RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 C14orf37Q86TY3 774 aa23.82■■□□□ 1.4
HMG20B-215ENST00000585741 GPRASP1Q5JY77 1395 aa23.81■■□□□ 1.4
HMG20B-215ENST00000585741 ATF3P18847 181 aa23.81■■□□□ 1.4
HMG20B-215ENST00000585741 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
HMG20B-215ENST00000585741 STK26Q9P289 416 aa23.8■■□□□ 1.4
HMG20B-215ENST00000585741 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
HMG20B-215ENST00000585741 EIF3AQ14152 1382 aaKnown RBP23.79■■□□□ 1.4
HMG20B-215ENST00000585741 METP08581 1390 aa23.78■■□□□ 1.4
HMG20B-215ENST00000585741 DCCP43146 1447 aa23.78■■□□□ 1.4
HMG20B-215ENST00000585741 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
HMG20B-215ENST00000585741 TRAK1Q9UPV9 953 aa23.77■■□□□ 1.4
HMG20B-215ENST00000585741 USP47Q96K76 1375 aa23.77■■□□□ 1.4
HMG20B-215ENST00000585741 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
HMG20B-215ENST00000585741 MST1RQ04912 1400 aa23.75■■□□□ 1.39
HMG20B-215ENST00000585741 YTHDC2Q9H6S0 1430 aaKnown RBP23.75■■□□□ 1.39
HMG20B-215ENST00000585741 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
HMG20B-215ENST00000585741 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
HMG20B-215ENST00000585741 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
HMG20B-215ENST00000585741 ASXL1Q8IXJ9 1541 aa23.73■■□□□ 1.39
HMG20B-215ENST00000585741 POGKQ9P215 609 aa23.72■■□□□ 1.39
HMG20B-215ENST00000585741 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
HMG20B-215ENST00000585741 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
HMG20B-215ENST00000585741 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
HMG20B-215ENST00000585741 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
HMG20B-215ENST00000585741 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
HMG20B-215ENST00000585741 CENPJQ9HC77 1338 aaPredicted RBP23.67■■□□□ 1.38
HMG20B-215ENST00000585741 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
HMG20B-215ENST00000585741 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
HMG20B-215ENST00000585741 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
HMG20B-215ENST00000585741 PRAM1Q96QH2 718 aa23.65■■□□□ 1.38
HMG20B-215ENST00000585741 SAFB2Q14151 953 aaKnown RBP eCLIP23.64■■□□□ 1.37
HMG20B-215ENST00000585741 NALCNQ8IZF0 1738 aa23.64■■□□□ 1.37
HMG20B-215ENST00000585741 DDX17Q92841 729 aaKnown RBP23.63■■□□□ 1.37
HMG20B-215ENST00000585741 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
HMG20B-215ENST00000585741 DLC1Q96QB1 1528 aa23.62■■□□□ 1.37
HMG20B-215ENST00000585741 TECPR2O15040 1411 aa23.61■■□□□ 1.37
HMG20B-215ENST00000585741 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
HMG20B-215ENST00000585741 NUTM2BA6NNL0 878 aaPredicted RBP23.61■■□□□ 1.37
HMG20B-215ENST00000585741 NUTM2EB1AL46 878 aaPredicted RBP23.61■■□□□ 1.37
HMG20B-215ENST00000585741 NUTM2AQ8IVF1 878 aaPredicted RBP23.61■■□□□ 1.37
HMG20B-215ENST00000585741 UPF1Q92900 1129 aaKnown RBP eCLIP23.6■■□□□ 1.37
HMG20B-215ENST00000585741 TMF1P82094 1093 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
HMG20B-215ENST00000585741 PNPLA6Q8IY17 1366 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 C1orf167Q5SNV9 1468 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 KNDC1Q76NI1 1749 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
HMG20B-215ENST00000585741 ROBO2Q9HCK4 1378 aa23.58■■□□□ 1.37
HMG20B-215ENST00000585741 AFF2P51816 1311 aa23.58■■□□□ 1.36
HMG20B-215ENST00000585741 ARHGEF28Q8N1W1 1705 aaKnown RBP23.57■■□□□ 1.36
HMG20B-215ENST00000585741 RXRBP28702 533 aa23.57■■□□□ 1.36
HMG20B-215ENST00000585741 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
HMG20B-215ENST00000585741 MINK1Q8N4C8 1332 aaPredicted RBP23.56■■□□□ 1.36
HMG20B-215ENST00000585741 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
HMG20B-215ENST00000585741 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
HMG20B-215ENST00000585741 PLEKHH1Q9ULM0 1364 aa23.53■■□□□ 1.36
HMG20B-215ENST00000585741 EVC2Q86UK5 1308 aa23.53■■□□□ 1.36
HMG20B-215ENST00000585741 TESK2Q96S53 571 aa23.52■■□□□ 1.36
HMG20B-215ENST00000585741 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
HMG20B-215ENST00000585741 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
HMG20B-215ENST00000585741 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
HMG20B-215ENST00000585741 SOS2Q07890 1332 aaPredicted RBP23.51■■□□□ 1.35
HMG20B-215ENST00000585741 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
HMG20B-215ENST00000585741 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
HMG20B-215ENST00000585741 RGS12O14924 1447 aa23.46■■□□□ 1.35
HMG20B-215ENST00000585741 QTRT2Q9H974 415 aaKnown RBP23.46■■□□□ 1.35
HMG20B-215ENST00000585741 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
HMG20B-215ENST00000585741 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
HMG20B-215ENST00000585741 WASLO00401 505 aaPredicted RBP23.43■■□□□ 1.34
HMG20B-215ENST00000585741 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
HMG20B-215ENST00000585741 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
HMG20B-215ENST00000585741 ADAMTS2O95450 1211 aa23.41■■□□□ 1.34
HMG20B-215ENST00000585741 CABP2Q9NPB3 220 aa23.41■■□□□ 1.34
HMG20B-215ENST00000585741 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
HMG20B-215ENST00000585741 COL22A1Q8NFW1 1626 aaPredicted RBP23.4■■□□□ 1.34
HMG20B-215ENST00000585741 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
HMG20B-215ENST00000585741 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.34
HMG20B-215ENST00000585741 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
HMG20B-215ENST00000585741 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
HMG20B-215ENST00000585741 PXDNQ92626 1479 aa23.37■■□□□ 1.33
HMG20B-215ENST00000585741 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
HMG20B-215ENST00000585741 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
HMG20B-215ENST00000585741 TULP4Q9NRJ4 1543 aa23.37■■□□□ 1.33
HMG20B-215ENST00000585741 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
HMG20B-215ENST00000585741 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
HMG20B-215ENST00000585741 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
HMG20B-215ENST00000585741 USP21Q9UK80 565 aa23.34■■□□□ 1.33
HMG20B-215ENST00000585741 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
HMG20B-215ENST00000585741 NUDT16Q96DE0 195 aaKnown RBP23.33■■□□□ 1.33
HMG20B-215ENST00000585741 ATRNO75882 1429 aa23.33■■□□□ 1.32
HMG20B-215ENST00000585741 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
HMG20B-215ENST00000585741 NPHP3Q7Z494 1330 aa23.32■■□□□ 1.32
HMG20B-215ENST00000585741 FOXO3O43524 673 aa23.3■■□□□ 1.32
HMG20B-215ENST00000585741 TRPC5Q9UL62 973 aaPredicted RBP23.3■■□□□ 1.32
HMG20B-215ENST00000585741 CCDC61Q9Y6R9 512 aa23.3■■□□□ 1.32
HMG20B-215ENST00000585741 BCL9LQ86UU0 1499 aa23.3■■□□□ 1.32
HMG20B-215ENST00000585741 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
HMG20B-215ENST00000585741 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
HMG20B-215ENST00000585741 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms