RNA–Protein interactions for RNA: ENST00000585534.1

CNTNAP1-202, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-202ENST00000585534 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
CNTNAP1-202ENST00000585534 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
CNTNAP1-202ENST00000585534 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
CNTNAP1-202ENST00000585534 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
CNTNAP1-202ENST00000585534 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
CNTNAP1-202ENST00000585534 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
CNTNAP1-202ENST00000585534 AFF2P51816 1311 aa17.21■□□□□ 0.34
CNTNAP1-202ENST00000585534 RXRBP28702 533 aa17.2■□□□□ 0.34
CNTNAP1-202ENST00000585534 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
CNTNAP1-202ENST00000585534 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CNTNAP1-202ENST00000585534 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
CNTNAP1-202ENST00000585534 PLEKHH1Q9ULM0 1364 aa17.19■□□□□ 0.34
CNTNAP1-202ENST00000585534 FOXO3O43524 673 aa17.19■□□□□ 0.34
CNTNAP1-202ENST00000585534 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
CNTNAP1-202ENST00000585534 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
CNTNAP1-202ENST00000585534 SIRT1Q96EB6 747 aa17.18■□□□□ 0.34
CNTNAP1-202ENST00000585534 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
CNTNAP1-202ENST00000585534 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
CNTNAP1-202ENST00000585534 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
CNTNAP1-202ENST00000585534 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
CNTNAP1-202ENST00000585534 HRCP23327 699 aa17.16■□□□□ 0.34
CNTNAP1-202ENST00000585534 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
CNTNAP1-202ENST00000585534 LAMC1P11047 1609 aa17.15■□□□□ 0.34
CNTNAP1-202ENST00000585534 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
CNTNAP1-202ENST00000585534 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
CNTNAP1-202ENST00000585534 MYOM2P54296 1465 aa17.15■□□□□ 0.34
CNTNAP1-202ENST00000585534 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
CNTNAP1-202ENST00000585534 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
CNTNAP1-202ENST00000585534 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
CNTNAP1-202ENST00000585534 PRAM1Q96QH2 718 aa17.13■□□□□ 0.33
CNTNAP1-202ENST00000585534 POGKQ9P215 609 aa17.13■□□□□ 0.33
CNTNAP1-202ENST00000585534 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
CNTNAP1-202ENST00000585534 USP21Q9UK80 565 aa17.1■□□□□ 0.33
CNTNAP1-202ENST00000585534 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
CNTNAP1-202ENST00000585534 KRT28Q7Z3Y7 464 aa17.09■□□□□ 0.33
CNTNAP1-202ENST00000585534 PXDNQ92626 1479 aa17.09■□□□□ 0.33
CNTNAP1-202ENST00000585534 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
CNTNAP1-202ENST00000585534 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
CNTNAP1-202ENST00000585534 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
CNTNAP1-202ENST00000585534 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
CNTNAP1-202ENST00000585534 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
CNTNAP1-202ENST00000585534 PSME1Q06323 249 aa17.06■□□□□ 0.32
CNTNAP1-202ENST00000585534 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
CNTNAP1-202ENST00000585534 TRPC5Q9UL62 973 aaPredicted RBP17.06■□□□□ 0.32
CNTNAP1-202ENST00000585534 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
CNTNAP1-202ENST00000585534 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
CNTNAP1-202ENST00000585534 COL22A1Q8NFW1 1626 aaPredicted RBP17.04■□□□□ 0.32
CNTNAP1-202ENST00000585534 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
CNTNAP1-202ENST00000585534 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP1-202ENST00000585534 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
CNTNAP1-202ENST00000585534 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
CNTNAP1-202ENST00000585534 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
CNTNAP1-202ENST00000585534 ADGRB1O14514 1584 aa17.02■□□□□ 0.32
CNTNAP1-202ENST00000585534 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
CNTNAP1-202ENST00000585534 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
CNTNAP1-202ENST00000585534 LMOD2Q6P5Q4 547 aa17.02■□□□□ 0.32
CNTNAP1-202ENST00000585534 RGS12O14924 1447 aa17.01■□□□□ 0.31
CNTNAP1-202ENST00000585534 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
CNTNAP1-202ENST00000585534 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
CNTNAP1-202ENST00000585534 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
CNTNAP1-202ENST00000585534 ATRNO75882 1429 aa16.97■□□□□ 0.31
CNTNAP1-202ENST00000585534 SBNO1A3KN83 1393 aa16.97■□□□□ 0.31
CNTNAP1-202ENST00000585534 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
CNTNAP1-202ENST00000585534 TNS3Q68CZ2 1445 aa16.96■□□□□ 0.31
CNTNAP1-202ENST00000585534 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
CNTNAP1-202ENST00000585534 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
CNTNAP1-202ENST00000585534 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
CNTNAP1-202ENST00000585534 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.3
CNTNAP1-202ENST00000585534 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
CNTNAP1-202ENST00000585534 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
CNTNAP1-202ENST00000585534 ARHGEF10O15013 1369 aa16.94■□□□□ 0.3
CNTNAP1-202ENST00000585534 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
CNTNAP1-202ENST00000585534 NGDNQ8NEJ9 315 aaKnown RBP16.94■□□□□ 0.3
CNTNAP1-202ENST00000585534 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
CNTNAP1-202ENST00000585534 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
CNTNAP1-202ENST00000585534 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
CNTNAP1-202ENST00000585534 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
CNTNAP1-202ENST00000585534 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
CNTNAP1-202ENST00000585534 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
CNTNAP1-202ENST00000585534 SLIT2O94813 1529 aa16.91■□□□□ 0.3
CNTNAP1-202ENST00000585534 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
CNTNAP1-202ENST00000585534 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
CNTNAP1-202ENST00000585534 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
CNTNAP1-202ENST00000585534 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
CNTNAP1-202ENST00000585534 VPS72Q15906 364 aa16.87■□□□□ 0.29
CNTNAP1-202ENST00000585534 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
CNTNAP1-202ENST00000585534 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
CNTNAP1-202ENST00000585534 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
CNTNAP1-202ENST00000585534 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
CNTNAP1-202ENST00000585534 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
CNTNAP1-202ENST00000585534 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
CNTNAP1-202ENST00000585534 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
CNTNAP1-202ENST00000585534 TRPM3Q9HCF6 1732 aaPredicted RBP16.84■□□□□ 0.29
CNTNAP1-202ENST00000585534 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
CNTNAP1-202ENST00000585534 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
CNTNAP1-202ENST00000585534 GLI3P10071 1580 aa16.83■□□□□ 0.28
CNTNAP1-202ENST00000585534 ACEP12821 1306 aa16.83■□□□□ 0.28
CNTNAP1-202ENST00000585534 ATP7BP35670 1465 aa16.83■□□□□ 0.28
CNTNAP1-202ENST00000585534 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
CNTNAP1-202ENST00000585534 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms