ8NEJ9 315 aaKnown RBP23.35■■□□□ 1.33
SEC11C-203ENST00000585864 MARF1Q9Y4F3 1742 aaKnown RBP23.34■■□□□ 1.33
SEC11C-203ENST00000585864 SLIT2O94813 1529 aa23.33■■□□□ 1.33
SEC11C-203ENST00000585864 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.33
SEC11C-203ENST00000585864 RGPD8O14715 1765 aaPredicted RBP23.32■■□□□ 1.32
SEC11C-203ENST00000585864 CABLES1Q8TDN4 633 aa23.31■■□□□ 1.32
SEC11C-203ENST00000585864 VPS72Q15906 364 aa23.3■■□□□ 1.32
SEC11C-203ENST00000585864 NUDT16Q96DE0 195 aaKnown RBP23.3■■□□□ 1.32
SEC11C-203ENST00000585864 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
SEC11C-203ENST00000585864 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
SEC11C-203ENST00000585864 CDK19Q9BWU1 502 aa23.28■■□□□ 1.32
SEC11C-203ENST00000585864 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.28■■□□□ 1.32
SEC11C-203ENST00000585864 PAK3O75914 559 aaPredicted RBP23.27■■□□□ 1.32
SEC11C-203ENST00000585864 KIAA1210Q9ULL0 1709 aa23.26■■□□□ 1.31
SEC11C-203ENST00000585864 PLEKHG5O94827 1062 aa23.26■■□□□ 1.31
SEC11C-203ENST00000585864 CCDC61Q9Y6R9 512 aa23.26■■□□□ 1.31
SEC11C-203ENST00000585864 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
SEC11C-203ENST00000585864 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
SEC11C-203ENST00000585864 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
SEC11C-203ENST00000585864 ONECUT3O60422 494 aaPredicted RBP23.23■■□□□ 1.31
SEC11C-203ENST00000585864 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
SEC11C-203ENST00000585864 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
SEC11C-203ENST00000585864 NBPF1Q3BBV0 1214 aa23.21■■□□□ 1.31
SEC11C-203ENST00000585864 SEPT12Q8IYM1 358 aa23.2■■□□□ 1.3
SEC11C-203ENST00000585864 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
SEC11C-203ENST00000585864 ATP7BP35670 1465 aa23.19■■□□□ 1.3
SEC11C-203ENST00000585864 CENPJQ9HC77 1338 aaPredicted RBP23.19■■□□□ 1.3
SEC11C-203ENST00000585864 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
SEC11C-203ENST00000585864 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
SEC11C-203ENST00000585864 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
SEC11C-203ENST00000585864 L3MBTL2Q969R5 705 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms