RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 NUTM2FA1L443 756 aa18.8■□□□□ 0.6
CUEDC1-213ENST00000585294 CFAP70Q5T0N1 1121 aa18.8■□□□□ 0.6
CUEDC1-213ENST00000585294 C14orf93Q9H972 538 aaKnown RBP18.8■□□□□ 0.6
CUEDC1-213ENST00000585294 ABCC11Q96J66 1382 aa18.8■□□□□ 0.6
CUEDC1-213ENST00000585294 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
CUEDC1-213ENST00000585294 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
CUEDC1-213ENST00000585294 IFT172Q9UG01 1749 aa18.79■□□□□ 0.6
CUEDC1-213ENST00000585294 AFF2P51816 1311 aa18.78■□□□□ 0.6
CUEDC1-213ENST00000585294 TECPR2O15040 1411 aa18.77■□□□□ 0.6
CUEDC1-213ENST00000585294 ADAMTS2O95450 1211 aa18.77■□□□□ 0.6
CUEDC1-213ENST00000585294 C8orf37Q96NL8 207 aa18.77■□□□□ 0.6
CUEDC1-213ENST00000585294 YTHDC2Q9H6S0 1430 aaKnown RBP18.76■□□□□ 0.59
CUEDC1-213ENST00000585294 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
CUEDC1-213ENST00000585294 FOXO3O43524 673 aa18.75■□□□□ 0.59
CUEDC1-213ENST00000585294 RXRBP28702 533 aa18.75■□□□□ 0.59
CUEDC1-213ENST00000585294 LAMC1P11047 1609 aa18.74■□□□□ 0.59
CUEDC1-213ENST00000585294 CDC42BPGQ6DT37 1551 aa18.73■□□□□ 0.59
CUEDC1-213ENST00000585294 NRXN1Q9ULB1 1477 aa18.73■□□□□ 0.59
CUEDC1-213ENST00000585294 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
CUEDC1-213ENST00000585294 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
CUEDC1-213ENST00000585294 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
CUEDC1-213ENST00000585294 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
CUEDC1-213ENST00000585294 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
CUEDC1-213ENST00000585294 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
CUEDC1-213ENST00000585294 MYOM2P54296 1465 aa18.71■□□□□ 0.59
CUEDC1-213ENST00000585294 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
CUEDC1-213ENST00000585294 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
CUEDC1-213ENST00000585294 HRCP23327 699 aa18.68■□□□□ 0.58
CUEDC1-213ENST00000585294 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
CUEDC1-213ENST00000585294 PXDNQ92626 1479 aa18.68■□□□□ 0.58
CUEDC1-213ENST00000585294 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
CUEDC1-213ENST00000585294 UPF1Q92900 1129 aaKnown RBP eCLIP18.66■□□□□ 0.58
CUEDC1-213ENST00000585294 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
CUEDC1-213ENST00000585294 POGKQ9P215 609 aa18.65■□□□□ 0.58
CUEDC1-213ENST00000585294 TRAK1Q9UPV9 953 aa18.65■□□□□ 0.58
CUEDC1-213ENST00000585294 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
CUEDC1-213ENST00000585294 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CUEDC1-213ENST00000585294 FNBP4Q8N3X1 1017 aaPredicted RBP18.63■□□□□ 0.57
CUEDC1-213ENST00000585294 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
CUEDC1-213ENST00000585294 FMN2Q9NZ56 1722 aa18.63■□□□□ 0.57
CUEDC1-213ENST00000585294 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
CUEDC1-213ENST00000585294 COL22A1Q8NFW1 1626 aaPredicted RBP18.61■□□□□ 0.57
CUEDC1-213ENST00000585294 ADGRB1O14514 1584 aa18.61■□□□□ 0.57
CUEDC1-213ENST00000585294 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
CUEDC1-213ENST00000585294 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
CUEDC1-213ENST00000585294 RGS12O14924 1447 aa18.6■□□□□ 0.57
CUEDC1-213ENST00000585294 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
CUEDC1-213ENST00000585294 PLEKHG5O94827 1062 aa18.59■□□□□ 0.57
CUEDC1-213ENST00000585294 PMFBP1Q8TBY8 1022 aa18.59■□□□□ 0.57
CUEDC1-213ENST00000585294 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.56
CUEDC1-213ENST00000585294 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
CUEDC1-213ENST00000585294 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
CUEDC1-213ENST00000585294 BCL9LQ86UU0 1499 aa18.57■□□□□ 0.56
CUEDC1-213ENST00000585294 RGPD8O14715 1765 aaPredicted RBP18.56■□□□□ 0.56
CUEDC1-213ENST00000585294 PSME1Q06323 249 aa18.56■□□□□ 0.56
CUEDC1-213ENST00000585294 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
CUEDC1-213ENST00000585294 ATRNO75882 1429 aa18.55■□□□□ 0.56
CUEDC1-213ENST00000585294 PRR36Q9H6K5 1346 aa18.54■□□□□ 0.56
CUEDC1-213ENST00000585294 LMOD2Q6P5Q4 547 aa18.54■□□□□ 0.56
CUEDC1-213ENST00000585294 KIF1AQ12756 1690 aa18.54■□□□□ 0.56
CUEDC1-213ENST00000585294 USP32Q8NFA0 1604 aa18.52■□□□□ 0.56
CUEDC1-213ENST00000585294 WASLO00401 505 aaPredicted RBP18.52■□□□□ 0.56
CUEDC1-213ENST00000585294 TNS3Q68CZ2 1445 aa18.51■□□□□ 0.55
CUEDC1-213ENST00000585294 ANKARQ7Z5J8 1434 aa18.51■□□□□ 0.55
CUEDC1-213ENST00000585294 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
CUEDC1-213ENST00000585294 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
CUEDC1-213ENST00000585294 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
CUEDC1-213ENST00000585294 NBPF1Q3BBV0 1214 aa18.49■□□□□ 0.55
CUEDC1-213ENST00000585294 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
CUEDC1-213ENST00000585294 ADGRB2O60241 1585 aa18.49■□□□□ 0.55
CUEDC1-213ENST00000585294 SLIT2O94813 1529 aa18.47■□□□□ 0.55
CUEDC1-213ENST00000585294 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
CUEDC1-213ENST00000585294 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
CUEDC1-213ENST00000585294 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
CUEDC1-213ENST00000585294 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
CUEDC1-213ENST00000585294 NUDT16Q96DE0 195 aaKnown RBP18.45■□□□□ 0.54
CUEDC1-213ENST00000585294 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
CUEDC1-213ENST00000585294 CDK19Q9BWU1 502 aa18.44■□□□□ 0.54
CUEDC1-213ENST00000585294 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
CUEDC1-213ENST00000585294 GPRASP1Q5JY77 1395 aa18.43■□□□□ 0.54
CUEDC1-213ENST00000585294 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
CUEDC1-213ENST00000585294 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
CUEDC1-213ENST00000585294 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
CUEDC1-213ENST00000585294 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
CUEDC1-213ENST00000585294 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
CUEDC1-213ENST00000585294 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
CUEDC1-213ENST00000585294 GLI3P10071 1580 aa18.4■□□□□ 0.54
CUEDC1-213ENST00000585294 VPS72Q15906 364 aa18.4■□□□□ 0.54
CUEDC1-213ENST00000585294 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
CUEDC1-213ENST00000585294 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.53
CUEDC1-213ENST00000585294 ATP7BP35670 1465 aa18.39■□□□□ 0.53
CUEDC1-213ENST00000585294 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
CUEDC1-213ENST00000585294 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
CUEDC1-213ENST00000585294 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
CUEDC1-213ENST00000585294 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
CUEDC1-213ENST00000585294 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
CUEDC1-213ENST00000585294 ACEP12821 1306 aa18.36■□□□□ 0.53
CUEDC1-213ENST00000585294 NBPF8Q3BBV2 869 aa18.36■□□□□ 0.53
CUEDC1-213ENST00000585294 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
CUEDC1-213ENST00000585294 CCDC61Q9Y6R9 512 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms