RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PTCH1Q13635 1447 aa33.47■■■□□ 2.95
LSM7-202ENST00000585395 NGLY1Q96IV0 654 aa33.47■■■□□ 2.95
LSM7-202ENST00000585395 PIK3C2GO75747 1445 aa33.46■■■□□ 2.95
LSM7-202ENST00000585395 MYOM2P54296 1465 aa33.45■■■□□ 2.95
LSM7-202ENST00000585395 ADGRL3Q9HAR2 1447 aa33.45■■■□□ 2.94
LSM7-202ENST00000585395 ATAD2Q6PL18 1390 aa33.44■■■□□ 2.94
LSM7-202ENST00000585395 STK26Q9P289 416 aa33.43■■■□□ 2.94
LSM7-202ENST00000585395 DDX17Q92841 729 aaKnown RBP33.42■■■□□ 2.94
LSM7-202ENST00000585395 ROBO2Q9HCK4 1378 aa33.42■■■□□ 2.94
LSM7-202ENST00000585395 NALCNQ8IZF0 1738 aa33.42■■■□□ 2.94
LSM7-202ENST00000585395 KDM2AQ9Y2K7 1162 aa33.41■■■□□ 2.94
LSM7-202ENST00000585395 LAMC1P11047 1609 aa33.4■■■□□ 2.94
LSM7-202ENST00000585395 TMEM132EQ6IEE7 984 aa33.39■■■□□ 2.94
LSM7-202ENST00000585395 STAC3Q96MF2 364 aa33.39■■■□□ 2.94
LSM7-202ENST00000585395 DCAF11Q8TEB1 546 aa33.38■■■□□ 2.93
LSM7-202ENST00000585395 ADAMTS2O95450 1211 aa33.37■■■□□ 2.93
LSM7-202ENST00000585395 NRXN1Q9ULB1 1477 aa33.36■■■□□ 2.93
LSM7-202ENST00000585395 PRAG1Q86YV5 1406 aa33.36■■■□□ 2.93
LSM7-202ENST00000585395 LRPPRCP42704 1394 aaKnown RBP33.35■■■□□ 2.93
LSM7-202ENST00000585395 CFAP70Q5T0N1 1121 aa33.34■■■□□ 2.93
LSM7-202ENST00000585395 C14orf93Q9H972 538 aaKnown RBP33.34■■■□□ 2.93
LSM7-202ENST00000585395 C1orf167Q5SNV9 1468 aa33.33■■■□□ 2.93
LSM7-202ENST00000585395 USP21Q9UK80 565 aa33.33■■■□□ 2.93
LSM7-202ENST00000585395 TRPC5Q9UL62 973 aaPredicted RBP33.33■■■□□ 2.93
LSM7-202ENST00000585395 KNDC1Q76NI1 1749 aa33.33■■■□□ 2.93
LSM7-202ENST00000585395 YTHDC2Q9H6S0 1430 aaKnown RBP33.32■■■□□ 2.92
LSM7-202ENST00000585395 ZRANB1Q9UGI0 708 aa33.31■■■□□ 2.92
LSM7-202ENST00000585395 SOS2Q07890 1332 aaPredicted RBP33.28■■■□□ 2.92
LSM7-202ENST00000585395 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
LSM7-202ENST00000585395 NEUROD1Q13562 356 aa33.28■■■□□ 2.92
LSM7-202ENST00000585395 FNBP4Q8N3X1 1017 aaPredicted RBP33.28■■■□□ 2.92
LSM7-202ENST00000585395 ABCC11Q96J66 1382 aa33.28■■■□□ 2.92
LSM7-202ENST00000585395 TECPR2O15040 1411 aa33.28■■■□□ 2.92
LSM7-202ENST00000585395 SIN3AQ96ST3 1273 aa33.26■■■□□ 2.91
LSM7-202ENST00000585395 EP400Q96L91 3159 aa33.25■■■□□ 2.91
LSM7-202ENST00000585395 WAPLQ7Z5K2 1190 aa33.25■■■□□ 2.91
LSM7-202ENST00000585395 ATRNO75882 1429 aa33.23■■■□□ 2.91
LSM7-202ENST00000585395 CCDC125Q86Z20 511 aa33.23■■■□□ 2.91
LSM7-202ENST00000585395 CCER1Q8TC90 406 aaPredicted RBP33.2■■■□□ 2.91
LSM7-202ENST00000585395 ORAI2Q96SN7 254 aa33.2■■■□□ 2.91
LSM7-202ENST00000585395 CDC42BPGQ6DT37 1551 aa33.19■■■□□ 2.9
LSM7-202ENST00000585395 COL22A1Q8NFW1 1626 aaPredicted RBP33.19■■■□□ 2.9
LSM7-202ENST00000585395 PLEKHH1Q9ULM0 1364 aa33.18■■■□□ 2.9
LSM7-202ENST00000585395 POGKQ9P215 609 aa33.17■■■□□ 2.9
LSM7-202ENST00000585395 TONSLQ96HA7 1378 aa33.17■■■□□ 2.9
LSM7-202ENST00000585395 SAFB2Q14151 953 aaKnown RBP eCLIP33.15■■■□□ 2.9
LSM7-202ENST00000585395 SIRT1Q96EB6 747 aa33.14■■■□□ 2.9
LSM7-202ENST00000585395 PRAM1Q96QH2 718 aa33.13■■■□□ 2.89
LSM7-202ENST00000585395 L3MBTL2Q969R5 705 aa33.12■■■□□ 2.89
LSM7-202ENST00000585395 TRAK1Q9UPV9 953 aa33.12■■■□□ 2.89
LSM7-202ENST00000585395 ADGRB1O14514 1584 aa33.12■■■□□ 2.89
LSM7-202ENST00000585395 NUTM2FA1L443 756 aa33.11■■■□□ 2.89
LSM7-202ENST00000585395 DLC1Q96QB1 1528 aa33.1■■■□□ 2.89
LSM7-202ENST00000585395 BCL9LQ86UU0 1499 aa33.1■■■□□ 2.89
LSM7-202ENST00000585395 ESCO1Q5FWF5 840 aa33.09■■■□□ 2.89
LSM7-202ENST00000585395 NPHP3Q7Z494 1330 aa33.07■■■□□ 2.88
LSM7-202ENST00000585395 FMN2Q9NZ56 1722 aa33.05■■■□□ 2.88
LSM7-202ENST00000585395 MARF1Q9Y4F3 1742 aaKnown RBP33.05■■■□□ 2.88
LSM7-202ENST00000585395 GJD4Q96KN9 370 aaPredicted RBP33.05■■■□□ 2.88
LSM7-202ENST00000585395 KIAA1210Q9ULL0 1709 aa33.03■■■□□ 2.88
LSM7-202ENST00000585395 TIMELESSQ9UNS1 1208 aa33.03■■■□□ 2.88
LSM7-202ENST00000585395 PXDNQ92626 1479 aa33.01■■■□□ 2.88
LSM7-202ENST00000585395 BLMP54132 1417 aaPredicted RBP32.98■■■□□ 2.87
LSM7-202ENST00000585395 MINK1Q8N4C8 1332 aaPredicted RBP32.98■■■□□ 2.87
LSM7-202ENST00000585395 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.97■■■□□ 2.87
LSM7-202ENST00000585395 ARHGEF28Q8N1W1 1705 aaKnown RBP32.97■■■□□ 2.87
LSM7-202ENST00000585395 HIRIP3Q9BW71 556 aaPredicted RBP32.96■■■□□ 2.87
LSM7-202ENST00000585395 KIF1AQ12756 1690 aa32.94■■■□□ 2.86
LSM7-202ENST00000585395 FOXO3O43524 673 aa32.93■■■□□ 2.86
LSM7-202ENST00000585395 ADGRB2O60241 1585 aa32.92■■■□□ 2.86
LSM7-202ENST00000585395 RGPD8O14715 1765 aaPredicted RBP32.92■■■□□ 2.86
LSM7-202ENST00000585395 UNC5CLQ8IV45 518 aa32.92■■■□□ 2.86
LSM7-202ENST00000585395 EIF3AQ14152 1382 aaKnown RBP32.91■■■□□ 2.86
LSM7-202ENST00000585395 RALGAPBQ86X10 1494 aa32.9■■■□□ 2.86
LSM7-202ENST00000585395 XPCQ01831 940 aaPredicted RBP32.89■■■□□ 2.86
LSM7-202ENST00000585395 NBPF1Q3BBV0 1214 aa32.89■■■□□ 2.86
LSM7-202ENST00000585395 GLI3P10071 1580 aa32.88■■■□□ 2.85
LSM7-202ENST00000585395 SLIT2O94813 1529 aa32.88■■■□□ 2.85
LSM7-202ENST00000585395 PHF8Q9UPP1 1060 aa32.86■■■□□ 2.85
LSM7-202ENST00000585395 ANKARQ7Z5J8 1434 aa32.85■■■□□ 2.85
LSM7-202ENST00000585395 SF3B2Q13435 895 aaKnown RBP32.85■■■□□ 2.85
LSM7-202ENST00000585395 WASLO00401 505 aaPredicted RBP32.83■■■□□ 2.85
LSM7-202ENST00000585395 DEFB132Q7Z7B7 95 aa32.83■■■□□ 2.85
LSM7-202ENST00000585395 LRP5O75197 1615 aa32.82■■■□□ 2.84
LSM7-202ENST00000585395 TRPM1Q7Z4N2 1603 aa32.82■■■□□ 2.84
LSM7-202ENST00000585395 BRWD3Q6RI45 1802 aa32.81■■■□□ 2.84
LSM7-202ENST00000585395 TULP4Q9NRJ4 1543 aa32.81■■■□□ 2.84
LSM7-202ENST00000585395 ROCK2O75116 1388 aaKnown RBP32.81■■■□□ 2.84
LSM7-202ENST00000585395 SPATA31A3Q5VYP0 1347 aa32.8■■■□□ 2.84
LSM7-202ENST00000585395 KRT28Q7Z3Y7 464 aa32.79■■■□□ 2.84
LSM7-202ENST00000585395 USP32Q8NFA0 1604 aa32.79■■■□□ 2.84
LSM7-202ENST00000585395 PSME1Q06323 249 aa32.78■■■□□ 2.84
LSM7-202ENST00000585395 PMFBP1Q8TBY8 1022 aa32.78■■■□□ 2.84
LSM7-202ENST00000585395 SEPT12Q8IYM1 358 aa32.77■■■□□ 2.84
LSM7-202ENST00000585395 CENPJQ9HC77 1338 aaPredicted RBP32.77■■■□□ 2.84
LSM7-202ENST00000585395 NBPF8Q3BBV2 869 aa32.76■■■□□ 2.83
LSM7-202ENST00000585395 ITSN1Q15811 1721 aa32.74■■■□□ 2.83
LSM7-202ENST00000585395 VPS72Q15906 364 aa32.74■■■□□ 2.83
LSM7-202ENST00000585395 ONECUT3O60422 494 aaPredicted RBP32.73■■■□□ 2.83
LSM7-202ENST00000585395 QRICH2Q9H0J4 1663 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms