RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 DLC1Q96QB1 1528 aa19.13■□□□□ 0.65
CHAF1A-202ENST00000585371 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
CHAF1A-202ENST00000585371 JCADQ9P266 1359 aa19.11■□□□□ 0.65
CHAF1A-202ENST00000585371 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
CHAF1A-202ENST00000585371 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
CHAF1A-202ENST00000585371 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
CHAF1A-202ENST00000585371 CADPS2Q86UW7 1296 aa19.09■□□□□ 0.65
CHAF1A-202ENST00000585371 STK26Q9P289 416 aa19.09■□□□□ 0.65
CHAF1A-202ENST00000585371 COL16A1Q07092 1604 aaPredicted RBP19.09■□□□□ 0.65
CHAF1A-202ENST00000585371 C19orf44Q9H6X5 657 aa19.08■□□□□ 0.64
CHAF1A-202ENST00000585371 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
CHAF1A-202ENST00000585371 ATF3P18847 181 aa19.07■□□□□ 0.64
CHAF1A-202ENST00000585371 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
CHAF1A-202ENST00000585371 POTEAQ6S8J7 498 aa19.06■□□□□ 0.64
CHAF1A-202ENST00000585371 AHDC1Q5TGY3 1603 aaPredicted RBP19.06■□□□□ 0.64
CHAF1A-202ENST00000585371 ROCK2O75116 1388 aaKnown RBP19.05■□□□□ 0.64
CHAF1A-202ENST00000585371 DCCP43146 1447 aa19.04■□□□□ 0.64
CHAF1A-202ENST00000585371 WAPLQ7Z5K2 1190 aa19.04■□□□□ 0.64
CHAF1A-202ENST00000585371 TRAK1Q9UPV9 953 aa19.04■□□□□ 0.64
CHAF1A-202ENST00000585371 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
CHAF1A-202ENST00000585371 SHPRHQ149N8 1683 aa19.02■□□□□ 0.64
CHAF1A-202ENST00000585371 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
CHAF1A-202ENST00000585371 PRAM1Q96QH2 718 aa19■□□□□ 0.63
CHAF1A-202ENST00000585371 QRICH2Q9H0J4 1663 aa19■□□□□ 0.63
CHAF1A-202ENST00000585371 ADGRB2O60241 1585 aa18.99■□□□□ 0.63
CHAF1A-202ENST00000585371 CDC42BPGQ6DT37 1551 aa18.98■□□□□ 0.63
CHAF1A-202ENST00000585371 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
CHAF1A-202ENST00000585371 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
CHAF1A-202ENST00000585371 LRP6O75581 1613 aa18.96■□□□□ 0.63
CHAF1A-202ENST00000585371 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
CHAF1A-202ENST00000585371 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
CHAF1A-202ENST00000585371 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHAF1A-202ENST00000585371 ZNF772Q68DY9 489 aaPredicted RBP18.94■□□□□ 0.62
CHAF1A-202ENST00000585371 POGKQ9P215 609 aa18.94■□□□□ 0.62
CHAF1A-202ENST00000585371 RGPD8O14715 1765 aaPredicted RBP18.93■□□□□ 0.62
CHAF1A-202ENST00000585371 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
CHAF1A-202ENST00000585371 MST1RQ04912 1400 aa18.93■□□□□ 0.62
CHAF1A-202ENST00000585371 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
CHAF1A-202ENST00000585371 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
CHAF1A-202ENST00000585371 MINK1Q8N4C8 1332 aaPredicted RBP18.91■□□□□ 0.62
CHAF1A-202ENST00000585371 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
CHAF1A-202ENST00000585371 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
CHAF1A-202ENST00000585371 USP47Q96K76 1375 aa18.89■□□□□ 0.61
CHAF1A-202ENST00000585371 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
CHAF1A-202ENST00000585371 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
CHAF1A-202ENST00000585371 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
CHAF1A-202ENST00000585371 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
CHAF1A-202ENST00000585371 TESK2Q96S53 571 aa18.86■□□□□ 0.61
CHAF1A-202ENST00000585371 ST20-MTHFSA0A0A6YYL1 179 aa18.85■□□□□ 0.61
CHAF1A-202ENST00000585371 WASLO00401 505 aaPredicted RBP18.85■□□□□ 0.61
CHAF1A-202ENST00000585371 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
CHAF1A-202ENST00000585371 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
CHAF1A-202ENST00000585371 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
CHAF1A-202ENST00000585371 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
CHAF1A-202ENST00000585371 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
CHAF1A-202ENST00000585371 ATP7BP35670 1465 aa18.83■□□□□ 0.6
CHAF1A-202ENST00000585371 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
CHAF1A-202ENST00000585371 CDK12Q9NYV4 1490 aaPredicted RBP18.82■□□□□ 0.6
CHAF1A-202ENST00000585371 ANKARQ7Z5J8 1434 aa18.82■□□□□ 0.6
CHAF1A-202ENST00000585371 RXRBP28702 533 aa18.81■□□□□ 0.6
CHAF1A-202ENST00000585371 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
CHAF1A-202ENST00000585371 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
CHAF1A-202ENST00000585371 AFF2P51816 1311 aa18.8■□□□□ 0.6
CHAF1A-202ENST00000585371 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
CHAF1A-202ENST00000585371 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
CHAF1A-202ENST00000585371 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
CHAF1A-202ENST00000585371 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
CHAF1A-202ENST00000585371 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHAF1A-202ENST00000585371 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.6
CHAF1A-202ENST00000585371 EVC2Q86UK5 1308 aa18.76■□□□□ 0.59
CHAF1A-202ENST00000585371 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
CHAF1A-202ENST00000585371 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHAF1A-202ENST00000585371 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
CHAF1A-202ENST00000585371 CABP2Q9NPB3 220 aa18.76■□□□□ 0.59
CHAF1A-202ENST00000585371 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
CHAF1A-202ENST00000585371 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
CHAF1A-202ENST00000585371 ESCO1Q5FWF5 840 aa18.73■□□□□ 0.59
CHAF1A-202ENST00000585371 SRPK2P78362 688 aaKnown RBP18.72■□□□□ 0.59
CHAF1A-202ENST00000585371 PUS7Q96PZ0 661 aaKnown RBP18.72■□□□□ 0.59
CHAF1A-202ENST00000585371 AKAP12Q02952 1782 aa18.71■□□□□ 0.59
CHAF1A-202ENST00000585371 MYOM1P52179 1685 aa18.71■□□□□ 0.59
CHAF1A-202ENST00000585371 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
CHAF1A-202ENST00000585371 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
CHAF1A-202ENST00000585371 CCDC61Q9Y6R9 512 aa18.71■□□□□ 0.59
CHAF1A-202ENST00000585371 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
CHAF1A-202ENST00000585371 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
CHAF1A-202ENST00000585371 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
CHAF1A-202ENST00000585371 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
CHAF1A-202ENST00000585371 PXDNQ92626 1479 aa18.7■□□□□ 0.58
CHAF1A-202ENST00000585371 PPIP5K1Q6PFW1 1433 aa18.69■□□□□ 0.58
CHAF1A-202ENST00000585371 PLEKHG3A1L390 1219 aa18.69■□□□□ 0.58
CHAF1A-202ENST00000585371 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
CHAF1A-202ENST00000585371 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
CHAF1A-202ENST00000585371 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 C11orf95C9JLR9 678 aaPredicted RBP18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 ADAMTS2O95450 1211 aa18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 TMF1P82094 1093 aa18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 PMFBP1Q8TBY8 1022 aa18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
CHAF1A-202ENST00000585371 RGS12O14924 1447 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms